RNA–Protein interactions for RNA: ENST00000518381.5

CTNNA1-208, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-208ENST00000518381 PMCHL2Q9BQD1 86 aa3.85□□□□□ -1.79
CTNNA1-208ENST00000518381 CHTOPQ9Y3Y2 248 aaKnown RBP3.85□□□□□ -1.79
CTNNA1-208ENST00000518381 C11orf86A6NJI1 115 aa3.84□□□□□ -1.79
CTNNA1-208ENST00000518381 IGLC3P0DOY3 106 aa3.84□□□□□ -1.79
CTNNA1-208ENST00000518381 ZNF22P17026 224 aaPredicted RBP3.84□□□□□ -1.79
CTNNA1-208ENST00000518381 SEC11AP67812 179 aa3.84□□□□□ -1.79
CTNNA1-208ENST00000518381 C6orf226Q5I0X4 101 aa3.84□□□□□ -1.79
CTNNA1-208ENST00000518381 CAMK2N2Q96S95 79 aa3.84□□□□□ -1.79
CTNNA1-208ENST00000518381 CDIP1Q9H305 208 aa3.84□□□□□ -1.79
CTNNA1-208ENST00000518381 MRPL35Q9NZE8 188 aaKnown RBP3.84□□□□□ -1.79
CTNNA1-208ENST00000518381 FSIP2Q5CZC0 6907 aa3.84□□□□□ -1.8
CTNNA1-208ENST00000518381 IGLV5-45A0A087WSX0 123 aa3.83□□□□□ -1.8
CTNNA1-208ENST00000518381 SMIM1B2RUZ4 78 aa3.83□□□□□ -1.8
CTNNA1-208ENST00000518381 LINC01547P58512 204 aaPredicted RBP3.83□□□□□ -1.8
CTNNA1-208ENST00000518381 RPL18AQ02543 176 aaKnown RBP3.83□□□□□ -1.8
CTNNA1-208ENST00000518381 COA6Q5JTJ3 125 aaKnown RBP3.83□□□□□ -1.8
CTNNA1-208ENST00000518381 TMEM170BQ5T4T1 132 aa3.83□□□□□ -1.8
CTNNA1-208ENST00000518381 LINC01561Q8N1V8 128 aa3.83□□□□□ -1.8
CTNNA1-208ENST00000518381 OR10D4PQ8NGN7 298 aa3.83□□□□□ -1.8
CTNNA1-208ENST00000518381 C2orf48Q96LS8 159 aa3.83□□□□□ -1.8
CTNNA1-208ENST00000518381 PACRGQ96M98 296 aaPredicted RBP3.83□□□□□ -1.8
CTNNA1-208ENST00000518381 HSPB8Q9UJY1 196 aa3.83□□□□□ -1.8
CTNNA1-208ENST00000518381 TRAV12-1A0A0B4J245 112 aa3.82□□□□□ -1.8
CTNNA1-208ENST00000518381 H3BRM9 83 aa3.82□□□□□ -1.8
CTNNA1-208ENST00000518381 NDUFA1O15239 70 aa3.82□□□□□ -1.8
CTNNA1-208ENST00000518381 PRSS2P07478 247 aa3.82□□□□□ -1.8
CTNNA1-208ENST00000518381 COX7B2Q8TF08 81 aa3.82□□□□□ -1.8
CTNNA1-208ENST00000518381 MAP1LC3CQ9BXW4 147 aa3.82□□□□□ -1.8
CTNNA1-208ENST00000518381 C6orf48Q9UBA6 75 aa3.82□□□□□ -1.8
CTNNA1-208ENST00000518381 F8VRH5 84 aa3.81□□□□□ -1.8
CTNNA1-208ENST00000518381 SYS1-DBNDD2H3BUS1 97 aa3.81□□□□□ -1.8
CTNNA1-208ENST00000518381 C3orf79P0CE67 100 aa3.81□□□□□ -1.8
CTNNA1-208ENST00000518381 CKS1BP61024 79 aa3.81□□□□□ -1.8
CTNNA1-208ENST00000518381 SNRPEP62304 92 aaKnown RBP3.81□□□□□ -1.8
CTNNA1-208ENST00000518381 TPRXLQ17RH7 258 aa3.81□□□□□ -1.8
CTNNA1-208ENST00000518381 GAGE2EQ4V326 116 aa3.81□□□□□ -1.8
CTNNA1-208ENST00000518381 Q8IZM0 81 aa3.81□□□□□ -1.8
CTNNA1-208ENST00000518381 GAGE2DQ9UEU5 116 aa3.81□□□□□ -1.8
CTNNA1-208ENST00000518381 IGLV5-39A0A0G2JS06 123 aa3.8□□□□□ -1.8
CTNNA1-208ENST00000518381 TMEM223A0PJW6 202 aa3.8□□□□□ -1.8
CTNNA1-208ENST00000518381 KRTDAPP60985 99 aa3.8□□□□□ -1.8
CTNNA1-208ENST00000518381 RNF151Q2KHN1 245 aa3.8□□□□□ -1.8
CTNNA1-208ENST00000518381 KRTAP11-1Q8IUC1 163 aa3.8□□□□□ -1.8
CTNNA1-208ENST00000518381 HIST3H2BBQ8N257 126 aa3.8□□□□□ -1.8
CTNNA1-208ENST00000518381 ZNF625Q96I27 306 aaPredicted RBP3.8□□□□□ -1.8
CTNNA1-208ENST00000518381 F8WDY8 70 aa3.79□□□□□ -1.8
CTNNA1-208ENST00000518381 DPM2O94777 84 aa3.79□□□□□ -1.8
CTNNA1-208ENST00000518381 IGKCP01834 107 aa3.79□□□□□ -1.8
CTNNA1-208ENST00000518381 S100A6P06703 90 aa3.79□□□□□ -1.8
CTNNA1-208ENST00000518381 CRYGAP11844 174 aa3.79□□□□□ -1.8
CTNNA1-208ENST00000518381 S100A2P29034 98 aa3.79□□□□□ -1.8
CTNNA1-208ENST00000518381 UBE2BP63146 152 aa3.79□□□□□ -1.8
CTNNA1-208ENST00000518381 PET117Q6UWS5 81 aa3.79□□□□□ -1.8
CTNNA1-208ENST00000518381 IGLV7-46A0A075B6I9 117 aa3.78□□□□□ -1.8
CTNNA1-208ENST00000518381 TRBV30A0A0K0K1B3 111 aa3.78□□□□□ -1.8
CTNNA1-208ENST00000518381 A0A0U1RRA0 63 aa3.78□□□□□ -1.8
CTNNA1-208ENST00000518381 FAM168BA1KXE4 195 aa3.78□□□□□ -1.8
CTNNA1-208ENST00000518381 ZNF861PO60384 105 aa3.78□□□□□ -1.8
CTNNA1-208ENST00000518381 PFN2P35080 140 aa3.78□□□□□ -1.8
CTNNA1-208ENST00000518381 TSPEAR-AS2P59090 65 aa3.78□□□□□ -1.8
CTNNA1-208ENST00000518381 LINC01545Q5VT33 79 aa3.78□□□□□ -1.8
CTNNA1-208ENST00000518381 FAM19A5Q7Z5A7 132 aaPredicted RBP3.78□□□□□ -1.8
CTNNA1-208ENST00000518381 ATOH7Q8N100 152 aa3.78□□□□□ -1.8
CTNNA1-208ENST00000518381 TYMSOSQ8TAI1 123 aa3.78□□□□□ -1.8
CTNNA1-208ENST00000518381 HIST1H2BLQ99880 126 aa3.78□□□□□ -1.8
CTNNA1-208ENST00000518381 XAGE1AQ9HD64 81 aa3.78□□□□□ -1.8
CTNNA1-208ENST00000518381 C5orf52A6NGY3 159 aa3.77□□□□□ -1.81
CTNNA1-208ENST00000518381 NDUFC2-KCTD14E9PQ53 114 aa3.77□□□□□ -1.81
CTNNA1-208ENST00000518381 M0QXV9 152 aa3.77□□□□□ -1.81
CTNNA1-208ENST00000518381 LEPROTO15243 131 aa3.77□□□□□ -1.81
CTNNA1-208ENST00000518381 TLX1NBP0CAT3 122 aa3.77□□□□□ -1.81
CTNNA1-208ENST00000518381 PLNP26678 52 aa3.77□□□□□ -1.81
CTNNA1-208ENST00000518381 C9orf129Q5T035 196 aaKnown RBP3.77□□□□□ -1.81
CTNNA1-208ENST00000518381 KRTAP7-1Q8IUC3 87 aa3.77□□□□□ -1.81
CTNNA1-208ENST00000518381 RETNLBQ9BQ08 111 aa3.77□□□□□ -1.81
CTNNA1-208ENST00000518381 TMA7Q9Y2S6 64 aaKnown RBP3.77□□□□□ -1.81
CTNNA1-208ENST00000518381 A0A087X002 238 aa3.76□□□□□ -1.81
CTNNA1-208ENST00000518381 J3QQQ9 107 aa3.76□□□□□ -1.81
CTNNA1-208ENST00000518381 CXCL5P42830 114 aa3.76□□□□□ -1.81
CTNNA1-208ENST00000518381 LINC00158P58513 81 aa3.76□□□□□ -1.81
CTNNA1-208ENST00000518381 NDUFA12Q9UI09 145 aa3.76□□□□□ -1.81
CTNNA1-208ENST00000518381 IGKV2D-26A0A0A0MRZ7 120 aa3.75□□□□□ -1.81
CTNNA1-208ENST00000518381 SMIM13P0DJ93 91 aa3.75□□□□□ -1.81
CTNNA1-208ENST00000518381 HERVK_113P61574 105 aa3.75□□□□□ -1.81
CTNNA1-208ENST00000518381 CTAG1AP78358 180 aa3.75□□□□□ -1.81
CTNNA1-208ENST00000518381 PLEKHB2Q96CS7 222 aa3.75□□□□□ -1.81
CTNNA1-208ENST00000518381 TTTY13Q9BZ97 58 aa3.75□□□□□ -1.81
CTNNA1-208ENST00000518381 ERG28Q9UKR5 140 aa3.75□□□□□ -1.81
CTNNA1-208ENST00000518381 MYMXA0A1B0GTQ4 84 aa3.74□□□□□ -1.81
CTNNA1-208ENST00000518381 E9PLD3 99 aa3.74□□□□□ -1.81
CTNNA1-208ENST00000518381 SCGB1D1O95968 90 aa3.74□□□□□ -1.81
CTNNA1-208ENST00000518381 LGALS3P17931 250 aaKnown RBP3.74□□□□□ -1.81
CTNNA1-208ENST00000518381 KRTAP15-1Q3LI76 137 aa3.74□□□□□ -1.81
CTNNA1-208ENST00000518381 ASB16-AS1Q495Z4 193 aa3.74□□□□□ -1.81
CTNNA1-208ENST00000518381 DAND5Q8N907 189 aa3.74□□□□□ -1.81
CTNNA1-208ENST00000518381 LINC00304Q8N9R0 145 aa3.74□□□□□ -1.81
CTNNA1-208ENST00000518381 PPDPFQ9H3Y8 114 aa3.74□□□□□ -1.81
CTNNA1-208ENST00000518381 SND1-IT1Q9HBX3 110 aa3.74□□□□□ -1.81
CTNNA1-208ENST00000518381 C20orf202A1L168 122 aa3.73□□□□□ -1.81
CTNNA1-208ENST00000518381 RPL28P46779 137 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms