RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 BEAN1Q3B7T3 259 aa7.68□□□□□ -1.18
PCDHGA1-202ENST00000517417 TMEM258P61165 79 aa7.67□□□□□ -1.18
PCDHGA1-202ENST00000517417 Q6ZTC4 211 aa7.67□□□□□ -1.18
PCDHGA1-202ENST00000517417 Q8IZM0 81 aa7.67□□□□□ -1.18
PCDHGA1-202ENST00000517417 IGLV5-39A0A0G2JS06 123 aa7.67□□□□□ -1.18
PCDHGA1-202ENST00000517417 CSMD2Q7Z408 3487 aa7.67□□□□□ -1.18
PCDHGA1-202ENST00000517417 FLNAP21333 2647 aaKnown RBP7.67□□□□□ -1.18
PCDHGA1-202ENST00000517417 RPL28P46779 137 aaKnown RBP7.67□□□□□ -1.18
PCDHGA1-202ENST00000517417 A0A087WYN8 130 aa7.66□□□□□ -1.18
PCDHGA1-202ENST00000517417 C11orf72Q8NBR9 251 aa7.66□□□□□ -1.18
PCDHGA1-202ENST00000517417 ZFHX3Q15911 3703 aa7.66□□□□□ -1.18
PCDHGA1-202ENST00000517417 SOSTDC1Q6X4U4 206 aa7.66□□□□□ -1.18
PCDHGA1-202ENST00000517417 CELSR2Q9HCU4 2923 aa7.66□□□□□ -1.18
PCDHGA1-202ENST00000517417 HELZ2Q9BYK8 2649 aaKnown RBP7.65□□□□□ -1.18
PCDHGA1-202ENST00000517417 IGLV5-45A0A087WSX0 123 aa7.65□□□□□ -1.18
PCDHGA1-202ENST00000517417 ITPR3Q14573 2671 aa7.65□□□□□ -1.19
PCDHGA1-202ENST00000517417 M0R378 163 aa7.65□□□□□ -1.19
PCDHGA1-202ENST00000517417 SPTSSBQ8NFR3 76 aa7.65□□□□□ -1.19
PCDHGA1-202ENST00000517417 CSDC2Q9Y534 153 aaKnown RBP7.65□□□□□ -1.19
PCDHGA1-202ENST00000517417 ZNF73O43830 326 aaPredicted RBP7.64□□□□□ -1.19
PCDHGA1-202ENST00000517417 HRCT1Q6UXD1 115 aa7.63□□□□□ -1.19
PCDHGA1-202ENST00000517417 LINC00337Q8N6G1 96 aa7.63□□□□□ -1.19
PCDHGA1-202ENST00000517417 FAM218AQ96MZ4 157 aa7.63□□□□□ -1.19
PCDHGA1-202ENST00000517417 USP17L23D6RBM5 183 aa7.63□□□□□ -1.19
PCDHGA1-202ENST00000517417 C16orf95Q9H693 158 aa7.63□□□□□ -1.19
PCDHGA1-202ENST00000517417 A0A087WVE0 104 aa7.63□□□□□ -1.19
PCDHGA1-202ENST00000517417 SERP2Q8N6R1 65 aa7.63□□□□□ -1.19
PCDHGA1-202ENST00000517417 Q6JHZ5 121 aa7.62□□□□□ -1.19
PCDHGA1-202ENST00000517417 COX17Q14061 63 aa7.62□□□□□ -1.19
PCDHGA1-202ENST00000517417 NTM-AS1Q6ZSK4 140 aa7.62□□□□□ -1.19
PCDHGA1-202ENST00000517417 C6orf223Q8N319 242 aa7.61□□□□□ -1.19
PCDHGA1-202ENST00000517417 MPLKIPQ8TAP9 179 aa7.61□□□□□ -1.19
PCDHGA1-202ENST00000517417 TRBV10-3A0A0K0K1G6 114 aa7.61□□□□□ -1.19
PCDHGA1-202ENST00000517417 IGKV4-1P06312 121 aa7.61□□□□□ -1.19
PCDHGA1-202ENST00000517417 CHKB-CPT1BH3BT56 60 aa7.6□□□□□ -1.19
PCDHGA1-202ENST00000517417 WFDC10BQ8IUB3 73 aa7.6□□□□□ -1.19
PCDHGA1-202ENST00000517417 LY6G6CO95867 125 aa7.6□□□□□ -1.19
PCDHGA1-202ENST00000517417 C1orf195Q5TG92 126 aa7.6□□□□□ -1.19
PCDHGA1-202ENST00000517417 MRPL55Q7Z7F7 128 aaKnown RBP7.59□□□□□ -1.19
PCDHGA1-202ENST00000517417 SMCR5Q8TEV8 140 aa7.59□□□□□ -1.19
PCDHGA1-202ENST00000517417 SPINK6Q6UWN8 80 aa7.59□□□□□ -1.19
PCDHGA1-202ENST00000517417 LINC00846Q9NV44 126 aa7.59□□□□□ -1.19
PCDHGA1-202ENST00000517417 LOC107984640A0A0U1RRK4 108 aa7.58□□□□□ -1.2
PCDHGA1-202ENST00000517417 ZANQ9Y493 2812 aa7.58□□□□□ -1.2
PCDHGA1-202ENST00000517417 A8MTW9 85 aa7.58□□□□□ -1.2
PCDHGA1-202ENST00000517417 EGFEM1PQ0D2K5 195 aa7.58□□□□□ -1.2
PCDHGA1-202ENST00000517417 ATP5EP2Q5VTU8 51 aa7.58□□□□□ -1.2
PCDHGA1-202ENST00000517417 SEC61GP60059 68 aa7.57□□□□□ -1.2
PCDHGA1-202ENST00000517417 TEP1Q99973 2627 aaKnown RBP7.57□□□□□ -1.2
PCDHGA1-202ENST00000517417 WFDC13Q8IUB5 93 aa7.57□□□□□ -1.2
PCDHGA1-202ENST00000517417 DHRS4-AS1Q9P1J3 65 aa7.57□□□□□ -1.2
PCDHGA1-202ENST00000517417 LYPD5Q6UWN5 251 aa7.56□□□□□ -1.2
PCDHGA1-202ENST00000517417 A0A1B0GUV1 79 aa7.56□□□□□ -1.2
PCDHGA1-202ENST00000517417 Q8N814 137 aa7.55□□□□□ -1.2
PCDHGA1-202ENST00000517417 CHD6Q8TD26 2715 aa7.55□□□□□ -1.2
PCDHGA1-202ENST00000517417 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.55□□□□□ -1.2
PCDHGA1-202ENST00000517417 CELA1Q9UNI1 258 aa7.55□□□□□ -1.2
PCDHGA1-202ENST00000517417 SNURFQ9Y675 71 aa7.55□□□□□ -1.2
PCDHGA1-202ENST00000517417 IGLV9-49A0A0B4J1Y8 123 aa7.55□□□□□ -1.2
PCDHGA1-202ENST00000517417 FAM104AQ969W3 186 aa7.54□□□□□ -1.2
PCDHGA1-202ENST00000517417 SETXQ7Z333 2677 aaKnown RBP7.54□□□□□ -1.2
PCDHGA1-202ENST00000517417 LINC01600Q96MT4 127 aa7.53□□□□□ -1.2
PCDHGA1-202ENST00000517417 PRR4Q16378 134 aa7.53□□□□□ -1.2
PCDHGA1-202ENST00000517417 IGHV3OR16-9A0A0B4J2B5 98 aa7.53□□□□□ -1.2
PCDHGA1-202ENST00000517417 PLAC8L1A1L4L8 177 aa7.52□□□□□ -1.21
PCDHGA1-202ENST00000517417 MUC7Q8TAX7 377 aa7.52□□□□□ -1.21
PCDHGA1-202ENST00000517417 C7orf33Q8WU49 177 aa7.52□□□□□ -1.21
PCDHGA1-202ENST00000517417 FAM236DA0A1B0GTK5 79 aa7.52□□□□□ -1.21
PCDHGA1-202ENST00000517417 FAM236CP0DP71 79 aa7.52□□□□□ -1.21
PCDHGA1-202ENST00000517417 NDUFC2-KCTD14E9PQ53 114 aa7.51□□□□□ -1.21
PCDHGA1-202ENST00000517417 CRYGAP11844 174 aa7.51□□□□□ -1.21
PCDHGA1-202ENST00000517417 FBN2P35556 2912 aa7.51□□□□□ -1.21
PCDHGA1-202ENST00000517417 FAM19A3Q7Z5A8 133 aa7.5□□□□□ -1.21
PCDHGA1-202ENST00000517417 Q6ZRU5 148 aa7.5□□□□□ -1.21
PCDHGA1-202ENST00000517417 C1orf137Q5JT78 98 aa7.49□□□□□ -1.21
PCDHGA1-202ENST00000517417 TEX15Q9BXT5 2789 aa7.47□□□□□ -1.21
PCDHGA1-202ENST00000517417 Q8N3U1 123 aa7.47□□□□□ -1.21
PCDHGA1-202ENST00000517417 LINC00474Q9P2X8 69 aa7.46□□□□□ -1.22
PCDHGA1-202ENST00000517417 REG3GQ6UW15 175 aa7.46□□□□□ -1.22
PCDHGA1-202ENST00000517417 NUPR2A6NF83 97 aa7.45□□□□□ -1.22
PCDHGA1-202ENST00000517417 ESRGQ1W209 222 aa7.45□□□□□ -1.22
PCDHGA1-202ENST00000517417 FAM30AQ9NZY2 134 aa7.45□□□□□ -1.22
PCDHGA1-202ENST00000517417 X6R8D5 127 aa7.45□□□□□ -1.22
PCDHGA1-202ENST00000517417 STAB1Q9NY15 2570 aa7.45□□□□□ -1.22
PCDHGA1-202ENST00000517417 C9orf129Q5T035 196 aaKnown RBP7.44□□□□□ -1.22
PCDHGA1-202ENST00000517417 CASC2Q6XLA1 102 aa7.44□□□□□ -1.22
PCDHGA1-202ENST00000517417 LINC00575Q6W349 94 aa7.44□□□□□ -1.22
PCDHGA1-202ENST00000517417 DEFB116Q30KQ4 102 aa7.43□□□□□ -1.22
PCDHGA1-202ENST00000517417 MXRA5Q9NR99 2828 aa7.43□□□□□ -1.22
PCDHGA1-202ENST00000517417 C2orf48Q96LS8 159 aa7.43□□□□□ -1.22
PCDHGA1-202ENST00000517417 ZNF706Q9Y5V0 76 aaPredicted RBP7.43□□□□□ -1.22
PCDHGA1-202ENST00000517417 UBR5O95071 2799 aaPredicted RBP7.43□□□□□ -1.22
PCDHGA1-202ENST00000517417 FSHBP01225 129 aa7.43□□□□□ -1.22
PCDHGA1-202ENST00000517417 PRLHP81277 87 aa7.43□□□□□ -1.22
PCDHGA1-202ENST00000517417 C10orf25Q5T742 122 aa7.43□□□□□ -1.22
PCDHGA1-202ENST00000517417 TRAV7A0A075B6U4 112 aa7.42□□□□□ -1.22
PCDHGA1-202ENST00000517417 NBPF19A0A087WUL8 3843 aa7.42□□□□□ -1.22
PCDHGA1-202ENST00000517417 KRTAP24-1Q3LI83 254 aa7.42□□□□□ -1.22
PCDHGA1-202ENST00000517417 A0A087WSZ3 146 aa7.41□□□□□ -1.22
PCDHGA1-202ENST00000517417 LINC01556Q5JQF7 62 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms