RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 SCGB1D1O95968 90 aa9.09□□□□□ -0.95
HMGCLL1-209ENST00000515546 JOSD1Q15040 202 aaPredicted RBP9.09□□□□□ -0.95
HMGCLL1-209ENST00000515546 COX7B2Q8TF08 81 aa9.09□□□□□ -0.95
HMGCLL1-209ENST00000515546 IGLV5-39A0A0G2JS06 123 aa9.08□□□□□ -0.96
HMGCLL1-209ENST00000515546 AKR1D1P51857 326 aa9.08□□□□□ -0.96
HMGCLL1-209ENST00000515546 PYY3Q5JQD4 70 aa9.08□□□□□ -0.96
HMGCLL1-209ENST00000515546 C1orf137Q5JT78 98 aa9.08□□□□□ -0.96
HMGCLL1-209ENST00000515546 REG3GQ6UW15 175 aa9.08□□□□□ -0.96
HMGCLL1-209ENST00000515546 IGLV7-43P04211 117 aa9.06□□□□□ -0.96
HMGCLL1-209ENST00000515546 TSPEAR-AS2P59090 65 aa9.05□□□□□ -0.96
HMGCLL1-209ENST00000515546 KRTAP10-8P60410 259 aa9.05□□□□□ -0.96
HMGCLL1-209ENST00000515546 ANKRD39Q53RE8 183 aa9.05□□□□□ -0.96
HMGCLL1-209ENST00000515546 XAGE1AQ9HD64 81 aa9.05□□□□□ -0.96
HMGCLL1-209ENST00000515546 UBR4Q5T4S7 5183 aa9.04□□□□□ -0.96
HMGCLL1-209ENST00000515546 IGKV2D-26A0A0A0MRZ7 120 aa9.04□□□□□ -0.96
HMGCLL1-209ENST00000515546 PLA2G2DQ9UNK4 145 aa9.04□□□□□ -0.96
HMGCLL1-209ENST00000515546 E9PLD3 99 aa9.03□□□□□ -0.96
HMGCLL1-209ENST00000515546 UBE2BP63146 152 aa9.03□□□□□ -0.96
HMGCLL1-209ENST00000515546 LEPROTO15243 131 aa9.02□□□□□ -0.97
HMGCLL1-209ENST00000515546 HERVK_113P61574 105 aa9.02□□□□□ -0.97
HMGCLL1-209ENST00000515546 TP73-AS1Q9UF72 201 aa9.02□□□□□ -0.97
HMGCLL1-209ENST00000515546 DIRC1Q969H9 104 aa9.01□□□□□ -0.97
HMGCLL1-209ENST00000515546 C22orf24Q9Y442 160 aa9.01□□□□□ -0.97
HMGCLL1-209ENST00000515546 H0Y9J4 135 aa9□□□□□ -0.97
HMGCLL1-209ENST00000515546 J3QQQ9 107 aa9□□□□□ -0.97
HMGCLL1-209ENST00000515546 PLEKHB2Q96CS7 222 aa9□□□□□ -0.97
HMGCLL1-209ENST00000515546 LBHQ53QV2 105 aaPredicted RBP8.99□□□□□ -0.97
HMGCLL1-209ENST00000515546 ZNF625Q96I27 306 aaPredicted RBP8.99□□□□□ -0.97
HMGCLL1-209ENST00000515546 TTTY13Q9BZ97 58 aa8.99□□□□□ -0.97
HMGCLL1-209ENST00000515546 IGLV5-37A0A075B6J1 123 aa8.98□□□□□ -0.97
HMGCLL1-209ENST00000515546 MRPL55Q7Z7F7 128 aaKnown RBP8.98□□□□□ -0.97
HMGCLL1-209ENST00000515546 HSBP1L1C9JCN9 74 aa8.97□□□□□ -0.97
HMGCLL1-209ENST00000515546 SMIM6P0DI80 62 aa8.97□□□□□ -0.97
HMGCLL1-209ENST00000515546 NMUP48645 174 aa8.97□□□□□ -0.97
HMGCLL1-209ENST00000515546 VAMP8Q9BV40 100 aa8.97□□□□□ -0.97
HMGCLL1-209ENST00000515546 PAM16Q9Y3D7 125 aa8.97□□□□□ -0.97
HMGCLL1-209ENST00000515546 LGALS3P17931 250 aaKnown RBP8.96□□□□□ -0.98
HMGCLL1-209ENST00000515546 PCP2Q8IVA1 136 aa8.96□□□□□ -0.98
HMGCLL1-209ENST00000515546 NDUFA12Q9UI09 145 aa8.96□□□□□ -0.98
HMGCLL1-209ENST00000515546 KRTAP1-4P0C5Y4 121 aa8.95□□□□□ -0.98
HMGCLL1-209ENST00000515546 SPATA45Q537H7 98 aa8.95□□□□□ -0.98
HMGCLL1-209ENST00000515546 SFTA2Q6UW10 78 aa8.95□□□□□ -0.98
HMGCLL1-209ENST00000515546 ERG28Q9UKR5 140 aa8.95□□□□□ -0.98
HMGCLL1-209ENST00000515546 ZNF861PO60384 105 aa8.93□□□□□ -0.98
HMGCLL1-209ENST00000515546 PFN2P35080 140 aa8.93□□□□□ -0.98
HMGCLL1-209ENST00000515546 COX17Q14061 63 aa8.93□□□□□ -0.98
HMGCLL1-209ENST00000515546 LINC00167Q96N53 147 aa8.93□□□□□ -0.98
HMGCLL1-209ENST00000515546 MYMXA0A1B0GTQ4 84 aa8.92□□□□□ -0.98
HMGCLL1-209ENST00000515546 ZNF815PA8K554 130 aa8.92□□□□□ -0.98
HMGCLL1-209ENST00000515546 BCE1O60756 84 aa8.92□□□□□ -0.98
HMGCLL1-209ENST00000515546 SND1-IT1Q9HBX3 110 aa8.92□□□□□ -0.98
HMGCLL1-209ENST00000515546 LRP2P98164 4655 aa8.91□□□□□ -0.98
HMGCLL1-209ENST00000515546 A0A0J9YXY3 114 aa8.91□□□□□ -0.98
HMGCLL1-209ENST00000515546 PRR26Q8N8Z3 221 aa8.91□□□□□ -0.98
HMGCLL1-209ENST00000515546 IGLV1-50A0A075B6I6 118 aa8.9□□□□□ -0.98
HMGCLL1-209ENST00000515546 GAGE10A6NGK3 116 aa8.9□□□□□ -0.98
HMGCLL1-209ENST00000515546 COX8AP10176 69 aa8.9□□□□□ -0.98
HMGCLL1-209ENST00000515546 VPREB1P12018 145 aa8.9□□□□□ -0.98
HMGCLL1-209ENST00000515546 HERV-K104P63124 156 aa8.9□□□□□ -0.98
HMGCLL1-209ENST00000515546 NKAPP1Q8N9T2 125 aa8.9□□□□□ -0.98
HMGCLL1-209ENST00000515546 C14orf144Q96I85 54 aa8.9□□□□□ -0.98
HMGCLL1-209ENST00000515546 RPL37AP8A6NKH3 93 aa8.89□□□□□ -0.99
HMGCLL1-209ENST00000515546 BOD1L2Q8IYS8 172 aa8.89□□□□□ -0.99
HMGCLL1-209ENST00000515546 C12orf57Q99622 126 aa8.89□□□□□ -0.99
HMGCLL1-209ENST00000515546 SMIM13P0DJ93 91 aa8.88□□□□□ -0.99
HMGCLL1-209ENST00000515546 RPL28P46779 137 aaKnown RBP8.88□□□□□ -0.99
HMGCLL1-209ENST00000515546 S100A12P80511 92 aa8.88□□□□□ -0.99
HMGCLL1-209ENST00000515546 KRTAP13-1Q8IUC0 172 aa8.88□□□□□ -0.99
HMGCLL1-209ENST00000515546 Q8NDZ9 215 aa8.88□□□□□ -0.99
HMGCLL1-209ENST00000515546 LITAFQ99732 161 aa8.88□□□□□ -0.99
HMGCLL1-209ENST00000515546 A0A0U1RRA0 63 aa8.87□□□□□ -0.99
HMGCLL1-209ENST00000515546 MEIG1Q5JSS6 88 aa8.87□□□□□ -0.99
HMGCLL1-209ENST00000515546 LINC00518Q8N0U6 118 aa8.87□□□□□ -0.99
HMGCLL1-209ENST00000515546 DLEU1O43261 78 aa8.86□□□□□ -0.99
HMGCLL1-209ENST00000515546 RPL13AP40429 203 aaKnown RBP8.85□□□□□ -0.99
HMGCLL1-209ENST00000515546 RPL24P83731 157 aaKnown RBP8.85□□□□□ -0.99
HMGCLL1-209ENST00000515546 ADAMTSL4-AS1Q5T5F5 129 aa8.85□□□□□ -0.99
HMGCLL1-209ENST00000515546 DAND5Q8N907 189 aa8.85□□□□□ -0.99
HMGCLL1-209ENST00000515546 IGKV2-28A0A075B6P5 120 aa8.84□□□□□ -0.99
HMGCLL1-209ENST00000515546 IGKV2D-28P01615 120 aa8.84□□□□□ -0.99
HMGCLL1-209ENST00000515546 LINC00158P58513 81 aa8.84□□□□□ -0.99
HMGCLL1-209ENST00000515546 SLC25A34Q6PIV7 304 aa8.84□□□□□ -0.99
HMGCLL1-209ENST00000515546 SCGB1D4Q6XE38 83 aa8.84□□□□□ -0.99
HMGCLL1-209ENST00000515546 PRO1933Q9H354 126 aa8.84□□□□□ -0.99
HMGCLL1-209ENST00000515546 TIMM17BO60830 172 aa8.83□□□□□ -1
HMGCLL1-209ENST00000515546 C2orf91Q6ZV80 131 aa8.83□□□□□ -1
HMGCLL1-209ENST00000515546 MIR7-3HGQ8N6C7 128 aa8.83□□□□□ -1
HMGCLL1-209ENST00000515546 LINC00587B1AMM8 73 aa8.81□□□□□ -1
HMGCLL1-209ENST00000515546 EIF4EBP3O60516 100 aaPredicted RBP8.81□□□□□ -1
HMGCLL1-209ENST00000515546 TMEM126AQ9H061 195 aa8.81□□□□□ -1
HMGCLL1-209ENST00000515546 TMEM238C9JI98 176 aa8.8□□□□□ -1
HMGCLL1-209ENST00000515546 M0R378 163 aa8.8□□□□□ -1
HMGCLL1-209ENST00000515546 UBE2AP49459 152 aa8.8□□□□□ -1
HMGCLL1-209ENST00000515546 SOSTDC1Q6X4U4 206 aa8.8□□□□□ -1
HMGCLL1-209ENST00000515546 UQCR10Q9UDW1 63 aa8.8□□□□□ -1
HMGCLL1-209ENST00000515546 A0A087X002 238 aa8.79□□□□□ -1
HMGCLL1-209ENST00000515546 NPC2P61916 151 aa8.79□□□□□ -1
HMGCLL1-209ENST00000515546 SPANXDQ9BXN6 97 aa8.79□□□□□ -1
HMGCLL1-209ENST00000515546 SPANXCQ9NY87 97 aa8.79□□□□□ -1
HMGCLL1-209ENST00000515546 HIGD1BQ9P298 99 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms