RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 SYS1-DBNDD2H3BUS1 97 aa13□□□□□ -0.33
MTCL1-204ENST00000517554 SRSF9Q13242 221 aaKnown RBP eCLIP13□□□□□ -0.33
MTCL1-204ENST00000517554 MIEN1Q9BRT3 115 aa13□□□□□ -0.33
MTCL1-204ENST00000517554 C20orf202A1L168 122 aa12.99□□□□□ -0.33
MTCL1-204ENST00000517554 PET117Q6UWS5 81 aa12.99□□□□□ -0.33
MTCL1-204ENST00000517554 OXTP01178 125 aa12.98□□□□□ -0.33
MTCL1-204ENST00000517554 SPATA45Q537H7 98 aa12.98□□□□□ -0.33
MTCL1-204ENST00000517554 PMCHL2Q9BQD1 86 aa12.98□□□□□ -0.33
MTCL1-204ENST00000517554 J3QL48 77 aa12.98□□□□□ -0.33
MTCL1-204ENST00000517554 PFN2P35080 140 aa12.98□□□□□ -0.33
MTCL1-204ENST00000517554 MAP1LC3CQ9BXW4 147 aa12.98□□□□□ -0.33
MTCL1-204ENST00000517554 C22orf24Q9Y442 160 aa12.98□□□□□ -0.33
MTCL1-204ENST00000517554 LBHQ53QV2 105 aaPredicted RBP12.97□□□□□ -0.33
MTCL1-204ENST00000517554 ERG28Q9UKR5 140 aa12.97□□□□□ -0.33
MTCL1-204ENST00000517554 C1orf137Q5JT78 98 aa12.95□□□□□ -0.34
MTCL1-204ENST00000517554 LINC01545Q5VT33 79 aa12.94□□□□□ -0.34
MTCL1-204ENST00000517554 PLA2G2DQ9UNK4 145 aa12.94□□□□□ -0.34
MTCL1-204ENST00000517554 SPINK6Q6UWN8 80 aa12.93□□□□□ -0.34
MTCL1-204ENST00000517554 DPM2O94777 84 aa12.92□□□□□ -0.34
MTCL1-204ENST00000517554 MT1HL1P0DM35 61 aa12.92□□□□□ -0.34
MTCL1-204ENST00000517554 PLNP26678 52 aa12.92□□□□□ -0.34
MTCL1-204ENST00000517554 TSPEAR-AS2P59090 65 aa12.92□□□□□ -0.34
MTCL1-204ENST00000517554 UBE2BP63146 152 aa12.92□□□□□ -0.34
MTCL1-204ENST00000517554 COX17Q14061 63 aa12.92□□□□□ -0.34
MTCL1-204ENST00000517554 ATOH7Q8N100 152 aa12.92□□□□□ -0.34
MTCL1-204ENST00000517554 SND1-IT1Q9HBX3 110 aa12.92□□□□□ -0.34
MTCL1-204ENST00000517554 UQCR10Q9UDW1 63 aa12.92□□□□□ -0.34
MTCL1-204ENST00000517554 SFTA2Q6UW10 78 aa12.91□□□□□ -0.34
MTCL1-204ENST00000517554 TP73-AS1Q9UF72 201 aa12.9□□□□□ -0.34
MTCL1-204ENST00000517554 IGKCP01834 107 aa12.9□□□□□ -0.35
MTCL1-204ENST00000517554 IGLV7-43P04211 117 aa12.9□□□□□ -0.35
MTCL1-204ENST00000517554 MRPL55Q7Z7F7 128 aaKnown RBP12.9□□□□□ -0.35
MTCL1-204ENST00000517554 Q8NDZ9 215 aa12.9□□□□□ -0.35
MTCL1-204ENST00000517554 IGLV5-37A0A075B6J1 123 aa12.89□□□□□ -0.35
MTCL1-204ENST00000517554 M0R143 59 aa12.89□□□□□ -0.35
MTCL1-204ENST00000517554 SNHG12Q9BXW3 62 aa12.89□□□□□ -0.35
MTCL1-204ENST00000517554 LINC00167Q96N53 147 aa12.88□□□□□ -0.35
MTCL1-204ENST00000517554 A0A0U1RRA0 63 aa12.87□□□□□ -0.35
MTCL1-204ENST00000517554 NDUFA12Q9UI09 145 aa12.87□□□□□ -0.35
MTCL1-204ENST00000517554 TNXBP22105 4242 aa12.87□□□□□ -0.35
MTCL1-204ENST00000517554 LEPROTO15243 131 aa12.86□□□□□ -0.35
MTCL1-204ENST00000517554 SMIM13P0DJ93 91 aa12.86□□□□□ -0.35
MTCL1-204ENST00000517554 VPREB1P12018 145 aa12.86□□□□□ -0.35
MTCL1-204ENST00000517554 LINC00158P58513 81 aa12.86□□□□□ -0.35
MTCL1-204ENST00000517554 GAGE10A6NGK3 116 aa12.85□□□□□ -0.35
MTCL1-204ENST00000517554 RPL37AP8A6NKH3 93 aa12.84□□□□□ -0.35
MTCL1-204ENST00000517554 LINC01600Q96MT4 127 aa12.84□□□□□ -0.35
MTCL1-204ENST00000517554 HSBP1L1C9JCN9 74 aa12.83□□□□□ -0.36
MTCL1-204ENST00000517554 J3QQQ9 107 aa12.83□□□□□ -0.36
MTCL1-204ENST00000517554 HERV-K104P63124 156 aa12.83□□□□□ -0.36
MTCL1-204ENST00000517554 PLEKHB2Q96CS7 222 aa12.83□□□□□ -0.36
MTCL1-204ENST00000517554 MYMXA0A1B0GTQ4 84 aa12.81□□□□□ -0.36
MTCL1-204ENST00000517554 NKAPP1Q8N9T2 125 aa12.81□□□□□ -0.36
MTCL1-204ENST00000517554 HERVK_113P61574 105 aa12.81□□□□□ -0.36
MTCL1-204ENST00000517554 MEIG1Q5JSS6 88 aa12.81□□□□□ -0.36
MTCL1-204ENST00000517554 MIR7-3HGQ8N6C7 128 aa12.8□□□□□ -0.36
MTCL1-204ENST00000517554 REG3GQ6UW15 175 aa12.79□□□□□ -0.36
MTCL1-204ENST00000517554 A0A1B0GV90 55 aa12.78□□□□□ -0.36
MTCL1-204ENST00000517554 E9PLD3 99 aa12.78□□□□□ -0.36
MTCL1-204ENST00000517554 IGKV2-28A0A075B6P5 120 aa12.77□□□□□ -0.37
MTCL1-204ENST00000517554 H0Y9J4 135 aa12.77□□□□□ -0.37
MTCL1-204ENST00000517554 IGKV2D-28P01615 120 aa12.77□□□□□ -0.37
MTCL1-204ENST00000517554 KRTAP10-8P60410 259 aa12.77□□□□□ -0.37
MTCL1-204ENST00000517554 RPL24P83731 157 aaKnown RBP12.77□□□□□ -0.37
MTCL1-204ENST00000517554 DIRC1Q969H9 104 aa12.77□□□□□ -0.37
MTCL1-204ENST00000517554 IGLV1-50A0A075B6I6 118 aa12.76□□□□□ -0.37
MTCL1-204ENST00000517554 LGALS3P17931 250 aaKnown RBP12.76□□□□□ -0.37
MTCL1-204ENST00000517554 SLC25A34Q6PIV7 304 aa12.76□□□□□ -0.37
MTCL1-204ENST00000517554 ZNF861PO60384 105 aa12.75□□□□□ -0.37
MTCL1-204ENST00000517554 COX8AP10176 69 aa12.75□□□□□ -0.37
MTCL1-204ENST00000517554 NMUP48645 174 aa12.75□□□□□ -0.37
MTCL1-204ENST00000517554 DAND5Q8N907 189 aa12.75□□□□□ -0.37
MTCL1-204ENST00000517554 BCE1O60756 84 aa12.74□□□□□ -0.37
MTCL1-204ENST00000517554 IGKV2D-26A0A0A0MRZ7 120 aa12.73□□□□□ -0.37
MTCL1-204ENST00000517554 KRTAP1-4P0C5Y4 121 aa12.73□□□□□ -0.37
MTCL1-204ENST00000517554 ANKRD39Q53RE8 183 aa12.73□□□□□ -0.37
MTCL1-204ENST00000517554 BOD1L2Q8IYS8 172 aa12.73□□□□□ -0.37
MTCL1-204ENST00000517554 TMEM238C9JI98 176 aa12.71□□□□□ -0.37
MTCL1-204ENST00000517554 KRTAP13-1Q8IUC0 172 aa12.71□□□□□ -0.37
MTCL1-204ENST00000517554 A0A0J9YXY3 114 aa12.7□□□□□ -0.38
MTCL1-204ENST00000517554 COL5A1-AS1Q5SY13 56 aa12.7□□□□□ -0.38
MTCL1-204ENST00000517554 LOC107984156A0A0G2JMH3 177 aa12.69□□□□□ -0.38
MTCL1-204ENST00000517554 DLEU1O43261 78 aa12.69□□□□□ -0.38
MTCL1-204ENST00000517554 ADAMTSL4-AS1Q5T5F5 129 aa12.69□□□□□ -0.38
MTCL1-204ENST00000517554 ARL17AQ8IVW1 177 aa12.69□□□□□ -0.38
MTCL1-204ENST00000517554 TTTY13Q9BZ97 58 aa12.69□□□□□ -0.38
MTCL1-204ENST00000517554 M0R378 163 aa12.68□□□□□ -0.38
MTCL1-204ENST00000517554 EIF4EBP3O60516 100 aaPredicted RBP12.68□□□□□ -0.38
MTCL1-204ENST00000517554 TMEM126AQ9H061 195 aa12.68□□□□□ -0.38
MTCL1-204ENST00000517554 HMCN2Q8NDA2 5059 aa12.67□□□□□ -0.38
MTCL1-204ENST00000517554 BATFQ16520 125 aa12.67□□□□□ -0.38
MTCL1-204ENST00000517554 C2orf91Q6ZV80 131 aa12.67□□□□□ -0.38
MTCL1-204ENST00000517554 NCR3O14931 201 aa12.66□□□□□ -0.38
MTCL1-204ENST00000517554 RPL28P46779 137 aaKnown RBP12.66□□□□□ -0.38
MTCL1-204ENST00000517554 SOSTDC1Q6X4U4 206 aa12.66□□□□□ -0.38
MTCL1-204ENST00000517554 PRR26Q8N8Z3 221 aa12.66□□□□□ -0.38
MTCL1-204ENST00000517554 HINT1P49773 126 aaPredicted RBP12.65□□□□□ -0.38
MTCL1-204ENST00000517554 LITAFQ99732 161 aa12.65□□□□□ -0.38
MTCL1-204ENST00000517554 PRLHP81277 87 aa12.63□□□□□ -0.39
MTCL1-204ENST00000517554 BVES-AS1Q5T3Y7 98 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms