RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 S100A12P80511 92 aa2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 C9orf116Q5BN46 136 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 SPRR2FQ96RM1 72 aa2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 SS18L2Q9UHA2 77 aa2.13□□□□□ -2.07
HMGB1P23-201ENST00000518743 IGKV2D-26A0A0A0MRZ7 120 aa2.12□□□□□ -2.07
HMGB1P23-201ENST00000518743 MAP1LC3B2A6NCE7 125 aa2.12□□□□□ -2.07
HMGB1P23-201ENST00000518743 A6NN06 94 aa2.12□□□□□ -2.07
HMGB1P23-201ENST00000518743 SNRPGP15A8MWD9 76 aa2.12□□□□□ -2.07
HMGB1P23-201ENST00000518743 PP632Q6XCG6 107 aa2.12□□□□□ -2.07
HMGB1P23-201ENST00000518743 LINC00269Q8N2A0 174 aa2.12□□□□□ -2.07
HMGB1P23-201ENST00000518743 ZCCHC13Q8WW36 166 aaKnown RBP2.12□□□□□ -2.07
HMGB1P23-201ENST00000518743 BORCS5Q969J3 196 aa2.12□□□□□ -2.07
HMGB1P23-201ENST00000518743 MAP1LC3BQ9GZQ8 125 aa2.12□□□□□ -2.07
HMGB1P23-201ENST00000518743 SPANXA1Q9NS26 97 aa2.12□□□□□ -2.07
HMGB1P23-201ENST00000518743 M0R2P5 195 aa2.11□□□□□ -2.07
HMGB1P23-201ENST00000518743 MGST1P10620 155 aaKnown RBP2.11□□□□□ -2.07
HMGB1P23-201ENST00000518743 GNG2P59768 71 aa2.11□□□□□ -2.07
HMGB1P23-201ENST00000518743 TMEM78Q5T7P6 136 aa2.11□□□□□ -2.07
HMGB1P23-201ENST00000518743 KRTAP5-10Q6L8G5 202 aa2.11□□□□□ -2.07
HMGB1P23-201ENST00000518743 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
HMGB1P23-201ENST00000518743 Q6ZQT0 140 aa2.11□□□□□ -2.07
HMGB1P23-201ENST00000518743 C7orf65Q6ZTY9 151 aa2.11□□□□□ -2.07
HMGB1P23-201ENST00000518743 AKAP14Q86UN6 197 aa2.11□□□□□ -2.07
HMGB1P23-201ENST00000518743 ACBD7Q8N6N7 88 aa2.11□□□□□ -2.07
HMGB1P23-201ENST00000518743 CARD19Q96LW7 228 aa2.11□□□□□ -2.07
HMGB1P23-201ENST00000518743 LPAR5Q9H1C0 372 aa2.11□□□□□ -2.07
HMGB1P23-201ENST00000518743 A0A0G2JND7 137 aa2.1□□□□□ -2.07
HMGB1P23-201ENST00000518743 GABARAPH6UMI1 98 aa2.1□□□□□ -2.07
HMGB1P23-201ENST00000518743 COX4I1P13073 169 aa2.1□□□□□ -2.07
HMGB1P23-201ENST00000518743 RPL7P18124 248 aaKnown RBP2.1□□□□□ -2.07
HMGB1P23-201ENST00000518743 CCDC58Q4VC31 144 aa2.1□□□□□ -2.07
HMGB1P23-201ENST00000518743 HSD17B12Q53GQ0 312 aa2.1□□□□□ -2.07
HMGB1P23-201ENST00000518743 KRTAP26-1Q6PEX3 210 aa2.1□□□□□ -2.07
HMGB1P23-201ENST00000518743 OR2T35Q8NGX2 323 aa2.1□□□□□ -2.07
HMGB1P23-201ENST00000518743 RNASE11Q8TAA1 199 aaKnown RBP2.1□□□□□ -2.07
HMGB1P23-201ENST00000518743 PYDC1Q8WXC3 89 aa2.1□□□□□ -2.07
HMGB1P23-201ENST00000518743 ODF3Q96PU9 254 aa2.1□□□□□ -2.07
HMGB1P23-201ENST00000518743 CCDC32Q9BV29 185 aa2.1□□□□□ -2.07
HMGB1P23-201ENST00000518743 LOC107984640A0A0U1RRK4 108 aa2.09□□□□□ -2.07
HMGB1P23-201ENST00000518743 A8MWV9 139 aa2.09□□□□□ -2.07
HMGB1P23-201ENST00000518743 TSTD3H0UI37 97 aa2.09□□□□□ -2.07
HMGB1P23-201ENST00000518743 EDF1O60869 148 aaKnown RBP2.09□□□□□ -2.07
HMGB1P23-201ENST00000518743 ZNF818PQ6ZRF7 136 aa2.09□□□□□ -2.07
HMGB1P23-201ENST00000518743 EFCAB10A6NFE3 127 aa2.08□□□□□ -2.08
HMGB1P23-201ENST00000518743 TMBIM6P55061 237 aa2.08□□□□□ -2.08
HMGB1P23-201ENST00000518743 PKIAP61925 76 aa2.08□□□□□ -2.08
HMGB1P23-201ENST00000518743 MSMO1Q15800 293 aa2.08□□□□□ -2.08
HMGB1P23-201ENST00000518743 CFAP126Q5VTH2 177 aa2.08□□□□□ -2.08
HMGB1P23-201ENST00000518743 EXOC3-AS1Q8N2X6 119 aa2.08□□□□□ -2.08
HMGB1P23-201ENST00000518743 TMEM126AQ9H061 195 aa2.08□□□□□ -2.08
HMGB1P23-201ENST00000518743 C14orf132Q9NPU4 83 aa2.08□□□□□ -2.08
HMGB1P23-201ENST00000518743 OR5AC2Q9NZP5 309 aa2.08□□□□□ -2.08
HMGB1P23-201ENST00000518743 LAMTOR2Q9Y2Q5 125 aa2.08□□□□□ -2.08
HMGB1P23-201ENST00000518743 A0A087WXM4 84 aa2.07□□□□□ -2.08
HMGB1P23-201ENST00000518743 FAM24AA6NFZ4 105 aa2.07□□□□□ -2.08
HMGB1P23-201ENST00000518743 CCDC160A6NGH7 325 aa2.07□□□□□ -2.08
HMGB1P23-201ENST00000518743 M0R378 163 aa2.07□□□□□ -2.08
HMGB1P23-201ENST00000518743 PPYP01298 95 aa2.07□□□□□ -2.08
HMGB1P23-201ENST00000518743 TRGC2P03986 189 aa2.07□□□□□ -2.08
HMGB1P23-201ENST00000518743 LINC00694P0DN24 101 aa2.07□□□□□ -2.08
HMGB1P23-201ENST00000518743 BCL2P10415 239 aa2.07□□□□□ -2.08
HMGB1P23-201ENST00000518743 S100GP29377 79 aa2.07□□□□□ -2.08
HMGB1P23-201ENST00000518743 Q1T7F1 81 aa2.07□□□□□ -2.08
HMGB1P23-201ENST00000518743 C12orf73Q69YU5 71 aa2.07□□□□□ -2.08
HMGB1P23-201ENST00000518743 XAF1Q6GPH4 301 aa2.07□□□□□ -2.08
HMGB1P23-201ENST00000518743 SPAG11AQ6PDA7 123 aa2.07□□□□□ -2.08
HMGB1P23-201ENST00000518743 IZUMO2Q6UXV1 221 aa2.07□□□□□ -2.08
HMGB1P23-201ENST00000518743 S100ZQ8WXG8 99 aa2.07□□□□□ -2.08
HMGB1P23-201ENST00000518743 LINC00526Q96FQ7 95 aa2.07□□□□□ -2.08
HMGB1P23-201ENST00000518743 SLC25A21Q9BQT8 299 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P23-201ENST00000518743 Q9H521 79 aa2.07□□□□□ -2.08
HMGB1P23-201ENST00000518743 SPANXCQ9NY87 97 aa2.07□□□□□ -2.08
HMGB1P23-201ENST00000518743 HSPB11Q9Y547 144 aa2.07□□□□□ -2.08
HMGB1P23-201ENST00000518743 AP4S1Q9Y587 144 aa2.07□□□□□ -2.08
HMGB1P23-201ENST00000518743 IGKV3OR2-268A0A0C4DH90 116 aa2.06□□□□□ -2.08
HMGB1P23-201ENST00000518743 C9orf92A6NGG3 77 aa2.06□□□□□ -2.08
HMGB1P23-201ENST00000518743 COA5Q86WW8 74 aa2.06□□□□□ -2.08
HMGB1P23-201ENST00000518743 NPCDR1Q9BY65 106 aa2.06□□□□□ -2.08
HMGB1P23-201ENST00000518743 GVQW2A0A096LPI5 108 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P23-201ENST00000518743 TRBV6-8A0A0A6YYG3 113 aa2.05□□□□□ -2.08
HMGB1P23-201ENST00000518743 CEBPZOSA8MTT3 80 aa2.05□□□□□ -2.08
HMGB1P23-201ENST00000518743 FAM25AB3EWG3 89 aa2.05□□□□□ -2.08
HMGB1P23-201ENST00000518743 FAM25CB3EWG5 89 aa2.05□□□□□ -2.08
HMGB1P23-201ENST00000518743 FAM25GB3EWG6 89 aa2.05□□□□□ -2.08
HMGB1P23-201ENST00000518743 TMEM256-PLSCR3K7ERE1 68 aa2.05□□□□□ -2.08
HMGB1P23-201ENST00000518743 CFDP00746 253 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P23-201ENST00000518743 HIST1H1DP16402 221 aaKnown RBP2.05□□□□□ -2.08
HMGB1P23-201ENST00000518743 SURF2Q15527 256 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P23-201ENST00000518743 FAM19A2Q8N3H0 131 aa2.05□□□□□ -2.08
HMGB1P23-201ENST00000518743 NPVFQ9HCQ7 196 aa2.05□□□□□ -2.08
HMGB1P23-201ENST00000518743 MED9Q9NWA0 146 aa2.05□□□□□ -2.08
HMGB1P23-201ENST00000518743 HIGD1AQ9Y241 93 aa2.05□□□□□ -2.08
HMGB1P23-201ENST00000518743 A0A1W2PRE2 83 aa2.04□□□□□ -2.08
HMGB1P23-201ENST00000518743 TIMM17BO60830 172 aa2.04□□□□□ -2.08
HMGB1P23-201ENST00000518743 TMEM128Q5BJH2 165 aa2.04□□□□□ -2.08
HMGB1P23-201ENST00000518743 Q5BKY6 102 aa2.04□□□□□ -2.08
HMGB1P23-201ENST00000518743 KRTAP5-5Q701N2 237 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P23-201ENST00000518743 TRGV9Q99603 122 aa2.04□□□□□ -2.08
HMGB1P23-201ENST00000518743 C20orf202A1L168 122 aa2.03□□□□□ -2.08
HMGB1P23-201ENST00000518743 RBAKDNA6NC62 111 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms