RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 PANO1I0J062 215 aa7.6□□□□□ -1.19
PDLIM5-220ENST00000514830 GAGE2EQ4V326 116 aa7.6□□□□□ -1.19
PDLIM5-220ENST00000514830 C14orf144Q96I85 54 aa7.6□□□□□ -1.19
PDLIM5-220ENST00000514830 PLAC8Q9NZF1 115 aa7.6□□□□□ -1.19
PDLIM5-220ENST00000514830 GAGE2DQ9UEU5 116 aa7.6□□□□□ -1.19
PDLIM5-220ENST00000514830 IGLV5-37A0A075B6J1 123 aa7.59□□□□□ -1.19
PDLIM5-220ENST00000514830 IGKV2-24A0A0C4DH68 120 aa7.59□□□□□ -1.19
PDLIM5-220ENST00000514830 CDK2AP2O75956 126 aa7.59□□□□□ -1.19
PDLIM5-220ENST00000514830 CHTF8P0CG12 524 aa7.59□□□□□ -1.19
PDLIM5-220ENST00000514830 COPS9Q8WXC6 57 aa7.59□□□□□ -1.19
PDLIM5-220ENST00000514830 FAM30AQ9NZY2 134 aa7.59□□□□□ -1.19
PDLIM5-220ENST00000514830 LRP1BQ9NZR2 4599 aa7.58□□□□□ -1.2
PDLIM5-220ENST00000514830 IFITM1P13164 125 aa7.58□□□□□ -1.2
PDLIM5-220ENST00000514830 LINC00518Q8N0U6 118 aa7.58□□□□□ -1.2
PDLIM5-220ENST00000514830 C12orf57Q99622 126 aa7.58□□□□□ -1.2
PDLIM5-220ENST00000514830 XAGE1AQ9HD64 81 aa7.58□□□□□ -1.2
PDLIM5-220ENST00000514830 A0A087WYN8 130 aa7.57□□□□□ -1.2
PDLIM5-220ENST00000514830 A0A0U1RRA0 63 aa7.57□□□□□ -1.2
PDLIM5-220ENST00000514830 C2orf91Q6ZV80 131 aa7.57□□□□□ -1.2
PDLIM5-220ENST00000514830 LINC00308Q8TCZ7 52 aa7.57□□□□□ -1.2
PDLIM5-220ENST00000514830 UQCR10Q9UDW1 63 aa7.57□□□□□ -1.2
PDLIM5-220ENST00000514830 NDUFC2O95298 119 aa7.56□□□□□ -1.2
PDLIM5-220ENST00000514830 KRTAP7-1Q8IUC3 87 aa7.56□□□□□ -1.2
PDLIM5-220ENST00000514830 DAND5Q8N907 189 aa7.56□□□□□ -1.2
PDLIM5-220ENST00000514830 TP73-AS1Q9UF72 201 aa7.56□□□□□ -1.2
PDLIM5-220ENST00000514830 A0A1W2PNN7 141 aa7.55□□□□□ -1.2
PDLIM5-220ENST00000514830 VPREB1P12018 145 aa7.55□□□□□ -1.2
PDLIM5-220ENST00000514830 XGP55808 180 aa7.55□□□□□ -1.2
PDLIM5-220ENST00000514830 RPL24P83731 157 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-220ENST00000514830 TAL2Q16559 108 aa7.55□□□□□ -1.2
PDLIM5-220ENST00000514830 LCE2AQ5TA79 106 aaPredicted RBP7.55□□□□□ -1.2
PDLIM5-220ENST00000514830 SOSTDC1Q6X4U4 206 aa7.55□□□□□ -1.2
PDLIM5-220ENST00000514830 SCXQ7RTU7 201 aa7.55□□□□□ -1.2
PDLIM5-220ENST00000514830 CIRBP-AS1Q8TBR5 109 aa7.55□□□□□ -1.2
PDLIM5-220ENST00000514830 MIEN1Q9BRT3 115 aa7.55□□□□□ -1.2
PDLIM5-220ENST00000514830 SERTAD4-AS1Q5TG53 156 aa7.54□□□□□ -1.2
PDLIM5-220ENST00000514830 TRBV10-2A0A0K0K1G8 114 aa7.53□□□□□ -1.2
PDLIM5-220ENST00000514830 FAM168BA1KXE4 195 aa7.53□□□□□ -1.2
PDLIM5-220ENST00000514830 EIF4EBP3O60516 100 aaPredicted RBP7.53□□□□□ -1.2
PDLIM5-220ENST00000514830 SRSF9Q13242 221 aaKnown RBP eCLIP7.53□□□□□ -1.2
PDLIM5-220ENST00000514830 DPH3Q96FX2 82 aa7.53□□□□□ -1.2
PDLIM5-220ENST00000514830 Q8N1X5 172 aa7.52□□□□□ -1.21
PDLIM5-220ENST00000514830 Q8NDZ9 215 aa7.52□□□□□ -1.21
PDLIM5-220ENST00000514830 KRTAP4-5Q9BYR2 181 aa7.52□□□□□ -1.21
PDLIM5-220ENST00000514830 APOBP04114 4563 aaKnown RBP7.51□□□□□ -1.21
PDLIM5-220ENST00000514830 TSTD3H0UI37 97 aa7.51□□□□□ -1.21
PDLIM5-220ENST00000514830 FAM19A5Q7Z5A7 132 aaPredicted RBP7.51□□□□□ -1.21
PDLIM5-220ENST00000514830 MUSTN1Q8IVN3 82 aa7.51□□□□□ -1.21
PDLIM5-220ENST00000514830 HIST1H4GQ99525 98 aa7.51□□□□□ -1.21
PDLIM5-220ENST00000514830 C22orf24Q9Y442 160 aa7.51□□□□□ -1.21
PDLIM5-220ENST00000514830 M0QXV9 152 aa7.5□□□□□ -1.21
PDLIM5-220ENST00000514830 M0R378 163 aa7.5□□□□□ -1.21
PDLIM5-220ENST00000514830 LBHQ53QV2 105 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-220ENST00000514830 MRPL55Q7Z7F7 128 aaKnown RBP7.5□□□□□ -1.21
PDLIM5-220ENST00000514830 NKAPP1Q8N9T2 125 aa7.5□□□□□ -1.21
PDLIM5-220ENST00000514830 PRO1933Q9H354 126 aa7.5□□□□□ -1.21
PDLIM5-220ENST00000514830 ABCA13Q86UQ4 5058 aa7.49□□□□□ -1.21
PDLIM5-220ENST00000514830 SMCPP49901 116 aaPredicted RBP7.49□□□□□ -1.21
PDLIM5-220ENST00000514830 NPC2P61916 151 aa7.49□□□□□ -1.21
PDLIM5-220ENST00000514830 HSD52Q0P140 79 aa7.49□□□□□ -1.21
PDLIM5-220ENST00000514830 HNRNPA3P51991 378 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-220ENST00000514830 CEND1Q8N111 149 aa7.48□□□□□ -1.21
PDLIM5-220ENST00000514830 C7orf33Q8WU49 177 aa7.48□□□□□ -1.21
PDLIM5-220ENST00000514830 IGKV2-28A0A075B6P5 120 aa7.47□□□□□ -1.21
PDLIM5-220ENST00000514830 IGKV2D-28P01615 120 aa7.47□□□□□ -1.21
PDLIM5-220ENST00000514830 PHF5AQ7RTV0 110 aaKnown RBP7.47□□□□□ -1.21
PDLIM5-220ENST00000514830 LINC00167Q96N53 147 aa7.47□□□□□ -1.21
PDLIM5-220ENST00000514830 DMBT1Q9UGM3 2413 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-220ENST00000514830 IGLV1-50A0A075B6I6 118 aa7.46□□□□□ -1.22
PDLIM5-220ENST00000514830 A4D1N5 150 aa7.46□□□□□ -1.22
PDLIM5-220ENST00000514830 IGLV6-57P01721 117 aa7.46□□□□□ -1.22
PDLIM5-220ENST00000514830 PRR3P79522 188 aaKnown RBP7.46□□□□□ -1.22
PDLIM5-220ENST00000514830 TMEM238LA0A1B0GVL6 79 aa7.45□□□□□ -1.22
PDLIM5-220ENST00000514830 A6NJY4 79 aa7.45□□□□□ -1.22
PDLIM5-220ENST00000514830 NCR3O14931 201 aa7.45□□□□□ -1.22
PDLIM5-220ENST00000514830 TRAV13-2A0A0B4J235 113 aa7.44□□□□□ -1.22
PDLIM5-220ENST00000514830 HAMPP81172 84 aa7.44□□□□□ -1.22
PDLIM5-220ENST00000514830 LINC00337Q8N6G1 96 aa7.44□□□□□ -1.22
PDLIM5-220ENST00000514830 TMEM126AQ9H061 195 aa7.44□□□□□ -1.22
PDLIM5-220ENST00000514830 KCNQ1DNQ9H478 68 aa7.44□□□□□ -1.22
PDLIM5-220ENST00000514830 CBY1Q9Y3M2 126 aa7.44□□□□□ -1.22
PDLIM5-220ENST00000514830 DDTP30046 118 aa7.43□□□□□ -1.22
PDLIM5-220ENST00000514830 A0A0B4J2C4 111 aa7.42□□□□□ -1.22
PDLIM5-220ENST00000514830 TRBV10-3A0A0K0K1G6 114 aa7.42□□□□□ -1.22
PDLIM5-220ENST00000514830 PRYO14603 147 aa7.42□□□□□ -1.22
PDLIM5-220ENST00000514830 INAFM2P0DMQ5 153 aa7.42□□□□□ -1.22
PDLIM5-220ENST00000514830 FXYD2P54710 66 aa7.42□□□□□ -1.22
PDLIM5-220ENST00000514830 UBE2BP63146 152 aa7.42□□□□□ -1.22
PDLIM5-220ENST00000514830 KRTAP11-1Q8IUC1 163 aa7.42□□□□□ -1.22
PDLIM5-220ENST00000514830 LINC00528Q8N1L1 170 aa7.42□□□□□ -1.22
PDLIM5-220ENST00000514830 HSPG2P98160 4391 aa7.41□□□□□ -1.22
PDLIM5-220ENST00000514830 A0A1B0GWB2 263 aa7.41□□□□□ -1.22
PDLIM5-220ENST00000514830 GAGE10A6NGK3 116 aa7.41□□□□□ -1.22
PDLIM5-220ENST00000514830 RPL37AP8A6NKH3 93 aa7.41□□□□□ -1.22
PDLIM5-220ENST00000514830 CFC1BP0CG36 223 aa7.41□□□□□ -1.22
PDLIM5-220ENST00000514830 CFC1P0CG37 223 aa7.41□□□□□ -1.22
PDLIM5-220ENST00000514830 SPRR1AP35321 89 aa7.41□□□□□ -1.22
PDLIM5-220ENST00000514830 CTAG1AP78358 180 aa7.41□□□□□ -1.22
PDLIM5-220ENST00000514830 S100A7L2Q5SY68 101 aa7.41□□□□□ -1.22
PDLIM5-220ENST00000514830 PSORS1C2Q9UIG4 136 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms