RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 LTC4SQ16873 150 aa-1.08□□□□□ -2.58
SCARNA1-201ENST00000517138 LIN52Q52LA3 116 aa-1.08□□□□□ -2.58
SCARNA1-201ENST00000517138 C10orf128Q5T292 105 aa-1.08□□□□□ -2.58
SCARNA1-201ENST00000517138 C3orf33Q6P1S2 294 aa-1.08□□□□□ -2.58
SCARNA1-201ENST00000517138 IFT20Q8IY31 132 aa-1.08□□□□□ -2.58
SCARNA1-201ENST00000517138 NEK7Q8TDX7 302 aa-1.08□□□□□ -2.58
SCARNA1-201ENST00000517138 PRAP1Q96NZ9 151 aa-1.08□□□□□ -2.58
SCARNA1-201ENST00000517138 TRBV7-1A0A0A6YYK4 115 aa-1.09□□□□□ -2.58
SCARNA1-201ENST00000517138 HIST1H2BKO60814 126 aa-1.09□□□□□ -2.58
SCARNA1-201ENST00000517138 HIST1H2BJP06899 126 aa-1.09□□□□□ -2.58
SCARNA1-201ENST00000517138 IFITM1P13164 125 aa-1.09□□□□□ -2.58
SCARNA1-201ENST00000517138 TAS2R41P59536 307 aa-1.09□□□□□ -2.58
SCARNA1-201ENST00000517138 NCALDP61601 193 aa-1.09□□□□□ -2.58
SCARNA1-201ENST00000517138 PTRHD1Q6GMV3 140 aaKnown RBP-1.09□□□□□ -2.58
SCARNA1-201ENST00000517138 AKAP14Q86UN6 197 aa-1.09□□□□□ -2.58
SCARNA1-201ENST00000517138 C20orf197Q8N268 126 aa-1.09□□□□□ -2.58
SCARNA1-201ENST00000517138 PHB2Q99623 299 aa-1.09□□□□□ -2.58
SCARNA1-201ENST00000517138 MRPL35Q9NZE8 188 aaKnown RBP-1.09□□□□□ -2.58
SCARNA1-201ENST00000517138 SS18L2Q9UHA2 77 aa-1.09□□□□□ -2.58
SCARNA1-201ENST00000517138 TRBV10-3A0A0K0K1G6 114 aa-1.1□□□□□ -2.59
SCARNA1-201ENST00000517138 MMP24-AS1A0A0U1RRL7 71 aa-1.1□□□□□ -2.59
SCARNA1-201ENST00000517138 TRGC2P03986 189 aa-1.1□□□□□ -2.59
SCARNA1-201ENST00000517138 HSD11B1P28845 292 aa-1.1□□□□□ -2.59
SCARNA1-201ENST00000517138 DNAJB13P59910 316 aa-1.1□□□□□ -2.59
SCARNA1-201ENST00000517138 TOMM20LQ6UXN7 152 aa-1.1□□□□□ -2.59
SCARNA1-201ENST00000517138 GPX7Q96SL4 187 aaPredicted RBP-1.1□□□□□ -2.59
SCARNA1-201ENST00000517138 TRAV12-3A0A0B4J271 114 aa-1.11□□□□□ -2.59
SCARNA1-201ENST00000517138 TRBV10-1A0A0K0K1A3 114 aa-1.11□□□□□ -2.59
SCARNA1-201ENST00000517138 HSPE1P61604 102 aaKnown RBP-1.11□□□□□ -2.59
SCARNA1-201ENST00000517138 TMED2Q15363 201 aa-1.11□□□□□ -2.59
SCARNA1-201ENST00000517138 HACD4Q5VWC8 232 aa-1.11□□□□□ -2.59
SCARNA1-201ENST00000517138 ALKAL2Q6UX46 152 aa-1.11□□□□□ -2.59
SCARNA1-201ENST00000517138 PP6455Q8WZ26 134 aa-1.11□□□□□ -2.59
SCARNA1-201ENST00000517138 TMEM203Q969S6 136 aa-1.11□□□□□ -2.59
SCARNA1-201ENST00000517138 DSCR8Q96T75 97 aa-1.11□□□□□ -2.59
SCARNA1-201ENST00000517138 EFCAB11Q9BUY7 163 aa-1.11□□□□□ -2.59
SCARNA1-201ENST00000517138 OR2H1Q9GZK4 316 aa-1.11□□□□□ -2.59
SCARNA1-201ENST00000517138 SH3BGRL3Q9H299 93 aa-1.11□□□□□ -2.59
SCARNA1-201ENST00000517138 PRO1933Q9H354 126 aa-1.11□□□□□ -2.59
SCARNA1-201ENST00000517138 CPSF4LA6NMK7 179 aaKnown RBP-1.12□□□□□ -2.59
SCARNA1-201ENST00000517138 HCG22E2RYF7 251 aa-1.12□□□□□ -2.59
SCARNA1-201ENST00000517138 NCR2O95944 276 aa-1.12□□□□□ -2.59
SCARNA1-201ENST00000517138 PAEPP09466 180 aa-1.12□□□□□ -2.59
SCARNA1-201ENST00000517138 TAF9BQ9HBM6 251 aa-1.12□□□□□ -2.59
SCARNA1-201ENST00000517138 SLC22A13Q9Y226 551 aa-1.12□□□□□ -2.59
SCARNA1-201ENST00000517138 TPRKBQ9Y3C4 175 aa-1.12□□□□□ -2.59
SCARNA1-201ENST00000517138 LOC100130705A0A1B0GUX0 176 aa-1.13□□□□□ -2.59
SCARNA1-201ENST00000517138 D6R8Y8 96 aa-1.13□□□□□ -2.59
SCARNA1-201ENST00000517138 NDUFC1O43677 76 aa-1.13□□□□□ -2.59
SCARNA1-201ENST00000517138 CFDP00746 253 aaPredicted RBP-1.13□□□□□ -2.59
SCARNA1-201ENST00000517138 HIST1H1AQ02539 215 aaPredicted RBP-1.13□□□□□ -2.59
SCARNA1-201ENST00000517138 CFAP126Q5VTH2 177 aa-1.13□□□□□ -2.59
SCARNA1-201ENST00000517138 OR5AK2Q8NH90 309 aa-1.13□□□□□ -2.59
SCARNA1-201ENST00000517138 CLEC2BQ92478 149 aa-1.13□□□□□ -2.59
SCARNA1-201ENST00000517138 AP1S3Q96PC3 154 aa-1.13□□□□□ -2.59
SCARNA1-201ENST00000517138 GINS3Q9BRX5 216 aa-1.13□□□□□ -2.59
SCARNA1-201ENST00000517138 C9orf16Q9BUW7 83 aa-1.13□□□□□ -2.59
SCARNA1-201ENST00000517138 TRBV7-7A0A0K0K1E9 115 aa-1.14□□□□□ -2.59
SCARNA1-201ENST00000517138 K7EIM0 57 aa-1.14□□□□□ -2.59
SCARNA1-201ENST00000517138 NDUFA1O15239 70 aa-1.14□□□□□ -2.59
SCARNA1-201ENST00000517138 HBBP68871 147 aa-1.14□□□□□ -2.59
SCARNA1-201ENST00000517138 POU6F1Q14863 301 aa-1.14□□□□□ -2.59
SCARNA1-201ENST00000517138 SPA17Q15506 151 aa-1.14□□□□□ -2.59
SCARNA1-201ENST00000517138 SMIM21Q3B7S5 101 aa-1.14□□□□□ -2.59
SCARNA1-201ENST00000517138 Q56UQ5 140 aa-1.14□□□□□ -2.59
SCARNA1-201ENST00000517138 IDO2Q6ZQW0 420 aa-1.14□□□□□ -2.59
SCARNA1-201ENST00000517138 AQP10Q96PS8 301 aa-1.14□□□□□ -2.59
SCARNA1-201ENST00000517138 RPRMQ9NS64 109 aa-1.14□□□□□ -2.59
SCARNA1-201ENST00000517138 MRPL36Q9P0J6 103 aaKnown RBP-1.14□□□□□ -2.59
SCARNA1-201ENST00000517138 C3orf85A0A1B0GTC6 90 aa-1.15□□□□□ -2.59
SCARNA1-201ENST00000517138 NDUFC2O95298 119 aa-1.15□□□□□ -2.59
SCARNA1-201ENST00000517138 CST2P09228 141 aa-1.15□□□□□ -2.59
SCARNA1-201ENST00000517138 C3orf79P0CE67 100 aa-1.15□□□□□ -2.59
SCARNA1-201ENST00000517138 PKIAP61925 76 aa-1.15□□□□□ -2.59
SCARNA1-201ENST00000517138 DEFB106AQ8N104 65 aa-1.15□□□□□ -2.59
SCARNA1-201ENST00000517138 PAIP2Q9BPZ3 127 aaKnown RBP-1.15□□□□□ -2.59
SCARNA1-201ENST00000517138 SCN3BQ9NY72 215 aa-1.15□□□□□ -2.59
SCARNA1-201ENST00000517138 NOP16Q9Y3C1 178 aaKnown RBP-1.15□□□□□ -2.59
SCARNA1-201ENST00000517138 MFSD11O43934 449 aa-1.16□□□□□ -2.6
SCARNA1-201ENST00000517138 ATP5HO75947 161 aa-1.16□□□□□ -2.6
SCARNA1-201ENST00000517138 SAA2P0DJI9 122 aaPredicted RBP-1.16□□□□□ -2.6
SCARNA1-201ENST00000517138 HIST1H1BP16401 226 aaKnown RBP-1.16□□□□□ -2.6
SCARNA1-201ENST00000517138 GNG5P63218 68 aa-1.16□□□□□ -2.6
SCARNA1-201ENST00000517138 RPL39P5Q59GN2 51 aa-1.16□□□□□ -2.6
SCARNA1-201ENST00000517138 C1orf140Q5VVS0 124 aa-1.16□□□□□ -2.6
SCARNA1-201ENST00000517138 THEM6Q8WUY1 208 aa-1.16□□□□□ -2.6
SCARNA1-201ENST00000517138 M0R2P5 195 aa-1.17□□□□□ -2.6
SCARNA1-201ENST00000517138 CDC42EP2O14613 210 aa-1.17□□□□□ -2.6
SCARNA1-201ENST00000517138 FABP4P15090 132 aa-1.17□□□□□ -2.6
SCARNA1-201ENST00000517138 RPL22P35268 128 aaKnown RBP-1.17□□□□□ -2.6
SCARNA1-201ENST00000517138 LINC01590Q5TEZ4 76 aa-1.17□□□□□ -2.6
SCARNA1-201ENST00000517138 IL20Q9NYY1 176 aa-1.17□□□□□ -2.6
SCARNA1-201ENST00000517138 COMMD3Q9UBI1 195 aa-1.17□□□□□ -2.6
SCARNA1-201ENST00000517138 LAMTOR3Q9UHA4 124 aa-1.17□□□□□ -2.6
SCARNA1-201ENST00000517138 TRBV25-1A0A075B6N4 114 aa-1.18□□□□□ -2.6
SCARNA1-201ENST00000517138 ETDCA0A1B0GVM5 59 aa-1.18□□□□□ -2.6
SCARNA1-201ENST00000517138 IGLC7A0M8Q6 106 aa-1.18□□□□□ -2.6
SCARNA1-201ENST00000517138 TMEM210A6NLX4 147 aa-1.18□□□□□ -2.6
SCARNA1-201ENST00000517138 KPNA4O00629 521 aaPredicted RBP-1.18□□□□□ -2.6
SCARNA1-201ENST00000517138 SIX6O95475 246 aa-1.18□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms