RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 ERASQ7Z444 233 aa9.35□□□□□ -0.91
TRAM1-204ENST00000521049 FAM19A1Q7Z5A9 133 aa9.35□□□□□ -0.91
TRAM1-204ENST00000521049 LINC00337Q8N6G1 96 aa9.35□□□□□ -0.91
TRAM1-204ENST00000521049 LINC01546A6NGU7 62 aa9.34□□□□□ -0.91
TRAM1-204ENST00000521049 SCO1O75880 301 aa9.34□□□□□ -0.91
TRAM1-204ENST00000521049 FA2HQ7L5A8 372 aa9.34□□□□□ -0.91
TRAM1-204ENST00000521049 C3orf22Q8N5N4 141 aa9.34□□□□□ -0.91
TRAM1-204ENST00000521049 TMEM126AQ9H061 195 aa9.34□□□□□ -0.91
TRAM1-204ENST00000521049 CRCT1Q9UGL9 99 aa9.33□□□□□ -0.92
TRAM1-204ENST00000521049 C18orf32Q8TCD1 76 aa9.32□□□□□ -0.92
TRAM1-204ENST00000521049 SCGB3A1Q96QR1 104 aa9.32□□□□□ -0.92
TRAM1-204ENST00000521049 TMEM238C9JI98 176 aa9.31□□□□□ -0.92
TRAM1-204ENST00000521049 M0R378 163 aa9.31□□□□□ -0.92
TRAM1-204ENST00000521049 ATP5LO75964 103 aa9.31□□□□□ -0.92
TRAM1-204ENST00000521049 KRTAP13-3Q3SY46 172 aa9.31□□□□□ -0.92
TRAM1-204ENST00000521049 FSIP2Q5CZC0 6907 aa9.3□□□□□ -0.92
TRAM1-204ENST00000521049 LINC01549A6NIU2 74 aa9.3□□□□□ -0.92
TRAM1-204ENST00000521049 SPINK8P0C7L1 97 aa9.3□□□□□ -0.92
TRAM1-204ENST00000521049 VPREB1P12018 145 aa9.3□□□□□ -0.92
TRAM1-204ENST00000521049 LINC00614P0C842 121 aa9.29□□□□□ -0.92
TRAM1-204ENST00000521049 RPL24P83731 157 aaKnown RBP9.29□□□□□ -0.92
TRAM1-204ENST00000521049 URB1-AS1Q96HZ7 61 aa9.29□□□□□ -0.92
TRAM1-204ENST00000521049 CST9LQ9H4G1 147 aa9.29□□□□□ -0.92
TRAM1-204ENST00000521049 PFN2P35080 140 aa9.28□□□□□ -0.92
TRAM1-204ENST00000521049 SEC61BP60468 96 aaKnown RBP9.27□□□□□ -0.93
TRAM1-204ENST00000521049 KRTAP4-1Q9BYQ7 146 aa9.27□□□□□ -0.93
TRAM1-204ENST00000521049 SND1-IT1Q9HBX3 110 aa9.27□□□□□ -0.93
TRAM1-204ENST00000521049 H3BRM9 83 aa9.26□□□□□ -0.93
TRAM1-204ENST00000521049 SPRR4Q96PI1 79 aa9.26□□□□□ -0.93
TRAM1-204ENST00000521049 HIGD2AQ9BW72 106 aa9.26□□□□□ -0.93
TRAM1-204ENST00000521049 COX17Q14061 63 aa9.25□□□□□ -0.93
TRAM1-204ENST00000521049 A0A096LNJ9 63 aa9.24□□□□□ -0.93
TRAM1-204ENST00000521049 COLCA2A8K830 154 aa9.24□□□□□ -0.93
TRAM1-204ENST00000521049 HBDP02042 147 aa9.24□□□□□ -0.93
TRAM1-204ENST00000521049 TRGC2P03986 189 aa9.24□□□□□ -0.93
TRAM1-204ENST00000521049 PMVKQ15126 192 aa9.24□□□□□ -0.93
TRAM1-204ENST00000521049 PMCHL1Q16048 86 aa9.24□□□□□ -0.93
TRAM1-204ENST00000521049 ERG28Q9UKR5 140 aa9.24□□□□□ -0.93
TRAM1-204ENST00000521049 IGLV5-39A0A0G2JS06 123 aa9.23□□□□□ -0.93
TRAM1-204ENST00000521049 SPINK1P00995 79 aa9.23□□□□□ -0.93
TRAM1-204ENST00000521049 ZNF706Q9Y5V0 76 aaPredicted RBP9.23□□□□□ -0.93
TRAM1-204ENST00000521049 Q8NBF4 154 aa9.22□□□□□ -0.93
TRAM1-204ENST00000521049 CHCHD1Q96BP2 118 aaKnown RBP9.22□□□□□ -0.93
TRAM1-204ENST00000521049 DAND5Q8N907 189 aa9.21□□□□□ -0.94
TRAM1-204ENST00000521049 Q8NDZ9 215 aa9.21□□□□□ -0.94
TRAM1-204ENST00000521049 BAGE3Q86Y29 109 aa9.2□□□□□ -0.94
TRAM1-204ENST00000521049 IGLC3P0DOY3 106 aa9.19□□□□□ -0.94
TRAM1-204ENST00000521049 NDUFA6P56556 154 aa9.19□□□□□ -0.94
TRAM1-204ENST00000521049 HSBP1O75506 76 aa9.17□□□□□ -0.94
TRAM1-204ENST00000521049 ZNF625Q96I27 306 aaPredicted RBP9.17□□□□□ -0.94
TRAM1-204ENST00000521049 NDUFA12Q9UI09 145 aa9.17□□□□□ -0.94
TRAM1-204ENST00000521049 SFTA2Q6UW10 78 aa9.16□□□□□ -0.94
TRAM1-204ENST00000521049 ZNF22P17026 224 aaPredicted RBP9.15□□□□□ -0.94
TRAM1-204ENST00000521049 RPS29P62273 56 aaKnown RBP9.15□□□□□ -0.94
TRAM1-204ENST00000521049 SERF1AO75920 110 aa9.14□□□□□ -0.95
TRAM1-204ENST00000521049 XP32Q5T750 250 aa9.14□□□□□ -0.95
TRAM1-204ENST00000521049 FAM19A2Q8N3H0 131 aa9.14□□□□□ -0.95
TRAM1-204ENST00000521049 SMCR5Q8TEV8 140 aa9.14□□□□□ -0.95
TRAM1-204ENST00000521049 LINC00310P59036 64 aa9.13□□□□□ -0.95
TRAM1-204ENST00000521049 IFI27L1Q96BM0 104 aa9.13□□□□□ -0.95
TRAM1-204ENST00000521049 PRYO14603 147 aa9.12□□□□□ -0.95
TRAM1-204ENST00000521049 SPRR1AP35321 89 aa9.12□□□□□ -0.95
TRAM1-204ENST00000521049 LINC00158P58513 81 aa9.12□□□□□ -0.95
TRAM1-204ENST00000521049 LINC00483Q53H64 154 aa9.12□□□□□ -0.95
TRAM1-204ENST00000521049 Q8N377 158 aa9.12□□□□□ -0.95
TRAM1-204ENST00000521049 SSBP3-AS1Q7Z2R9 100 aa9.11□□□□□ -0.95
TRAM1-204ENST00000521049 CHTOPQ9Y3Y2 248 aaKnown RBP9.11□□□□□ -0.95
TRAM1-204ENST00000521049 TRAV12-1A0A0B4J245 112 aa9.1□□□□□ -0.95
TRAM1-204ENST00000521049 C11orf86A6NJI1 115 aa9.1□□□□□ -0.95
TRAM1-204ENST00000521049 SLC25A20O43772 301 aa9.1□□□□□ -0.95
TRAM1-204ENST00000521049 KCNQ1DNQ9H478 68 aa9.1□□□□□ -0.95
TRAM1-204ENST00000521049 KRTAP4-16G5E9R7 235 aaPredicted RBP9.09□□□□□ -0.95
TRAM1-204ENST00000521049 HIST1H2BKO60814 126 aa9.09□□□□□ -0.95
TRAM1-204ENST00000521049 LEPROTL1O95214 131 aa9.09□□□□□ -0.95
TRAM1-204ENST00000521049 HIST1H2BJP06899 126 aa9.09□□□□□ -0.95
TRAM1-204ENST00000521049 HIST1H2BOP23527 126 aa9.09□□□□□ -0.95
TRAM1-204ENST00000521049 HIST1H2BBP33778 126 aa9.09□□□□□ -0.95
TRAM1-204ENST00000521049 HIST1H2BDP58876 126 aa9.09□□□□□ -0.95
TRAM1-204ENST00000521049 HIST1H2BCP62807 126 aa9.09□□□□□ -0.95
TRAM1-204ENST00000521049 HIST2H2BEQ16778 126 aa9.09□□□□□ -0.95
TRAM1-204ENST00000521049 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.09□□□□□ -0.95
TRAM1-204ENST00000521049 HIST1H2BHQ93079 126 aa9.09□□□□□ -0.95
TRAM1-204ENST00000521049 HIST1H2BNQ99877 126 aa9.09□□□□□ -0.95
TRAM1-204ENST00000521049 HIST1H2BMQ99879 126 aa9.09□□□□□ -0.95
TRAM1-204ENST00000521049 S100A1P23297 94 aa9.08□□□□□ -0.96
TRAM1-204ENST00000521049 ETDCA0A1B0GVM5 59 aa9.07□□□□□ -0.96
TRAM1-204ENST00000521049 KRTAP19-2Q3LHN2 52 aa9.07□□□□□ -0.96
TRAM1-204ENST00000521049 TMEM170BQ5T4T1 132 aa9.07□□□□□ -0.96
TRAM1-204ENST00000521049 GAGE2AQ6NT46 116 aa9.07□□□□□ -0.96
TRAM1-204ENST00000521049 H0Y8G0 127 aa9.06□□□□□ -0.96
TRAM1-204ENST00000521049 ATP6V1G1O75348 118 aa9.06□□□□□ -0.96
TRAM1-204ENST00000521049 CFC1BP0CG36 223 aa9.06□□□□□ -0.96
TRAM1-204ENST00000521049 MOBPQ13875 183 aa9.06□□□□□ -0.96
TRAM1-204ENST00000521049 HSPB8Q9UJY1 196 aa9.06□□□□□ -0.96
TRAM1-204ENST00000521049 A0A0U1RRA0 63 aa9.05□□□□□ -0.96
TRAM1-204ENST00000521049 FABP4P15090 132 aa9.05□□□□□ -0.96
TRAM1-204ENST00000521049 MT1HP80294 61 aa9.05□□□□□ -0.96
TRAM1-204ENST00000521049 IGLV9-49A0A0B4J1Y8 123 aa9.04□□□□□ -0.96
TRAM1-204ENST00000521049 BOD1L2Q8IYS8 172 aa9.04□□□□□ -0.96
TRAM1-204ENST00000521049 TMEM223A0PJW6 202 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms