RNA–Protein interactions for RNA: ENST00000514168.1

SMAD1-212, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-212ENST00000514168 SMIM13P0DJ93 91 aa7.57□□□□□ -1.2
SMAD1-212ENST00000514168 CHTF8P0CG12 524 aa7.56□□□□□ -1.2
SMAD1-212ENST00000514168 COX8AP10176 69 aa7.56□□□□□ -1.2
SMAD1-212ENST00000514168 HAMPP81172 84 aa7.56□□□□□ -1.2
SMAD1-212ENST00000514168 SCGB1D4Q6XE38 83 aa7.56□□□□□ -1.2
SMAD1-212ENST00000514168 Q6ZSA8 131 aa7.56□□□□□ -1.2
SMAD1-212ENST00000514168 DPH3Q96FX2 82 aa7.56□□□□□ -1.2
SMAD1-212ENST00000514168 TIMM17BO60830 172 aa7.55□□□□□ -1.2
SMAD1-212ENST00000514168 SPACA4Q8TDM5 124 aa7.55□□□□□ -1.2
SMAD1-212ENST00000514168 FAM30AQ9NZY2 134 aa7.55□□□□□ -1.2
SMAD1-212ENST00000514168 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.55□□□□□ -1.2
SMAD1-212ENST00000514168 HMCN2Q8NDA2 5059 aa7.55□□□□□ -1.2
SMAD1-212ENST00000514168 PANO1I0J062 215 aa7.54□□□□□ -1.2
SMAD1-212ENST00000514168 DLEU1O43261 78 aa7.54□□□□□ -1.2
SMAD1-212ENST00000514168 BOD1L2Q8IYS8 172 aa7.54□□□□□ -1.2
SMAD1-212ENST00000514168 MIR7-3HGQ8N6C7 128 aa7.54□□□□□ -1.2
SMAD1-212ENST00000514168 C14orf144Q96I85 54 aa7.54□□□□□ -1.2
SMAD1-212ENST00000514168 SND1-IT1Q9HBX3 110 aa7.54□□□□□ -1.2
SMAD1-212ENST00000514168 XAGE1AQ9HD64 81 aa7.54□□□□□ -1.2
SMAD1-212ENST00000514168 C9orf129Q5T035 196 aaKnown RBP7.53□□□□□ -1.2
SMAD1-212ENST00000514168 PRO1933Q9H354 126 aa7.53□□□□□ -1.2
SMAD1-212ENST00000514168 LRP1Q07954 4544 aaKnown RBP7.53□□□□□ -1.2
SMAD1-212ENST00000514168 TMEM238C9JI98 176 aa7.52□□□□□ -1.21
SMAD1-212ENST00000514168 SLC25A34Q6PIV7 304 aa7.52□□□□□ -1.21
SMAD1-212ENST00000514168 LITAFQ99732 161 aa7.52□□□□□ -1.21
SMAD1-212ENST00000514168 MIEN1Q9BRT3 115 aa7.52□□□□□ -1.21
SMAD1-212ENST00000514168 A0A087WYN8 130 aa7.51□□□□□ -1.21
SMAD1-212ENST00000514168 ADAMTSL4-AS1Q5T5F5 129 aa7.51□□□□□ -1.21
SMAD1-212ENST00000514168 DAND5Q8N907 189 aa7.51□□□□□ -1.21
SMAD1-212ENST00000514168 SCXQ7RTU7 201 aa7.5□□□□□ -1.21
SMAD1-212ENST00000514168 CIRBP-AS1Q8TBR5 109 aa7.5□□□□□ -1.21
SMAD1-212ENST00000514168 PLAC8Q9NZF1 115 aa7.5□□□□□ -1.21
SMAD1-212ENST00000514168 PLA2G2DQ9UNK4 145 aa7.5□□□□□ -1.21
SMAD1-212ENST00000514168 FAT3Q8TDW7 4589 aa7.49□□□□□ -1.21
SMAD1-212ENST00000514168 UBR4Q5T4S7 5183 aa7.49□□□□□ -1.21
SMAD1-212ENST00000514168 LOC107984156A0A0G2JMH3 177 aa7.49□□□□□ -1.21
SMAD1-212ENST00000514168 A0A1W2PNN7 141 aa7.49□□□□□ -1.21
SMAD1-212ENST00000514168 KRTAP29-1A8MX34 341 aaPredicted RBP7.49□□□□□ -1.21
SMAD1-212ENST00000514168 FAM229AH3BQW9 127 aa7.49□□□□□ -1.21
SMAD1-212ENST00000514168 Q6ZVH6 145 aa7.49□□□□□ -1.21
SMAD1-212ENST00000514168 ARL17AQ8IVW1 177 aa7.49□□□□□ -1.21
SMAD1-212ENST00000514168 SPANXDQ9BXN6 97 aa7.49□□□□□ -1.21
SMAD1-212ENST00000514168 SPANXB1Q9NS25 103 aaPredicted RBP7.49□□□□□ -1.21
SMAD1-212ENST00000514168 SPANXCQ9NY87 97 aa7.49□□□□□ -1.21
SMAD1-212ENST00000514168 TP73-AS1Q9UF72 201 aa7.49□□□□□ -1.21
SMAD1-212ENST00000514168 FAM168BA1KXE4 195 aa7.48□□□□□ -1.21
SMAD1-212ENST00000514168 NPC2P61916 151 aa7.48□□□□□ -1.21
SMAD1-212ENST00000514168 RPL24P83731 157 aaKnown RBP7.48□□□□□ -1.21
SMAD1-212ENST00000514168 FAM19A5Q7Z5A7 132 aaPredicted RBP7.48□□□□□ -1.21
SMAD1-212ENST00000514168 LINC00308Q8TCZ7 52 aa7.48□□□□□ -1.21
SMAD1-212ENST00000514168 UQCR10Q9UDW1 63 aa7.48□□□□□ -1.21
SMAD1-212ENST00000514168 M0R143 59 aa7.47□□□□□ -1.21
SMAD1-212ENST00000514168 IFITM1P13164 125 aa7.47□□□□□ -1.21
SMAD1-212ENST00000514168 SRSF9Q13242 221 aaKnown RBP eCLIP7.47□□□□□ -1.21
SMAD1-212ENST00000514168 SERTAD4-AS1Q5TG53 156 aa7.47□□□□□ -1.21
SMAD1-212ENST00000514168 COPS9Q8WXC6 57 aa7.47□□□□□ -1.21
SMAD1-212ENST00000514168 HIGD1BQ9P298 99 aa7.47□□□□□ -1.21
SMAD1-212ENST00000514168 J3QL48 77 aa7.46□□□□□ -1.22
SMAD1-212ENST00000514168 VPREB1P12018 145 aa7.46□□□□□ -1.22
SMAD1-212ENST00000514168 SOSTDC1Q6X4U4 206 aa7.46□□□□□ -1.22
SMAD1-212ENST00000514168 KRTAP7-1Q8IUC3 87 aa7.46□□□□□ -1.22
SMAD1-212ENST00000514168 IGLV5-37A0A075B6J1 123 aa7.45□□□□□ -1.22
SMAD1-212ENST00000514168 M0QXV9 152 aa7.45□□□□□ -1.22
SMAD1-212ENST00000514168 KRTAP10-4P60372 401 aaPredicted RBP7.45□□□□□ -1.22
SMAD1-212ENST00000514168 C2orf91Q6ZV80 131 aa7.45□□□□□ -1.22
SMAD1-212ENST00000514168 NKAPP1Q8N9T2 125 aa7.45□□□□□ -1.22
SMAD1-212ENST00000514168 PPDPFQ9H3Y8 114 aa7.45□□□□□ -1.22
SMAD1-212ENST00000514168 C22orf24Q9Y442 160 aa7.45□□□□□ -1.22
SMAD1-212ENST00000514168 PKHD1L1Q86WI1 4243 aa7.44□□□□□ -1.22
SMAD1-212ENST00000514168 EIF4EBP3O60516 100 aaPredicted RBP7.44□□□□□ -1.22
SMAD1-212ENST00000514168 NDUFC2O95298 119 aa7.44□□□□□ -1.22
SMAD1-212ENST00000514168 MUSTN1Q8IVN3 82 aa7.44□□□□□ -1.22
SMAD1-212ENST00000514168 Q8NDZ9 215 aa7.44□□□□□ -1.22
SMAD1-212ENST00000514168 HIST1H4GQ99525 98 aa7.44□□□□□ -1.22
SMAD1-212ENST00000514168 PHF5AQ7RTV0 110 aaKnown RBP7.43□□□□□ -1.22
SMAD1-212ENST00000514168 MRPL55Q7Z7F7 128 aaKnown RBP7.43□□□□□ -1.22
SMAD1-212ENST00000514168 M0R378 163 aa7.42□□□□□ -1.22
SMAD1-212ENST00000514168 PRR3P79522 188 aaKnown RBP7.42□□□□□ -1.22
SMAD1-212ENST00000514168 TAL2Q16559 108 aa7.42□□□□□ -1.22
SMAD1-212ENST00000514168 C7orf33Q8WU49 177 aa7.42□□□□□ -1.22
SMAD1-212ENST00000514168 SNHG12Q9BXW3 62 aa7.42□□□□□ -1.22
SMAD1-212ENST00000514168 TRBV10-2A0A0K0K1G8 114 aa7.41□□□□□ -1.22
SMAD1-212ENST00000514168 NCR3O14931 201 aa7.41□□□□□ -1.22
SMAD1-212ENST00000514168 HNRNPA3P51991 378 aaKnown RBP7.41□□□□□ -1.22
SMAD1-212ENST00000514168 UBE2BP63146 152 aa7.41□□□□□ -1.22
SMAD1-212ENST00000514168 LINC00167Q96N53 147 aa7.41□□□□□ -1.22
SMAD1-212ENST00000514168 GAGE10A6NGK3 116 aa7.4□□□□□ -1.22
SMAD1-212ENST00000514168 LINC00528Q8N1L1 170 aa7.4□□□□□ -1.22
SMAD1-212ENST00000514168 PLA2G1BP04054 148 aaKnown RBP7.39□□□□□ -1.23
SMAD1-212ENST00000514168 A4D1N5 150 aa7.38□□□□□ -1.23
SMAD1-212ENST00000514168 RPL37AP8A6NKH3 93 aa7.38□□□□□ -1.23
SMAD1-212ENST00000514168 HSD52Q0P140 79 aa7.38□□□□□ -1.23
SMAD1-212ENST00000514168 COL5A1-AS1Q5SY13 56 aa7.38□□□□□ -1.23
SMAD1-212ENST00000514168 CEND1Q8N111 149 aa7.38□□□□□ -1.23
SMAD1-212ENST00000514168 IGLV1-50A0A075B6I6 118 aa7.37□□□□□ -1.23
SMAD1-212ENST00000514168 IGKV2-28A0A075B6P5 120 aa7.37□□□□□ -1.23
SMAD1-212ENST00000514168 IGKV2D-28P01615 120 aa7.37□□□□□ -1.23
SMAD1-212ENST00000514168 S100A7L2Q5SY68 101 aa7.37□□□□□ -1.23
SMAD1-212ENST00000514168 KRTAP11-1Q8IUC1 163 aa7.36□□□□□ -1.23
SMAD1-212ENST00000514168 OR13C6PQ8NH95 151 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms