RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 LELP1Q5T871 98 aa3.77□□□□□ -1.81
CTNNA1-219ENST00000520158 Q5VSD8 79 aa3.77□□□□□ -1.81
CTNNA1-219ENST00000520158 LINC00173Q6ZV60 143 aa3.77□□□□□ -1.81
CTNNA1-219ENST00000520158 Q8N814 137 aa3.77□□□□□ -1.81
CTNNA1-219ENST00000520158 Q8N8P6 123 aa3.77□□□□□ -1.81
CTNNA1-219ENST00000520158 TMEM75Q8N9X5 138 aa3.77□□□□□ -1.81
CTNNA1-219ENST00000520158 URB1-AS1Q96HZ7 61 aa3.77□□□□□ -1.81
CTNNA1-219ENST00000520158 SRRM2Q9UQ35 2752 aaKnown RBP3.77□□□□□ -1.81
CTNNA1-219ENST00000520158 TRBV20OR9-2A0A075B6H5 130 aa3.76□□□□□ -1.81
CTNNA1-219ENST00000520158 TMSB15BA0A087X1C1 80 aa3.76□□□□□ -1.81
CTNNA1-219ENST00000520158 LOC100131303A0A0U1RQF7 123 aa3.76□□□□□ -1.81
CTNNA1-219ENST00000520158 TMEM256-PLSCR3K7ERE1 68 aa3.76□□□□□ -1.81
CTNNA1-219ENST00000520158 M0R381 172 aa3.76□□□□□ -1.81
CTNNA1-219ENST00000520158 MGST1P10620 155 aaKnown RBP3.76□□□□□ -1.81
CTNNA1-219ENST00000520158 RNASE3P12724 160 aaKnown RBP3.76□□□□□ -1.81
CTNNA1-219ENST00000520158 FUSP35637 526 aaKnown RBP eCLIP3.76□□□□□ -1.81
CTNNA1-219ENST00000520158 RHOHQ15669 191 aa3.76□□□□□ -1.81
CTNNA1-219ENST00000520158 FAM104BQ5XKR9 115 aa3.76□□□□□ -1.81
CTNNA1-219ENST00000520158 SDIM1Q6ZPB5 146 aa3.76□□□□□ -1.81
CTNNA1-219ENST00000520158 Q6ZSA8 131 aa3.76□□□□□ -1.81
CTNNA1-219ENST00000520158 Q75L30 129 aa3.76□□□□□ -1.81
CTNNA1-219ENST00000520158 UBE2WQ96B02 151 aa3.76□□□□□ -1.81
CTNNA1-219ENST00000520158 TOMM6Q96B49 74 aa3.76□□□□□ -1.81
CTNNA1-219ENST00000520158 IFI27L1Q96BM0 104 aa3.76□□□□□ -1.81
CTNNA1-219ENST00000520158 C11orf21Q9P2W6 132 aa3.76□□□□□ -1.81
CTNNA1-219ENST00000520158 DNAH8Q96JB1 4490 aa3.76□□□□□ -1.81
CTNNA1-219ENST00000520158 DMBT1Q9UGM3 2413 aaPredicted RBP3.75□□□□□ -1.81
CTNNA1-219ENST00000520158 TRBV7-3A0A075B6L6 115 aa3.75□□□□□ -1.81
CTNNA1-219ENST00000520158 IGLV5-52A0A0A0MRZ9 124 aa3.75□□□□□ -1.81
CTNNA1-219ENST00000520158 TRAV8-3A0A0A6YYJ7 113 aa3.75□□□□□ -1.81
CTNNA1-219ENST00000520158 CTXND1A0A1B0GTU2 59 aa3.75□□□□□ -1.81
CTNNA1-219ENST00000520158 H3BVH4 76 aa3.75□□□□□ -1.81
CTNNA1-219ENST00000520158 CCKP06307 115 aa3.75□□□□□ -1.81
CTNNA1-219ENST00000520158 ARL14EPLP0DKL9 152 aa3.75□□□□□ -1.81
CTNNA1-219ENST00000520158 Q6ZVQ6 151 aa3.75□□□□□ -1.81
CTNNA1-219ENST00000520158 LINC00337Q8N6G1 96 aa3.75□□□□□ -1.81
CTNNA1-219ENST00000520158 TIMM17AQ99595 171 aa3.75□□□□□ -1.81
CTNNA1-219ENST00000520158 OSTCQ9NRP0 149 aa3.75□□□□□ -1.81
CTNNA1-219ENST00000520158 TMEM167BQ9NRX6 74 aa3.75□□□□□ -1.81
CTNNA1-219ENST00000520158 FAM30AQ9NZY2 134 aa3.75□□□□□ -1.81
CTNNA1-219ENST00000520158 V9GYV3 84 aa3.75□□□□□ -1.81
CTNNA1-219ENST00000520158 TRBV25-1A0A075B6N4 114 aa3.74□□□□□ -1.81
CTNNA1-219ENST00000520158 IGKV3D-20A0A0C4DH25 116 aa3.74□□□□□ -1.81
CTNNA1-219ENST00000520158 TRBV10-2A0A0K0K1G8 114 aa3.74□□□□□ -1.81
CTNNA1-219ENST00000520158 SMIM27A0A1W2PRY6 76 aa3.74□□□□□ -1.81
CTNNA1-219ENST00000520158 PSCAO43653 123 aa3.74□□□□□ -1.81
CTNNA1-219ENST00000520158 SMR3BP02814 79 aaPredicted RBP3.74□□□□□ -1.81
CTNNA1-219ENST00000520158 MP68P56378 58 aa3.74□□□□□ -1.81
CTNNA1-219ENST00000520158 RIGQ13278 110 aa3.74□□□□□ -1.81
CTNNA1-219ENST00000520158 KRTAP19-4Q3LI73 84 aa3.74□□□□□ -1.81
CTNNA1-219ENST00000520158 LINC00474Q9P2X8 69 aa3.74□□□□□ -1.81
CTNNA1-219ENST00000520158 A0A0B4J2C4 111 aa3.73□□□□□ -1.81
CTNNA1-219ENST00000520158 LOC107984156A0A0G2JMH3 177 aa3.73□□□□□ -1.81
CTNNA1-219ENST00000520158 TRBV6-1A0A0K0K1D8 114 aa3.73□□□□□ -1.81
CTNNA1-219ENST00000520158 KRTAP29-1A8MX34 341 aaPredicted RBP3.73□□□□□ -1.81
CTNNA1-219ENST00000520158 H0Y9J4 135 aa3.73□□□□□ -1.81
CTNNA1-219ENST00000520158 PEX7O00628 323 aa3.73□□□□□ -1.81
CTNNA1-219ENST00000520158 BCE1O60756 84 aa3.73□□□□□ -1.81
CTNNA1-219ENST00000520158 PLA2G1BP04054 148 aaKnown RBP3.73□□□□□ -1.81
CTNNA1-219ENST00000520158 UBE2D1P51668 147 aa3.73□□□□□ -1.81
CTNNA1-219ENST00000520158 LINC00313P59037 77 aa3.73□□□□□ -1.81
CTNNA1-219ENST00000520158 Q6ZSN1 163 aa3.73□□□□□ -1.81
CTNNA1-219ENST00000520158 ARL17AQ8IVW1 177 aa3.73□□□□□ -1.81
CTNNA1-219ENST00000520158 Q9HAA7 133 aa3.73□□□□□ -1.81
CTNNA1-219ENST00000520158 FLG2Q5D862 2391 aaPredicted RBP3.73□□□□□ -1.81
CTNNA1-219ENST00000520158 LINC01549A6NIU2 74 aa3.72□□□□□ -1.81
CTNNA1-219ENST00000520158 COX7A2LO14548 114 aa3.72□□□□□ -1.81
CTNNA1-219ENST00000520158 IGHV3-30P01768 117 aa3.72□□□□□ -1.81
CTNNA1-219ENST00000520158 IGHV3-33P01772 117 aa3.72□□□□□ -1.81
CTNNA1-219ENST00000520158 IGHV3-30-3P0DP02 117 aa3.72□□□□□ -1.81
CTNNA1-219ENST00000520158 IGHV3-30-5P0DP03 117 aa3.72□□□□□ -1.81
CTNNA1-219ENST00000520158 CKS2P33552 79 aa3.72□□□□□ -1.81
CTNNA1-219ENST00000520158 CRIP1P50238 77 aa3.72□□□□□ -1.81
CTNNA1-219ENST00000520158 UBE2BP63146 152 aa3.72□□□□□ -1.81
CTNNA1-219ENST00000520158 PRNTQ86SH4 94 aa3.72□□□□□ -1.81
CTNNA1-219ENST00000520158 HIST1H4GQ99525 98 aa3.72□□□□□ -1.81
CTNNA1-219ENST00000520158 OPRPNQ99935 248 aaPredicted RBP3.72□□□□□ -1.81
CTNNA1-219ENST00000520158 CHCHD7Q9BUK0 85 aa3.72□□□□□ -1.81
CTNNA1-219ENST00000520158 MYCBP2O75592 4640 aa3.72□□□□□ -1.81
CTNNA1-219ENST00000520158 IGHV3-73A0A0B4J1V6 119 aa3.71□□□□□ -1.82
CTNNA1-219ENST00000520158 IGHV3OR16-9A0A0B4J2B5 98 aa3.71□□□□□ -1.82
CTNNA1-219ENST00000520158 TRBV10-1A0A0K0K1A3 114 aa3.71□□□□□ -1.82
CTNNA1-219ENST00000520158 F5H697 171 aa3.71□□□□□ -1.82
CTNNA1-219ENST00000520158 H7BZZ5 65 aa3.71□□□□□ -1.82
CTNNA1-219ENST00000520158 NDUFC1O43677 76 aa3.71□□□□□ -1.82
CTNNA1-219ENST00000520158 LTAP01374 205 aa3.71□□□□□ -1.82
CTNNA1-219ENST00000520158 XCL1P47992 114 aa3.71□□□□□ -1.82
CTNNA1-219ENST00000520158 KRTAP10-4P60372 401 aaPredicted RBP3.71□□□□□ -1.82
CTNNA1-219ENST00000520158 SUMO2P61956 95 aaKnown RBP3.71□□□□□ -1.82
CTNNA1-219ENST00000520158 PRR3P79522 188 aaKnown RBP3.71□□□□□ -1.82
CTNNA1-219ENST00000520158 CXCL6P80162 114 aa3.71□□□□□ -1.82
CTNNA1-219ENST00000520158 RBM3P98179 157 aaKnown RBP3.71□□□□□ -1.82
CTNNA1-219ENST00000520158 ATXN8Q156A1 80 aa3.71□□□□□ -1.82
CTNNA1-219ENST00000520158 DEFB104AQ8WTQ1 72 aa3.71□□□□□ -1.82
CTNNA1-219ENST00000520158 C11orf52Q96A22 123 aa3.71□□□□□ -1.82
CTNNA1-219ENST00000520158 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.71□□□□□ -1.82
CTNNA1-219ENST00000520158 A0A087WZ39 114 aa3.7□□□□□ -1.82
CTNNA1-219ENST00000520158 TEX49A0A1B0GTD5 131 aa3.7□□□□□ -1.82
CTNNA1-219ENST00000520158 LOC389332A0A1B0GUA5 103 aa3.7□□□□□ -1.82
CTNNA1-219ENST00000520158 ARMS2P0C7Q2 107 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms