RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 NUDT15Q9NV35 164 aa3□□□□□ -1.93
CTNNA1-216ENST00000519489 PYGO1Q9Y3Y4 419 aa3□□□□□ -1.93
CTNNA1-216ENST00000519489 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
CTNNA1-216ENST00000519489 XKRY2A2RUG3 117 aa2.99□□□□□ -1.93
CTNNA1-216ENST00000519489 Q6ZN92 141 aa2.99□□□□□ -1.93
CTNNA1-216ENST00000519489 TMEM18Q96B42 140 aa2.99□□□□□ -1.93
CTNNA1-216ENST00000519489 A0A0A0MQY5 61 aa2.98□□□□□ -1.93
CTNNA1-216ENST00000519489 CTXND1A0A1B0GTU2 59 aa2.98□□□□□ -1.93
CTNNA1-216ENST00000519489 A8MWL6 223 aa2.98□□□□□ -1.93
CTNNA1-216ENST00000519489 VCYO14598 125 aa2.98□□□□□ -1.93
CTNNA1-216ENST00000519489 CNPY1Q3B7I2 92 aa2.98□□□□□ -1.93
CTNNA1-216ENST00000519489 TCEAL7Q9BRU2 100 aa2.98□□□□□ -1.93
CTNNA1-216ENST00000519489 TNFSF18Q9UNG2 199 aa2.98□□□□□ -1.93
CTNNA1-216ENST00000519489 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
CTNNA1-216ENST00000519489 PAGE4O60829 102 aa2.97□□□□□ -1.93
CTNNA1-216ENST00000519489 RAB5AP20339 215 aa2.97□□□□□ -1.93
CTNNA1-216ENST00000519489 RAB14P61106 215 aa2.97□□□□□ -1.93
CTNNA1-216ENST00000519489 SERF2P84101 59 aa2.97□□□□□ -1.93
CTNNA1-216ENST00000519489 Q5XG85 94 aa2.97□□□□□ -1.93
CTNNA1-216ENST00000519489 NOTCH2NLQ7Z3S9 236 aa2.97□□□□□ -1.93
CTNNA1-216ENST00000519489 ST20-AS1Q8NBB2 130 aa2.97□□□□□ -1.93
CTNNA1-216ENST00000519489 PPP1R1CQ8WVI7 109 aa2.97□□□□□ -1.93
CTNNA1-216ENST00000519489 PSMG3Q9BT73 122 aaPredicted RBP2.97□□□□□ -1.93
CTNNA1-216ENST00000519489 SND1-IT1Q9HBX3 110 aa2.97□□□□□ -1.93
CTNNA1-216ENST00000519489 SPANXA1Q9NS26 97 aa2.97□□□□□ -1.93
CTNNA1-216ENST00000519489 IGLV4-3A0A075B6K6 122 aa2.96□□□□□ -1.94
CTNNA1-216ENST00000519489 S100A5P33763 92 aa2.96□□□□□ -1.94
CTNNA1-216ENST00000519489 C10orf91Q5T1B1 145 aa2.96□□□□□ -1.94
CTNNA1-216ENST00000519489 TMUB2Q71RG4 321 aa2.96□□□□□ -1.94
CTNNA1-216ENST00000519489 CDKN2A-AS1Q9UH64 79 aa2.96□□□□□ -1.94
CTNNA1-216ENST00000519489 MAP1LC3B2A6NCE7 125 aa2.95□□□□□ -1.94
CTNNA1-216ENST00000519489 MPC2O95563 127 aa2.95□□□□□ -1.94
CTNNA1-216ENST00000519489 RAB4AP20338 218 aa2.95□□□□□ -1.94
CTNNA1-216ENST00000519489 TAGLN2P37802 199 aaKnown RBP2.95□□□□□ -1.94
CTNNA1-216ENST00000519489 RPL35P42766 123 aaKnown RBP2.95□□□□□ -1.94
CTNNA1-216ENST00000519489 MAP1LC3BQ9GZQ8 125 aa2.95□□□□□ -1.94
CTNNA1-216ENST00000519489 GIPP09681 153 aaPredicted RBP2.94□□□□□ -1.94
CTNNA1-216ENST00000519489 PET100P0DJ07 73 aa2.94□□□□□ -1.94
CTNNA1-216ENST00000519489 RBM12B-AS1Q9P1G2 102 aa2.94□□□□□ -1.94
CTNNA1-216ENST00000519489 TRBV20OR9-2A0A075B6H5 130 aa2.93□□□□□ -1.94
CTNNA1-216ENST00000519489 A8MUU9 505 aa2.93□□□□□ -1.94
CTNNA1-216ENST00000519489 LYRM1O43325 122 aa2.93□□□□□ -1.94
CTNNA1-216ENST00000519489 PFDN1O60925 122 aa2.93□□□□□ -1.94
CTNNA1-216ENST00000519489 PFN2P35080 140 aa2.93□□□□□ -1.94
CTNNA1-216ENST00000519489 H2BFSP57053 126 aa2.93□□□□□ -1.94
CTNNA1-216ENST00000519489 CENPWQ5EE01 88 aa2.93□□□□□ -1.94
CTNNA1-216ENST00000519489 AMN1Q8IY45 258 aa2.93□□□□□ -1.94
CTNNA1-216ENST00000519489 KCNQ1DNQ9H478 68 aa2.93□□□□□ -1.94
CTNNA1-216ENST00000519489 A0A1B0GV50 99 aa2.92□□□□□ -1.94
CTNNA1-216ENST00000519489 ETDCA0A1B0GVM5 59 aa2.92□□□□□ -1.94
CTNNA1-216ENST00000519489 SMIM1B2RUZ4 78 aa2.92□□□□□ -1.94
CTNNA1-216ENST00000519489 PPP1R2P9O14990 202 aa2.92□□□□□ -1.94
CTNNA1-216ENST00000519489 PLA2G10O15496 165 aa2.92□□□□□ -1.94
CTNNA1-216ENST00000519489 CXCL5P42830 114 aa2.92□□□□□ -1.94
CTNNA1-216ENST00000519489 RPL24P83731 157 aaKnown RBP2.92□□□□□ -1.94
CTNNA1-216ENST00000519489 AKR1C8PQ5T2L2 129 aa2.92□□□□□ -1.94
CTNNA1-216ENST00000519489 EIF5A2Q9GZV4 153 aaKnown RBP2.92□□□□□ -1.94
CTNNA1-216ENST00000519489 PAM16Q9Y3D7 125 aa2.92□□□□□ -1.94
CTNNA1-216ENST00000519489 IL7P13232 177 aa2.91□□□□□ -1.94
CTNNA1-216ENST00000519489 CD164Q04900 197 aa2.91□□□□□ -1.94
CTNNA1-216ENST00000519489 COX7B2Q8TF08 81 aa2.91□□□□□ -1.94
CTNNA1-216ENST00000519489 TCAPO15273 167 aa2.9□□□□□ -1.95
CTNNA1-216ENST00000519489 ATP6V1G2O95670 118 aa2.9□□□□□ -1.95
CTNNA1-216ENST00000519489 GNG4P50150 75 aa2.9□□□□□ -1.95
CTNNA1-216ENST00000519489 PCP2Q8IVA1 136 aa2.9□□□□□ -1.95
CTNNA1-216ENST00000519489 Q96NJ1 140 aa2.9□□□□□ -1.95
CTNNA1-216ENST00000519489 AMELXQ99217 191 aa2.9□□□□□ -1.95
CTNNA1-216ENST00000519489 SPRR2GQ9BYE4 73 aa2.9□□□□□ -1.95
CTNNA1-216ENST00000519489 TMEM191AQ9H0A3 160 aa2.9□□□□□ -1.95
CTNNA1-216ENST00000519489 IFI27P40305 119 aaPredicted RBP2.89□□□□□ -1.95
CTNNA1-216ENST00000519489 RPL7L1Q6DKI1 246 aaKnown RBP2.89□□□□□ -1.95
CTNNA1-216ENST00000519489 C2orf66Q6UXQ4 117 aa2.89□□□□□ -1.95
CTNNA1-216ENST00000519489 TEX43Q6ZNM6 134 aa2.89□□□□□ -1.95
CTNNA1-216ENST00000519489 TMEM141Q96I45 108 aa2.89□□□□□ -1.95
CTNNA1-216ENST00000519489 TRBV10-3A0A0K0K1G6 114 aa2.88□□□□□ -1.95
CTNNA1-216ENST00000519489 FAM240BA0A1B0GVZ2 78 aa2.88□□□□□ -1.95
CTNNA1-216ENST00000519489 SCGB1D1O95968 90 aa2.88□□□□□ -1.95
CTNNA1-216ENST00000519489 LCE3CQ5T5A8 94 aa2.88□□□□□ -1.95
CTNNA1-216ENST00000519489 IGFL1Q6UW32 110 aa2.88□□□□□ -1.95
CTNNA1-216ENST00000519489 ALKAL2Q6UX46 152 aa2.88□□□□□ -1.95
CTNNA1-216ENST00000519489 KCNRGQ8N5I3 272 aa2.88□□□□□ -1.95
CTNNA1-216ENST00000519489 ZNF625Q96I27 306 aaPredicted RBP2.88□□□□□ -1.95
CTNNA1-216ENST00000519489 C2orf88Q9BSF0 95 aa2.88□□□□□ -1.95
CTNNA1-216ENST00000519489 BIN3Q9NQY0 253 aa2.88□□□□□ -1.95
CTNNA1-216ENST00000519489 TRAV9-1A0A075B6T8 112 aa2.87□□□□□ -1.95
CTNNA1-216ENST00000519489 BORCS7-ASMTA0A0B4J1R7 106 aa2.87□□□□□ -1.95
CTNNA1-216ENST00000519489 PPP1R17O96001 155 aa2.87□□□□□ -1.95
CTNNA1-216ENST00000519489 SPRR1BP22528 89 aa2.87□□□□□ -1.95
CTNNA1-216ENST00000519489 Q6ZRX8 168 aa2.87□□□□□ -1.95
CTNNA1-216ENST00000519489 SFT2D1Q8WV19 159 aa2.87□□□□□ -1.95
CTNNA1-216ENST00000519489 C11orf52Q96A22 123 aa2.87□□□□□ -1.95
CTNNA1-216ENST00000519489 BORCS7Q96B45 105 aa2.87□□□□□ -1.95
CTNNA1-216ENST00000519489 K7EN84 100 aa2.86□□□□□ -1.95
CTNNA1-216ENST00000519489 NCR3O14931 201 aa2.86□□□□□ -1.95
CTNNA1-216ENST00000519489 SSNA1O43805 119 aa2.86□□□□□ -1.95
CTNNA1-216ENST00000519489 HERVK_113P63121 156 aa2.85□□□□□ -1.95
CTNNA1-216ENST00000519489 CCL20P78556 96 aa2.85□□□□□ -1.95
CTNNA1-216ENST00000519489 PDZD11Q5EBL8 140 aa2.85□□□□□ -1.95
CTNNA1-216ENST00000519489 SMIM12Q96EX1 92 aa2.85□□□□□ -1.95
CTNNA1-216ENST00000519489 SMIM2Q9BVW6 85 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms