RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 EPM2AB3EWF7 344 aa11.25□□□□□ -0.61
SDC2-205ENST00000520233 SCXQ7RTU7 201 aa11.25□□□□□ -0.61
SDC2-205ENST00000520233 CIRBP-AS1Q8TBR5 109 aa11.25□□□□□ -0.61
SDC2-205ENST00000520233 XGP55808 180 aa11.24□□□□□ -0.61
SDC2-205ENST00000520233 LINC00308Q8TCZ7 52 aa11.24□□□□□ -0.61
SDC2-205ENST00000520233 MIEN1Q9BRT3 115 aa11.24□□□□□ -0.61
SDC2-205ENST00000520233 SERTAD4-AS1Q5TG53 156 aa11.23□□□□□ -0.61
SDC2-205ENST00000520233 SOSTDC1Q6X4U4 206 aa11.23□□□□□ -0.61
SDC2-205ENST00000520233 C2orf91Q6ZV80 131 aa11.23□□□□□ -0.61
SDC2-205ENST00000520233 FAM19A5Q7Z5A7 132 aaPredicted RBP11.23□□□□□ -0.61
SDC2-205ENST00000520233 KRTAP7-1Q8IUC3 87 aa11.23□□□□□ -0.61
SDC2-205ENST00000520233 HIGD1BQ9P298 99 aa11.23□□□□□ -0.61
SDC2-205ENST00000520233 UQCR10Q9UDW1 63 aa11.23□□□□□ -0.61
SDC2-205ENST00000520233 CDK2AP2O75956 126 aa11.22□□□□□ -0.61
SDC2-205ENST00000520233 IFITM1P13164 125 aa11.22□□□□□ -0.61
SDC2-205ENST00000520233 NPC2P61916 151 aa11.22□□□□□ -0.61
SDC2-205ENST00000520233 RPL24P83731 157 aaKnown RBP11.22□□□□□ -0.61
SDC2-205ENST00000520233 SRSF9Q13242 221 aaKnown RBP eCLIP11.22□□□□□ -0.61
SDC2-205ENST00000520233 LINC00518Q8N0U6 118 aa11.22□□□□□ -0.61
SDC2-205ENST00000520233 IGLV5-37A0A075B6J1 123 aa11.21□□□□□ -0.61
SDC2-205ENST00000520233 EIF4EBP3O60516 100 aaPredicted RBP11.21□□□□□ -0.61
SDC2-205ENST00000520233 HAMPP81172 84 aa11.21□□□□□ -0.61
SDC2-205ENST00000520233 COPS9Q8WXC6 57 aa11.21□□□□□ -0.61
SDC2-205ENST00000520233 PPDPFQ9H3Y8 114 aa11.21□□□□□ -0.61
SDC2-205ENST00000520233 VPREB1P12018 145 aa11.2□□□□□ -0.62
SDC2-205ENST00000520233 Q8NDZ9 215 aa11.2□□□□□ -0.62
SDC2-205ENST00000520233 PRO1933Q9H354 126 aa11.2□□□□□ -0.62
SDC2-205ENST00000520233 EPPK1P58107 5090 aaKnown RBP11.2□□□□□ -0.62
SDC2-205ENST00000520233 PKHD1P08F94 4074 aa11.19□□□□□ -0.62
SDC2-205ENST00000520233 MUSTN1Q8IVN3 82 aa11.19□□□□□ -0.62
SDC2-205ENST00000520233 C22orf24Q9Y442 160 aa11.19□□□□□ -0.62
SDC2-205ENST00000520233 M0QXV9 152 aa11.18□□□□□ -0.62
SDC2-205ENST00000520233 NDUFC2O95298 119 aa11.18□□□□□ -0.62
SDC2-205ENST00000520233 NKAPP1Q8N9T2 125 aa11.18□□□□□ -0.62
SDC2-205ENST00000520233 HIST1H4GQ99525 98 aa11.18□□□□□ -0.62
SDC2-205ENST00000520233 DYNC1H1Q14204 4646 aaKnown RBP11.17□□□□□ -0.62
SDC2-205ENST00000520233 PHF5AQ7RTV0 110 aaKnown RBP11.16□□□□□ -0.62
SDC2-205ENST00000520233 LRP1BQ9NZR2 4599 aa11.15□□□□□ -0.62
SDC2-205ENST00000520233 TAL2Q16559 108 aa11.15□□□□□ -0.62
SDC2-205ENST00000520233 LBHQ53QV2 105 aaPredicted RBP11.15□□□□□ -0.62
SDC2-205ENST00000520233 MRPL55Q7Z7F7 128 aaKnown RBP11.15□□□□□ -0.62
SDC2-205ENST00000520233 TSTD3H0UI37 97 aa11.14□□□□□ -0.63
SDC2-205ENST00000520233 M0R378 163 aa11.14□□□□□ -0.63
SDC2-205ENST00000520233 HNRNPA3P51991 378 aaKnown RBP11.14□□□□□ -0.63
SDC2-205ENST00000520233 PRR3P79522 188 aaKnown RBP11.14□□□□□ -0.63
SDC2-205ENST00000520233 DNAH8Q96JB1 4490 aa11.13□□□□□ -0.63
SDC2-205ENST00000520233 TRBV10-2A0A0K0K1G8 114 aa11.13□□□□□ -0.63
SDC2-205ENST00000520233 C7orf33Q8WU49 177 aa11.13□□□□□ -0.63
SDC2-205ENST00000520233 NCR3O14931 201 aa11.12□□□□□ -0.63
SDC2-205ENST00000520233 LINC00167Q96N53 147 aa11.12□□□□□ -0.63
SDC2-205ENST00000520233 BIRC6Q9NR09 4857 aa11.11□□□□□ -0.63
SDC2-205ENST00000520233 GAGE10A6NGK3 116 aa11.1□□□□□ -0.63
SDC2-205ENST00000520233 HSD52Q0P140 79 aa11.1□□□□□ -0.63
SDC2-205ENST00000520233 IGKV2-28A0A075B6P5 120 aa11.09□□□□□ -0.63
SDC2-205ENST00000520233 A4D1N5 150 aa11.09□□□□□ -0.63
SDC2-205ENST00000520233 IGKV2D-28P01615 120 aa11.09□□□□□ -0.63
SDC2-205ENST00000520233 SMR3BP02814 79 aaPredicted RBP11.09□□□□□ -0.63
SDC2-205ENST00000520233 UBE2BP63146 152 aa11.09□□□□□ -0.63
SDC2-205ENST00000520233 CEND1Q8N111 149 aa11.09□□□□□ -0.63
SDC2-205ENST00000520233 IGLV1-50A0A075B6I6 118 aa11.07□□□□□ -0.64
SDC2-205ENST00000520233 RPL37AP8A6NKH3 93 aa11.07□□□□□ -0.64
SDC2-205ENST00000520233 KRTAP11-1Q8IUC1 163 aa11.07□□□□□ -0.64
SDC2-205ENST00000520233 LINC00528Q8N1L1 170 aa11.06□□□□□ -0.64
SDC2-205ENST00000520233 TRBV10-3A0A0K0K1G6 114 aa11.05□□□□□ -0.64
SDC2-205ENST00000520233 DDTP30046 118 aa11.05□□□□□ -0.64
SDC2-205ENST00000520233 S100A7L2Q5SY68 101 aa11.05□□□□□ -0.64
SDC2-205ENST00000520233 LINC00337Q8N6G1 96 aa11.05□□□□□ -0.64
SDC2-205ENST00000520233 IGLV6-57P01721 117 aa11.04□□□□□ -0.64
SDC2-205ENST00000520233 TRAV13-2A0A0B4J235 113 aa11.03□□□□□ -0.64
SDC2-205ENST00000520233 TMEM238LA0A1B0GVL6 79 aa11.03□□□□□ -0.64
SDC2-205ENST00000520233 A6NJY4 79 aa11.03□□□□□ -0.64
SDC2-205ENST00000520233 CTAG1AP78358 180 aa11.03□□□□□ -0.64
SDC2-205ENST00000520233 OR13C6PQ8NH95 151 aa11.03□□□□□ -0.64
SDC2-205ENST00000520233 TMEM126AQ9H061 195 aa11.03□□□□□ -0.64
SDC2-205ENST00000520233 FXYD2P54710 66 aa11.02□□□□□ -0.65
SDC2-205ENST00000520233 PSORS1C2Q9UIG4 136 aa11.02□□□□□ -0.65
SDC2-205ENST00000520233 APOBP04114 4563 aaKnown RBP11.02□□□□□ -0.65
SDC2-205ENST00000520233 FAM229AH3BQW9 127 aa11.01□□□□□ -0.65
SDC2-205ENST00000520233 KCNQ1DNQ9H478 68 aa11.01□□□□□ -0.65
SDC2-205ENST00000520233 A6NDN8 102 aa11□□□□□ -0.65
SDC2-205ENST00000520233 PRYO14603 147 aa11□□□□□ -0.65
SDC2-205ENST00000520233 CFC1BP0CG36 223 aa11□□□□□ -0.65
SDC2-205ENST00000520233 CFC1P0CG37 223 aa11□□□□□ -0.65
SDC2-205ENST00000520233 RPL37AP61513 92 aaKnown RBP11□□□□□ -0.65
SDC2-205ENST00000520233 Q8N1X5 172 aa11□□□□□ -0.65
SDC2-205ENST00000520233 CBY1Q9Y3M2 126 aa11□□□□□ -0.65
SDC2-205ENST00000520233 REG3GQ6UW15 175 aa10.99□□□□□ -0.65
SDC2-205ENST00000520233 A0A0B4J2C4 111 aa10.98□□□□□ -0.65
SDC2-205ENST00000520233 C1orf137Q5JT78 98 aa10.98□□□□□ -0.65
SDC2-205ENST00000520233 BVES-AS1Q5T3Y7 98 aa10.98□□□□□ -0.65
SDC2-205ENST00000520233 TRAV23DV6A0A075B6W5 121 aa10.97□□□□□ -0.65
SDC2-205ENST00000520233 M0R143 59 aa10.97□□□□□ -0.65
SDC2-205ENST00000520233 PLA2G1BP04054 148 aaKnown RBP10.97□□□□□ -0.65
SDC2-205ENST00000520233 RAB37Q96AX2 223 aa10.97□□□□□ -0.65
SDC2-205ENST00000520233 RYR1P21817 5038 aa10.97□□□□□ -0.65
SDC2-205ENST00000520233 BCE1O60756 84 aa10.96□□□□□ -0.65
SDC2-205ENST00000520233 SPRR1AP35321 89 aa10.96□□□□□ -0.65
SDC2-205ENST00000520233 HINT1P49773 126 aaPredicted RBP10.96□□□□□ -0.65
SDC2-205ENST00000520233 Q5VSD8 79 aa10.96□□□□□ -0.65
SDC2-205ENST00000520233 KRTAP17-1Q9BYP8 105 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms