RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 RAB4AP20338 218 aa0.78□□□□□ -2.28
RNU1-48P-201ENST00000516400 BTCP35070 178 aa0.78□□□□□ -2.28
RNU1-48P-201ENST00000516400 BCAP31P51572 246 aa0.78□□□□□ -2.28
RNU1-48P-201ENST00000516400 NDUFA6P56556 154 aa0.78□□□□□ -2.28
RNU1-48P-201ENST00000516400 SPINK7P58062 85 aa0.78□□□□□ -2.28
RNU1-48P-201ENST00000516400 RAB14P61106 215 aa0.78□□□□□ -2.28
RNU1-48P-201ENST00000516400 GNGT1P63211 74 aa0.78□□□□□ -2.28
RNU1-48P-201ENST00000516400 H1FX-AS1Q4G0G2 97 aa0.78□□□□□ -2.28
RNU1-48P-201ENST00000516400 C2orf66Q6UXQ4 117 aa0.78□□□□□ -2.28
RNU1-48P-201ENST00000516400 LITAFQ99732 161 aa0.78□□□□□ -2.28
RNU1-48P-201ENST00000516400 EIF5A2Q9GZV4 153 aaKnown RBP0.78□□□□□ -2.28
RNU1-48P-201ENST00000516400 PRO1933Q9H354 126 aa0.78□□□□□ -2.28
RNU1-48P-201ENST00000516400 ST20Q9HBF5 79 aa0.78□□□□□ -2.28
RNU1-48P-201ENST00000516400 TMEM167BQ9NRX6 74 aa0.78□□□□□ -2.28
RNU1-48P-201ENST00000516400 TOMM7Q9P0U1 55 aa0.78□□□□□ -2.28
RNU1-48P-201ENST00000516400 TRBV24-1A0A075B6N3 115 aa0.77□□□□□ -2.29
RNU1-48P-201ENST00000516400 A0A1W2PPV4 95 aa0.77□□□□□ -2.29
RNU1-48P-201ENST00000516400 C17orf112F2Z3M2 114 aa0.77□□□□□ -2.29
RNU1-48P-201ENST00000516400 CXorf1O96002 111 aa0.77□□□□□ -2.29
RNU1-48P-201ENST00000516400 ATP6V0CP27449 155 aa0.77□□□□□ -2.29
RNU1-48P-201ENST00000516400 CXCL5P42830 114 aa0.77□□□□□ -2.29
RNU1-48P-201ENST00000516400 CDC34P49427 236 aaPredicted RBP0.77□□□□□ -2.29
RNU1-48P-201ENST00000516400 AQP4P55087 323 aa0.77□□□□□ -2.29
RNU1-48P-201ENST00000516400 HBBP68871 147 aa0.77□□□□□ -2.29
RNU1-48P-201ENST00000516400 RPL24P83731 157 aaKnown RBP0.77□□□□□ -2.29
RNU1-48P-201ENST00000516400 LCE1FQ5T754 118 aa0.77□□□□□ -2.29
RNU1-48P-201ENST00000516400 STX12Q86Y82 276 aa0.77□□□□□ -2.29
RNU1-48P-201ENST00000516400 SVIPQ8NHG7 77 aa0.77□□□□□ -2.29
RNU1-48P-201ENST00000516400 MT1LQ93083 61 aa0.77□□□□□ -2.29
RNU1-48P-201ENST00000516400 MRPS26Q9BYN8 205 aaKnown RBP0.77□□□□□ -2.29
RNU1-48P-201ENST00000516400 NKX6-2Q9C056 277 aaPredicted RBP0.77□□□□□ -2.29
RNU1-48P-201ENST00000516400 SPANXA1Q9NS26 97 aa0.77□□□□□ -2.29
RNU1-48P-201ENST00000516400 KCNIP2Q9NS61 270 aa0.77□□□□□ -2.29
RNU1-48P-201ENST00000516400 MCUBQ9NWR8 336 aa0.77□□□□□ -2.29
RNU1-48P-201ENST00000516400 ETDCA0A1B0GVM5 59 aa0.76□□□□□ -2.29
RNU1-48P-201ENST00000516400 A8MU10 97 aa0.76□□□□□ -2.29
RNU1-48P-201ENST00000516400 D6R8Y8 96 aa0.76□□□□□ -2.29
RNU1-48P-201ENST00000516400 H0YAA0 97 aa0.76□□□□□ -2.29
RNU1-48P-201ENST00000516400 SMKR1H3BMG3 65 aa0.76□□□□□ -2.29
RNU1-48P-201ENST00000516400 AKR1D1P51857 326 aa0.76□□□□□ -2.29
RNU1-48P-201ENST00000516400 AP3S2P59780 193 aa0.76□□□□□ -2.29
RNU1-48P-201ENST00000516400 LSM3P62310 102 aaKnown RBP0.76□□□□□ -2.29
RNU1-48P-201ENST00000516400 MCFD2Q8NI22 146 aa0.76□□□□□ -2.29
RNU1-48P-201ENST00000516400 CNBD2Q96M20 576 aa0.76□□□□□ -2.29
RNU1-48P-201ENST00000516400 FUNDC2Q9BWH2 189 aa0.76□□□□□ -2.29
RNU1-48P-201ENST00000516400 TRBV20OR9-2A0A075B6H5 130 aa0.75□□□□□ -2.29
RNU1-48P-201ENST00000516400 IGIPA6NJ69 53 aa0.75□□□□□ -2.29
RNU1-48P-201ENST00000516400 FAM25AB3EWG3 89 aa0.75□□□□□ -2.29
RNU1-48P-201ENST00000516400 FAM25CB3EWG5 89 aa0.75□□□□□ -2.29
RNU1-48P-201ENST00000516400 FAM25GB3EWG6 89 aa0.75□□□□□ -2.29
RNU1-48P-201ENST00000516400 ATP5HO75947 161 aa0.75□□□□□ -2.29
RNU1-48P-201ENST00000516400 TCL1BO95988 128 aa0.75□□□□□ -2.29
RNU1-48P-201ENST00000516400 PFN2P35080 140 aa0.75□□□□□ -2.29
RNU1-48P-201ENST00000516400 VBP1P61758 197 aa0.75□□□□□ -2.29
RNU1-48P-201ENST00000516400 UBE2G1P62253 170 aa0.75□□□□□ -2.29
RNU1-48P-201ENST00000516400 SMAGPQ0VAQ4 97 aa0.75□□□□□ -2.29
RNU1-48P-201ENST00000516400 COX17Q14061 63 aa0.75□□□□□ -2.29
RNU1-48P-201ENST00000516400 ZNF345Q14585 488 aa0.75□□□□□ -2.29
RNU1-48P-201ENST00000516400 PDZD11Q5EBL8 140 aa0.75□□□□□ -2.29
RNU1-48P-201ENST00000516400 LCE3AQ5TA76 89 aa0.75□□□□□ -2.29
RNU1-48P-201ENST00000516400 PP632Q6XCG6 107 aa0.75□□□□□ -2.29
RNU1-48P-201ENST00000516400 TMEM136Q6ZRR5 245 aa0.75□□□□□ -2.29
RNU1-48P-201ENST00000516400 BAGE2Q86Y30 109 aa0.75□□□□□ -2.29
RNU1-48P-201ENST00000516400 COX7B2Q8TF08 81 aa0.75□□□□□ -2.29
RNU1-48P-201ENST00000516400 TCEAL7Q9BRU2 100 aa0.75□□□□□ -2.29
RNU1-48P-201ENST00000516400 PSMG3Q9BT73 122 aaPredicted RBP0.75□□□□□ -2.29
RNU1-48P-201ENST00000516400 TPPP3Q9BW30 176 aa0.75□□□□□ -2.29
RNU1-48P-201ENST00000516400 TMEM191AQ9H0A3 160 aa0.75□□□□□ -2.29
RNU1-48P-201ENST00000516400 CRIPTQ9P021 101 aa0.75□□□□□ -2.29
RNU1-48P-201ENST00000516400 HSPB11Q9Y547 144 aa0.75□□□□□ -2.29
RNU1-48P-201ENST00000516400 S100A9P06702 114 aaKnown RBP0.74□□□□□ -2.29
RNU1-48P-201ENST00000516400 PVALBP20472 110 aaPredicted RBP0.74□□□□□ -2.29
RNU1-48P-201ENST00000516400 DSCR10P59022 87 aa0.74□□□□□ -2.29
RNU1-48P-201ENST00000516400 TMUB2Q71RG4 321 aa0.74□□□□□ -2.29
RNU1-48P-201ENST00000516400 WFDC13Q8IUB5 93 aa0.74□□□□□ -2.29
RNU1-48P-201ENST00000516400 TMEM141Q96I45 108 aa0.74□□□□□ -2.29
RNU1-48P-201ENST00000516400 ERG28Q9UKR5 140 aa0.74□□□□□ -2.29
RNU1-48P-201ENST00000516400 TNFSF18Q9UNG2 199 aa0.74□□□□□ -2.29
RNU1-48P-201ENST00000516400 IGLV5-48A0A075B6I7 105 aa0.73□□□□□ -2.29
RNU1-48P-201ENST00000516400 TRBV7-7A0A0K0K1E9 115 aa0.73□□□□□ -2.29
RNU1-48P-201ENST00000516400 FAM236AA0A1B0GUQ0 79 aa0.73□□□□□ -2.29
RNU1-48P-201ENST00000516400 FAM236BA0A1B0GV22 79 aa0.73□□□□□ -2.29
RNU1-48P-201ENST00000516400 PHGR1C9JFL3 82 aa0.73□□□□□ -2.29
RNU1-48P-201ENST00000516400 FCER1GP30273 86 aa0.73□□□□□ -2.29
RNU1-48P-201ENST00000516400 SERF2P84101 59 aa0.73□□□□□ -2.29
RNU1-48P-201ENST00000516400 PAPPA-AS1Q5QFB9 102 aa0.73□□□□□ -2.29
RNU1-48P-201ENST00000516400 AMN1Q8IY45 258 aa0.73□□□□□ -2.29
RNU1-48P-201ENST00000516400 C20orf78Q9BR46 151 aa0.73□□□□□ -2.29
RNU1-48P-201ENST00000516400 LAMTOR3Q9UHA4 124 aa0.73□□□□□ -2.29
RNU1-48P-201ENST00000516400 V9GYH0 126 aa0.73□□□□□ -2.29
RNU1-48P-201ENST00000516400 A0A087WSZ3 146 aa0.72□□□□□ -2.29
RNU1-48P-201ENST00000516400 CTXND1A0A1B0GTU2 59 aa0.72□□□□□ -2.29
RNU1-48P-201ENST00000516400 NCR3O14931 201 aa0.72□□□□□ -2.29
RNU1-48P-201ENST00000516400 TCAPO15273 167 aa0.72□□□□□ -2.29
RNU1-48P-201ENST00000516400 AKR1C3P42330 323 aa0.72□□□□□ -2.29
RNU1-48P-201ENST00000516400 RPL35P42766 123 aaKnown RBP0.72□□□□□ -2.29
RNU1-48P-201ENST00000516400 HERVK_113P63121 156 aa0.72□□□□□ -2.29
RNU1-48P-201ENST00000516400 NEDD8Q15843 81 aa0.72□□□□□ -2.29
RNU1-48P-201ENST00000516400 MRPL51Q4U2R6 128 aaKnown RBP0.72□□□□□ -2.29
RNU1-48P-201ENST00000516400 LCE3CQ5T5A8 94 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 787 ms