RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 ESRGQ1W209 222 aa6.95□□□□□ -1.3
MCF2-209ENST00000520602 SYCNQ0VAF6 134 aa6.94□□□□□ -1.3
MCF2-209ENST00000520602 UBL5Q9BZL1 73 aa6.94□□□□□ -1.3
MCF2-209ENST00000520602 KLK5Q9Y337 293 aaPredicted RBP6.94□□□□□ -1.3
MCF2-209ENST00000520602 PDZD2O15018 2839 aa6.93□□□□□ -1.3
MCF2-209ENST00000520602 FAM236AA0A1B0GUQ0 79 aa6.93□□□□□ -1.3
MCF2-209ENST00000520602 FAM236BA0A1B0GV22 79 aa6.93□□□□□ -1.3
MCF2-209ENST00000520602 NBPF19A0A087WUL8 3843 aa6.92□□□□□ -1.3
MCF2-209ENST00000520602 JMJD7-PLA2G4BH0Y9G9 81 aa6.92□□□□□ -1.3
MCF2-209ENST00000520602 COX7BP24311 80 aa6.92□□□□□ -1.3
MCF2-209ENST00000520602 ENHOQ6UWT2 76 aa6.92□□□□□ -1.3
MCF2-209ENST00000520602 Q6ZQY7 126 aa6.92□□□□□ -1.3
MCF2-209ENST00000520602 RBM3P98179 157 aaKnown RBP6.92□□□□□ -1.3
MCF2-209ENST00000520602 TRBV10-3A0A0K0K1G6 114 aa6.91□□□□□ -1.3
MCF2-209ENST00000520602 LINC00643Q86TS7 51 aa6.91□□□□□ -1.3
MCF2-209ENST00000520602 TRAV23DV6A0A075B6W5 121 aa6.91□□□□□ -1.3
MCF2-209ENST00000520602 B5MCH6 92 aa6.91□□□□□ -1.3
MCF2-209ENST00000520602 LINC01561Q8N1V8 128 aa6.91□□□□□ -1.3
MCF2-209ENST00000520602 IGKV2-24A0A0C4DH68 120 aa6.91□□□□□ -1.3
MCF2-209ENST00000520602 SDIM1Q6ZPB5 146 aa6.9□□□□□ -1.3
MCF2-209ENST00000520602 Q6ZRU5 148 aa6.9□□□□□ -1.3
MCF2-209ENST00000520602 BAHCC1Q9P281 2608 aa6.9□□□□□ -1.31
MCF2-209ENST00000520602 M0QXV9 152 aa6.9□□□□□ -1.31
MCF2-209ENST00000520602 Q8N814 137 aa6.9□□□□□ -1.31
MCF2-209ENST00000520602 ETDCA0A1B0GVM5 59 aa6.89□□□□□ -1.31
MCF2-209ENST00000520602 NDUFV3P56181 108 aaKnown RBP6.89□□□□□ -1.31
MCF2-209ENST00000520602 OTOGQ6ZRI0 2925 aa6.89□□□□□ -1.31
MCF2-209ENST00000520602 NDUFC2O95298 119 aa6.89□□□□□ -1.31
MCF2-209ENST00000520602 UBE2BP63146 152 aa6.89□□□□□ -1.31
MCF2-209ENST00000520602 C6orf48Q9UBA6 75 aa6.89□□□□□ -1.31
MCF2-209ENST00000520602 ZFHX3Q15911 3703 aa6.89□□□□□ -1.31
MCF2-209ENST00000520602 KIAA0087Q14695 138 aa6.88□□□□□ -1.31
MCF2-209ENST00000520602 ZNF73O43830 326 aaPredicted RBP6.88□□□□□ -1.31
MCF2-209ENST00000520602 EGFEM1PQ0D2K5 195 aa6.88□□□□□ -1.31
MCF2-209ENST00000520602 TENM1Q9UKZ4 2725 aa6.88□□□□□ -1.31
MCF2-209ENST00000520602 VWFP04275 2813 aa6.88□□□□□ -1.31
MCF2-209ENST00000520602 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.87□□□□□ -1.31
MCF2-209ENST00000520602 RPL37AP8A6NKH3 93 aa6.87□□□□□ -1.31
MCF2-209ENST00000520602 M0R378 163 aa6.86□□□□□ -1.31
MCF2-209ENST00000520602 FAM19A5Q7Z5A7 132 aaPredicted RBP6.86□□□□□ -1.31
MCF2-209ENST00000520602 C9orf153Q5TBE3 101 aa6.86□□□□□ -1.31
MCF2-209ENST00000520602 FAM240AA0A1B0GVK7 77 aa6.86□□□□□ -1.31
MCF2-209ENST00000520602 KMT2BQ9UMN6 2715 aaPredicted RBP6.85□□□□□ -1.31
MCF2-209ENST00000520602 USP17L23D6RBM5 183 aa6.85□□□□□ -1.31
MCF2-209ENST00000520602 NDUFC2-KCTD14E9PQ53 114 aa6.85□□□□□ -1.31
MCF2-209ENST00000520602 MUC7Q8TAX7 377 aa6.84□□□□□ -1.31
MCF2-209ENST00000520602 LINC01556Q5JQF7 62 aa6.84□□□□□ -1.31
MCF2-209ENST00000520602 H3BNG1 76 aa6.84□□□□□ -1.31
MCF2-209ENST00000520602 PRR34Q9NV39 138 aa6.84□□□□□ -1.31
MCF2-209ENST00000520602 F8WEM9 126 aa6.83□□□□□ -1.32
MCF2-209ENST00000520602 A0A1B0GX51 115 aa6.83□□□□□ -1.32
MCF2-209ENST00000520602 LINC00575Q6W349 94 aa6.83□□□□□ -1.32
MCF2-209ENST00000520602 SS18L2Q9UHA2 77 aa6.82□□□□□ -1.32
MCF2-209ENST00000520602 C2orf48Q96LS8 159 aa6.81□□□□□ -1.32
MCF2-209ENST00000520602 LINC00846Q9NV44 126 aa6.81□□□□□ -1.32
MCF2-209ENST00000520602 SCXQ7RTU7 201 aa6.81□□□□□ -1.32
MCF2-209ENST00000520602 LINC00588Q9Y4M8 146 aa6.81□□□□□ -1.32
MCF2-209ENST00000520602 M0R2N4 97 aa6.81□□□□□ -1.32
MCF2-209ENST00000520602 K7EIL1 84 aa6.8□□□□□ -1.32
MCF2-209ENST00000520602 CCKP06307 115 aa6.8□□□□□ -1.32
MCF2-209ENST00000520602 HIGD2AQ9BW72 106 aa6.8□□□□□ -1.32
MCF2-209ENST00000520602 A0A087WVE0 104 aa6.79□□□□□ -1.32
MCF2-209ENST00000520602 CCDC179H3BU77 68 aa6.79□□□□□ -1.32
MCF2-209ENST00000520602 WIPF1O43516 503 aa6.79□□□□□ -1.32
MCF2-209ENST00000520602 H3BQ85 93 aa6.78□□□□□ -1.32
MCF2-209ENST00000520602 NREPQ16612 68 aa6.78□□□□□ -1.32
MCF2-209ENST00000520602 C9orf129Q5T035 196 aaKnown RBP6.78□□□□□ -1.32
MCF2-209ENST00000520602 PPDPFQ9H3Y8 114 aa6.78□□□□□ -1.32
MCF2-209ENST00000520602 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.78□□□□□ -1.32
MCF2-209ENST00000520602 ATOX1O00244 68 aa6.77□□□□□ -1.33
MCF2-209ENST00000520602 Q6Q795 121 aa6.77□□□□□ -1.33
MCF2-209ENST00000520602 PDE6GP18545 87 aa6.77□□□□□ -1.33
MCF2-209ENST00000520602 FUSP35637 526 aaKnown RBP eCLIP6.77□□□□□ -1.33
MCF2-209ENST00000520602 Q6ZRP5 223 aa6.77□□□□□ -1.33
MCF2-209ENST00000520602 IMUPQ9GZP8 106 aa6.77□□□□□ -1.33
MCF2-209ENST00000520602 UPK3BQ9BT76 320 aa6.77□□□□□ -1.33
MCF2-209ENST00000520602 LOC107984640A0A0U1RRK4 108 aa6.76□□□□□ -1.33
MCF2-209ENST00000520602 C3orf84H3BNL1 204 aa6.76□□□□□ -1.33
MCF2-209ENST00000520602 FAM19A1Q7Z5A9 133 aa6.76□□□□□ -1.33
MCF2-209ENST00000520602 C15orf56Q8N910 161 aa6.76□□□□□ -1.33
MCF2-209ENST00000520602 GVQW2A0A096LPI5 108 aaPredicted RBP6.75□□□□□ -1.33
MCF2-209ENST00000520602 SMCR5Q8TEV8 140 aa6.75□□□□□ -1.33
MCF2-209ENST00000520602 C7orf33Q8WU49 177 aa6.75□□□□□ -1.33
MCF2-209ENST00000520602 DNAH10OSP0CZ25 163 aa6.74□□□□□ -1.33
MCF2-209ENST00000520602 IGLV6-57P01721 117 aa6.74□□□□□ -1.33
MCF2-209ENST00000520602 VPREB1P12018 145 aa6.74□□□□□ -1.33
MCF2-209ENST00000520602 A0A096LNI7 61 aa6.74□□□□□ -1.33
MCF2-209ENST00000520602 ZNF469Q96JG9 3925 aaPredicted RBP6.74□□□□□ -1.33
MCF2-209ENST00000520602 Q6JHZ5 121 aa6.73□□□□□ -1.33
MCF2-209ENST00000520602 Q8NDZ9 215 aa6.73□□□□□ -1.33
MCF2-209ENST00000520602 UBE2AP49459 152 aa6.73□□□□□ -1.33
MCF2-209ENST00000520602 C14orf177Q52M58 125 aa6.72□□□□□ -1.33
MCF2-209ENST00000520602 CASC10Q5T4H9 136 aa6.72□□□□□ -1.33
MCF2-209ENST00000520602 TRBV7-7A0A0K0K1E9 115 aa6.72□□□□□ -1.33
MCF2-209ENST00000520602 C22orf24Q9Y442 160 aa6.72□□□□□ -1.33
MCF2-209ENST00000520602 FAM168BA1KXE4 195 aa6.71□□□□□ -1.33
MCF2-209ENST00000520602 DHRS4-AS1Q9P1J3 65 aa6.71□□□□□ -1.34
MCF2-209ENST00000520602 FBN1P35555 2871 aaKnown RBP6.71□□□□□ -1.34
MCF2-209ENST00000520602 MRPL55Q7Z7F7 128 aaKnown RBP6.71□□□□□ -1.34
MCF2-209ENST00000520602 SERTAD4-AS1Q5TG53 156 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms