RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 SMIM13P0DJ93 91 aa8.59□□□□□ -1.03
VEGFA-221ENST00000520265 RPL28P46779 137 aaKnown RBP8.59□□□□□ -1.03
VEGFA-221ENST00000520265 PRR26Q8N8Z3 221 aa8.59□□□□□ -1.03
VEGFA-221ENST00000520265 NDUFA12Q9UI09 145 aa8.59□□□□□ -1.03
VEGFA-221ENST00000520265 IGLV5-37A0A075B6J1 123 aa8.58□□□□□ -1.04
VEGFA-221ENST00000520265 MYMXA0A1B0GTQ4 84 aa8.58□□□□□ -1.04
VEGFA-221ENST00000520265 IGKCP01834 107 aa8.58□□□□□ -1.04
VEGFA-221ENST00000520265 HIST1H2BKO60814 126 aa8.57□□□□□ -1.04
VEGFA-221ENST00000520265 HIST1H2BJP06899 126 aa8.57□□□□□ -1.04
VEGFA-221ENST00000520265 VPREB1P12018 145 aa8.57□□□□□ -1.04
VEGFA-221ENST00000520265 LGALS3P17931 250 aaKnown RBP8.57□□□□□ -1.04
VEGFA-221ENST00000520265 HIST1H2BOP23527 126 aa8.57□□□□□ -1.04
VEGFA-221ENST00000520265 HIST1H2BBP33778 126 aa8.57□□□□□ -1.04
VEGFA-221ENST00000520265 HIST1H2BDP58876 126 aa8.57□□□□□ -1.04
VEGFA-221ENST00000520265 HIST1H2BCP62807 126 aa8.57□□□□□ -1.04
VEGFA-221ENST00000520265 HERV-K104P63124 156 aa8.57□□□□□ -1.04
VEGFA-221ENST00000520265 HIST2H2BEQ16778 126 aa8.57□□□□□ -1.04
VEGFA-221ENST00000520265 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.57□□□□□ -1.04
VEGFA-221ENST00000520265 HIST1H2BHQ93079 126 aa8.57□□□□□ -1.04
VEGFA-221ENST00000520265 PLEKHB2Q96CS7 222 aa8.57□□□□□ -1.04
VEGFA-221ENST00000520265 HIST1H2BNQ99877 126 aa8.57□□□□□ -1.04
VEGFA-221ENST00000520265 HIST1H2BMQ99879 126 aa8.57□□□□□ -1.04
VEGFA-221ENST00000520265 LEPROTO15243 131 aa8.56□□□□□ -1.04
VEGFA-221ENST00000520265 KRTAP10-8P60410 259 aa8.56□□□□□ -1.04
VEGFA-221ENST00000520265 LINC00587B1AMM8 73 aa8.55□□□□□ -1.04
VEGFA-221ENST00000520265 NCR3O14931 201 aa8.55□□□□□ -1.04
VEGFA-221ENST00000520265 FAM19A1Q7Z5A9 133 aa8.55□□□□□ -1.04
VEGFA-221ENST00000520265 BOD1L2Q8IYS8 172 aa8.55□□□□□ -1.04
VEGFA-221ENST00000520265 MIR7-3HGQ8N6C7 128 aa8.55□□□□□ -1.04
VEGFA-221ENST00000520265 J3QQQ9 107 aa8.54□□□□□ -1.04
VEGFA-221ENST00000520265 TSPEAR-AS2P59090 65 aa8.54□□□□□ -1.04
VEGFA-221ENST00000520265 TMEM238C9JI98 176 aa8.53□□□□□ -1.04
VEGFA-221ENST00000520265 PRLHP81277 87 aa8.53□□□□□ -1.04
VEGFA-221ENST00000520265 IGLV1-50A0A075B6I6 118 aa8.52□□□□□ -1.05
VEGFA-221ENST00000520265 DAND5Q8N907 189 aa8.52□□□□□ -1.05
VEGFA-221ENST00000520265 Q8NDZ9 215 aa8.52□□□□□ -1.05
VEGFA-221ENST00000520265 SYS1-DBNDD2H3BUS1 97 aa8.51□□□□□ -1.05
VEGFA-221ENST00000520265 RPL13AP40429 203 aaKnown RBP8.51□□□□□ -1.05
VEGFA-221ENST00000520265 MIEN1Q9BRT3 115 aa8.51□□□□□ -1.05
VEGFA-221ENST00000520265 TMEM126AQ9H061 195 aa8.51□□□□□ -1.05
VEGFA-221ENST00000520265 M0R378 163 aa8.5□□□□□ -1.05
VEGFA-221ENST00000520265 KRTAP1-4P0C5Y4 121 aa8.5□□□□□ -1.05
VEGFA-221ENST00000520265 TNXBP22105 4242 aa8.5□□□□□ -1.05
VEGFA-221ENST00000520265 NMUP48645 174 aa8.49□□□□□ -1.05
VEGFA-221ENST00000520265 KRTDAPP60985 99 aa8.49□□□□□ -1.05
VEGFA-221ENST00000520265 NPC2P61916 151 aa8.48□□□□□ -1.05
VEGFA-221ENST00000520265 S100A12P80511 92 aa8.47□□□□□ -1.05
VEGFA-221ENST00000520265 HIGD2AQ9BW72 106 aa8.47□□□□□ -1.05
VEGFA-221ENST00000520265 E9PLD3 99 aa8.46□□□□□ -1.06
VEGFA-221ENST00000520265 PET117Q6UWS5 81 aa8.46□□□□□ -1.06
VEGFA-221ENST00000520265 ANAPC11Q9NYG5 84 aa8.46□□□□□ -1.06
VEGFA-221ENST00000520265 C20orf202A1L168 122 aa8.45□□□□□ -1.06
VEGFA-221ENST00000520265 CRYGAP11844 174 aa8.45□□□□□ -1.06
VEGFA-221ENST00000520265 HMCN2Q8NDA2 5059 aa8.44□□□□□ -1.06
VEGFA-221ENST00000520265 ETDCA0A1B0GVM5 59 aa8.44□□□□□ -1.06
VEGFA-221ENST00000520265 PRYO14603 147 aa8.44□□□□□ -1.06
VEGFA-221ENST00000520265 C3orf79P0CE67 100 aa8.44□□□□□ -1.06
VEGFA-221ENST00000520265 LINC01545Q5VT33 79 aa8.44□□□□□ -1.06
VEGFA-221ENST00000520265 KRTAP13-1Q8IUC0 172 aa8.44□□□□□ -1.06
VEGFA-221ENST00000520265 TYMSOSQ8TAI1 123 aa8.44□□□□□ -1.06
VEGFA-221ENST00000520265 IGKV2D-26A0A0A0MRZ7 120 aa8.43□□□□□ -1.06
VEGFA-221ENST00000520265 A0A0J9YXY3 114 aa8.43□□□□□ -1.06
VEGFA-221ENST00000520265 S100A7L2Q5SY68 101 aa8.43□□□□□ -1.06
VEGFA-221ENST00000520265 A0A087X002 238 aa8.42□□□□□ -1.06
VEGFA-221ENST00000520265 TRBV10-3A0A0K0K1G6 114 aa8.42□□□□□ -1.06
VEGFA-221ENST00000520265 ZNF815PA8K554 130 aa8.42□□□□□ -1.06
VEGFA-221ENST00000520265 TSPAN13O95857 204 aa8.42□□□□□ -1.06
VEGFA-221ENST00000520265 S100A1P23297 94 aa8.42□□□□□ -1.06
VEGFA-221ENST00000520265 DDTP30046 118 aa8.41□□□□□ -1.06
VEGFA-221ENST00000520265 SPANXB1Q9NS25 103 aaPredicted RBP8.41□□□□□ -1.06
VEGFA-221ENST00000520265 COA6Q5JTJ3 125 aaKnown RBP8.4□□□□□ -1.06
VEGFA-221ENST00000520265 ATOH7Q8N100 152 aa8.4□□□□□ -1.06
VEGFA-221ENST00000520265 S100A2P29034 98 aa8.39□□□□□ -1.07
VEGFA-221ENST00000520265 PRR4Q16378 134 aa8.38□□□□□ -1.07
VEGFA-221ENST00000520265 ADAMTSL4-AS1Q5T5F5 129 aa8.38□□□□□ -1.07
VEGFA-221ENST00000520265 SCGB1D4Q6XE38 83 aa8.38□□□□□ -1.07
VEGFA-221ENST00000520265 TTTY13Q9BZ97 58 aa8.38□□□□□ -1.07
VEGFA-221ENST00000520265 KCNQ1DNQ9H478 68 aa8.38□□□□□ -1.07
VEGFA-221ENST00000520265 TRBV10-2A0A0K0K1G8 114 aa8.37□□□□□ -1.07
VEGFA-221ENST00000520265 LINC00337Q8N6G1 96 aa8.37□□□□□ -1.07
VEGFA-221ENST00000520265 ZNF706Q9Y5V0 76 aaPredicted RBP8.37□□□□□ -1.07
VEGFA-221ENST00000520265 S100A6P06703 90 aa8.36□□□□□ -1.07
VEGFA-221ENST00000520265 FAM229BQ4G0N7 80 aa8.36□□□□□ -1.07
VEGFA-221ENST00000520265 SOSTDC1Q6X4U4 206 aa8.36□□□□□ -1.07
VEGFA-221ENST00000520265 OR13C6PQ8NH95 151 aa8.36□□□□□ -1.07
VEGFA-221ENST00000520265 LOC107984156A0A0G2JMH3 177 aa8.35□□□□□ -1.07
VEGFA-221ENST00000520265 NDUFC2O95298 119 aa8.35□□□□□ -1.07
VEGFA-221ENST00000520265 ARL17AQ8IVW1 177 aa8.35□□□□□ -1.07
VEGFA-221ENST00000520265 PPDPFQ9H3Y8 114 aa8.35□□□□□ -1.07
VEGFA-221ENST00000520265 TRAV23DV6A0A075B6W5 121 aa8.34□□□□□ -1.07
VEGFA-221ENST00000520265 EIF4EBP3O60516 100 aaPredicted RBP8.34□□□□□ -1.07
VEGFA-221ENST00000520265 KRTAP13-2Q52LG2 175 aa8.34□□□□□ -1.07
VEGFA-221ENST00000520265 SMCR5Q8TEV8 140 aa8.34□□□□□ -1.07
VEGFA-221ENST00000520265 SPRR4Q96PI1 79 aa8.34□□□□□ -1.07
VEGFA-221ENST00000520265 TIMM17BO60830 172 aa8.33□□□□□ -1.08
VEGFA-221ENST00000520265 SPRR1AP35321 89 aa8.33□□□□□ -1.08
VEGFA-221ENST00000520265 ANKRD39Q53RE8 183 aa8.33□□□□□ -1.08
VEGFA-221ENST00000520265 LINC00304Q8N9R0 145 aa8.33□□□□□ -1.08
VEGFA-221ENST00000520265 LINC00308Q8TCZ7 52 aa8.33□□□□□ -1.08
VEGFA-221ENST00000520265 AKR1D1P51857 326 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms