RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 SMCR5Q8TEV8 140 aa2.93□□□□□ -1.94
LINC00535-202ENST00000517785 C2orf88Q9BSF0 95 aa2.93□□□□□ -1.94
LINC00535-202ENST00000517785 EIF5A2Q9GZV4 153 aaKnown RBP2.93□□□□□ -1.94
LINC00535-202ENST00000517785 LINC00846Q9NV44 126 aa2.93□□□□□ -1.94
LINC00535-202ENST00000517785 CDKN2A-AS1Q9UH64 79 aa2.93□□□□□ -1.94
LINC00535-202ENST00000517785 UMAD1C9J7I0 102 aa2.92□□□□□ -1.94
LINC00535-202ENST00000517785 PDE6DO43924 150 aa2.92□□□□□ -1.94
LINC00535-202ENST00000517785 PFN2P35080 140 aa2.92□□□□□ -1.94
LINC00535-202ENST00000517785 RAB14P61106 215 aa2.92□□□□□ -1.94
LINC00535-202ENST00000517785 RPL37P61927 97 aaKnown RBP2.92□□□□□ -1.94
LINC00535-202ENST00000517785 KRTAP19-6Q3LI70 58 aa2.92□□□□□ -1.94
LINC00535-202ENST00000517785 C9orf153Q5TBE3 101 aa2.92□□□□□ -1.94
LINC00535-202ENST00000517785 HRCT1Q6UXD1 115 aa2.92□□□□□ -1.94
LINC00535-202ENST00000517785 URB1-AS1Q96HZ7 61 aa2.92□□□□□ -1.94
LINC00535-202ENST00000517785 C20orf78Q9BR46 151 aa2.92□□□□□ -1.94
LINC00535-202ENST00000517785 D6R8Y8 96 aa2.91□□□□□ -1.94
LINC00535-202ENST00000517785 SMLR1H3BR10 107 aa2.91□□□□□ -1.94
LINC00535-202ENST00000517785 NPYP01303 97 aa2.91□□□□□ -1.94
LINC00535-202ENST00000517785 CKS2P33552 79 aa2.91□□□□□ -1.94
LINC00535-202ENST00000517785 CXCL5P42830 114 aa2.91□□□□□ -1.94
LINC00535-202ENST00000517785 KRTAP10-10P60014 251 aa2.91□□□□□ -1.94
LINC00535-202ENST00000517785 LINC00483Q53H64 154 aa2.91□□□□□ -1.94
LINC00535-202ENST00000517785 SSBP3-AS1Q7Z2R9 100 aa2.91□□□□□ -1.94
LINC00535-202ENST00000517785 FAM19A3Q7Z5A8 133 aa2.91□□□□□ -1.94
LINC00535-202ENST00000517785 LINC01551Q86U37 167 aa2.91□□□□□ -1.94
LINC00535-202ENST00000517785 COX7B2Q8TF08 81 aa2.91□□□□□ -1.94
LINC00535-202ENST00000517785 GEMIN7Q9H840 131 aaKnown RBP2.91□□□□□ -1.94
LINC00535-202ENST00000517785 LOC389332A0A1B0GUA5 103 aa2.9□□□□□ -1.95
LINC00535-202ENST00000517785 SMIM1B2RUZ4 78 aa2.9□□□□□ -1.95
LINC00535-202ENST00000517785 KRTAP10-12P60413 245 aa2.9□□□□□ -1.95
LINC00535-202ENST00000517785 RIGQ13278 110 aa2.9□□□□□ -1.95
LINC00535-202ENST00000517785 FAM104BQ5XKR9 115 aa2.9□□□□□ -1.95
LINC00535-202ENST00000517785 S100ZQ8WXG8 99 aa2.9□□□□□ -1.95
LINC00535-202ENST00000517785 VCX2Q9H322 139 aa2.9□□□□□ -1.95
LINC00535-202ENST00000517785 SND1-IT1Q9HBX3 110 aa2.9□□□□□ -1.95
LINC00535-202ENST00000517785 BATF3Q9NR55 127 aa2.9□□□□□ -1.95
LINC00535-202ENST00000517785 CHTOPQ9Y3Y2 248 aaKnown RBP2.9□□□□□ -1.95
LINC00535-202ENST00000517785 PYGO1Q9Y3Y4 419 aa2.9□□□□□ -1.95
LINC00535-202ENST00000517785 TRBV24-1A0A075B6N3 115 aa2.89□□□□□ -1.95
LINC00535-202ENST00000517785 ERC2-IT1O76042 136 aa2.89□□□□□ -1.95
LINC00535-202ENST00000517785 SPINK8P0C7L1 97 aa2.89□□□□□ -1.95
LINC00535-202ENST00000517785 RAB5AP20339 215 aa2.89□□□□□ -1.95
LINC00535-202ENST00000517785 CEBPGP53567 150 aa2.89□□□□□ -1.95
LINC00535-202ENST00000517785 HERVK_113P63121 156 aa2.89□□□□□ -1.95
LINC00535-202ENST00000517785 RPL24P83731 157 aaKnown RBP2.89□□□□□ -1.95
LINC00535-202ENST00000517785 AMELXQ99217 191 aa2.89□□□□□ -1.95
LINC00535-202ENST00000517785 ETDCA0A1B0GVM5 59 aa2.88□□□□□ -1.95
LINC00535-202ENST00000517785 KMT2DO14686 5537 aa2.88□□□□□ -1.95
LINC00535-202ENST00000517785 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
LINC00535-202ENST00000517785 C2orf66Q6UXQ4 117 aa2.88□□□□□ -1.95
LINC00535-202ENST00000517785 LINC00862A6NCI5 91 aa2.87□□□□□ -1.95
LINC00535-202ENST00000517785 ATP5LO75964 103 aa2.87□□□□□ -1.95
LINC00535-202ENST00000517785 LGALS3P17931 250 aaKnown RBP2.87□□□□□ -1.95
LINC00535-202ENST00000517785 KIAA1644Q3SXP7 199 aa2.87□□□□□ -1.95
LINC00535-202ENST00000517785 PDZD11Q5EBL8 140 aa2.87□□□□□ -1.95
LINC00535-202ENST00000517785 ZNF625Q96I27 306 aaPredicted RBP2.87□□□□□ -1.95
LINC00535-202ENST00000517785 CYSLTR1Q9Y271 337 aa2.87□□□□□ -1.95
LINC00535-202ENST00000517785 MDN1Q9NU22 5596 aa2.86□□□□□ -1.95
LINC00535-202ENST00000517785 KANTRA0A1W2PQU2 76 aa2.86□□□□□ -1.95
LINC00535-202ENST00000517785 TEX46H3BTG2 121 aa2.86□□□□□ -1.95
LINC00535-202ENST00000517785 H7C2G1 150 aa2.86□□□□□ -1.95
LINC00535-202ENST00000517785 NCR3O14931 201 aa2.86□□□□□ -1.95
LINC00535-202ENST00000517785 MRPL54Q6P161 138 aaKnown RBP2.86□□□□□ -1.95
LINC00535-202ENST00000517785 LIMD2Q9BT23 127 aa2.86□□□□□ -1.95
LINC00535-202ENST00000517785 ERG28Q9UKR5 140 aa2.86□□□□□ -1.95
LINC00535-202ENST00000517785 V9GYV3 84 aa2.86□□□□□ -1.95
LINC00535-202ENST00000517785 C20orf202A1L168 122 aa2.85□□□□□ -1.95
LINC00535-202ENST00000517785 SEC11AP67812 179 aa2.85□□□□□ -1.95
LINC00535-202ENST00000517785 NAT8BQ9UHF3 227 aa2.85□□□□□ -1.95
LINC00535-202ENST00000517785 A0A0U1RRA0 63 aa2.84□□□□□ -1.95
LINC00535-202ENST00000517785 IGIPA6NJ69 53 aa2.84□□□□□ -1.95
LINC00535-202ENST00000517785 SPRR1AP35321 89 aa2.84□□□□□ -1.95
LINC00535-202ENST00000517785 ZNF345Q14585 488 aa2.84□□□□□ -1.95
LINC00535-202ENST00000517785 PRELID3AQ96N28 172 aa2.84□□□□□ -1.95
LINC00535-202ENST00000517785 Q9BRP9 147 aa2.84□□□□□ -1.95
LINC00535-202ENST00000517785 OSTCQ9NRP0 149 aa2.84□□□□□ -1.95
LINC00535-202ENST00000517785 TRBV10-3A0A0K0K1G6 114 aa2.83□□□□□ -1.96
LINC00535-202ENST00000517785 FAM74A3Q4VXF1 159 aa2.83□□□□□ -1.96
LINC00535-202ENST00000517785 TMEM136Q6ZRR5 245 aa2.83□□□□□ -1.96
LINC00535-202ENST00000517785 ORMDL3Q8N138 153 aa2.83□□□□□ -1.96
LINC00535-202ENST00000517785 ST20-AS1Q8NBB2 130 aa2.83□□□□□ -1.96
LINC00535-202ENST00000517785 SMIM7Q9BQ49 75 aa2.83□□□□□ -1.96
LINC00535-202ENST00000517785 IGLV5-45A0A087WSX0 123 aa2.82□□□□□ -1.96
LINC00535-202ENST00000517785 TINCRA0A1B0GVN0 87 aa2.82□□□□□ -1.96
LINC00535-202ENST00000517785 LINC00299Q6ZSB3 139 aa2.82□□□□□ -1.96
LINC00535-202ENST00000517785 KCNQ1DNQ9H478 68 aa2.82□□□□□ -1.96
LINC00535-202ENST00000517785 MAP1LC3AQ9H492 121 aa2.82□□□□□ -1.96
LINC00535-202ENST00000517785 GPR98Q8WXG9 6306 aa2.81□□□□□ -1.96
LINC00535-202ENST00000517785 F8W036 122 aa2.81□□□□□ -1.96
LINC00535-202ENST00000517785 TMEM250H0YL14 139 aa2.81□□□□□ -1.96
LINC00535-202ENST00000517785 PPBPP02775 128 aa2.81□□□□□ -1.96
LINC00535-202ENST00000517785 ADCYAP1P18509 176 aa2.81□□□□□ -1.96
LINC00535-202ENST00000517785 TAGLN2P37802 199 aaKnown RBP2.81□□□□□ -1.96
LINC00535-202ENST00000517785 LINC00158P58513 81 aa2.81□□□□□ -1.96
LINC00535-202ENST00000517785 RPL23P62829 140 aaKnown RBP2.81□□□□□ -1.96
LINC00535-202ENST00000517785 ORMDL2Q53FV1 153 aa2.81□□□□□ -1.96
LINC00535-202ENST00000517785 C1orf195Q5TG92 126 aa2.81□□□□□ -1.96
LINC00535-202ENST00000517785 BOD1L2Q8IYS8 172 aa2.81□□□□□ -1.96
LINC00535-202ENST00000517785 Q8N8P6 123 aa2.81□□□□□ -1.96
LINC00535-202ENST00000517785 C20orf166-AS1Q96NR2 134 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms