RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 PAM16Q9Y3D7 125 aa7.1□□□□□ -1.27
HTT-213ENST00000513806 HSBP1L1C9JCN9 74 aa7.09□□□□□ -1.27
HTT-213ENST00000513806 EIF4EBP3O60516 100 aaPredicted RBP7.09□□□□□ -1.27
HTT-213ENST00000513806 COX17Q14061 63 aa7.09□□□□□ -1.27
HTT-213ENST00000513806 SFTA2Q6UW10 78 aa7.09□□□□□ -1.27
HTT-213ENST00000513806 KRTAP11-1Q8IUC1 163 aa7.09□□□□□ -1.27
HTT-213ENST00000513806 HERC2O95714 4834 aa7.09□□□□□ -1.27
HTT-213ENST00000513806 M0QXV9 152 aa7.08□□□□□ -1.28
HTT-213ENST00000513806 LITAFQ99732 161 aa7.08□□□□□ -1.28
HTT-213ENST00000513806 PKHD1L1Q86WI1 4243 aa7.08□□□□□ -1.28
HTT-213ENST00000513806 GAGE10A6NGK3 116 aa7.07□□□□□ -1.28
HTT-213ENST00000513806 EPM2AB3EWF7 344 aa7.07□□□□□ -1.28
HTT-213ENST00000513806 PRR3P79522 188 aaKnown RBP7.07□□□□□ -1.28
HTT-213ENST00000513806 SPATA45Q537H7 98 aa7.07□□□□□ -1.28
HTT-213ENST00000513806 Q5VSD8 79 aa7.07□□□□□ -1.28
HTT-213ENST00000513806 SOSTDC1Q6X4U4 206 aa7.07□□□□□ -1.28
HTT-213ENST00000513806 C22orf24Q9Y442 160 aa7.07□□□□□ -1.28
HTT-213ENST00000513806 VPREB1P12018 145 aa7.06□□□□□ -1.28
HTT-213ENST00000513806 SCGB1D4Q6XE38 83 aa7.06□□□□□ -1.28
HTT-213ENST00000513806 Q8N1X5 172 aa7.06□□□□□ -1.28
HTT-213ENST00000513806 C14orf144Q96I85 54 aa7.06□□□□□ -1.28
HTT-213ENST00000513806 VAMP8Q9BV40 100 aa7.06□□□□□ -1.28
HTT-213ENST00000513806 LOC105371267A0A1B0GV96 52 aa7.05□□□□□ -1.28
HTT-213ENST00000513806 RPL37AP8A6NKH3 93 aa7.04□□□□□ -1.28
HTT-213ENST00000513806 NCR3O14931 201 aa7.04□□□□□ -1.28
HTT-213ENST00000513806 RPL37AP61513 92 aaKnown RBP7.04□□□□□ -1.28
HTT-213ENST00000513806 BOD1L2Q8IYS8 172 aa7.04□□□□□ -1.28
HTT-213ENST00000513806 LINC00587B1AMM8 73 aa7.03□□□□□ -1.28
HTT-213ENST00000513806 KRTAP10-4P60372 401 aaPredicted RBP7.03□□□□□ -1.28
HTT-213ENST00000513806 NKAPP1Q8N9T2 125 aa7.03□□□□□ -1.28
HTT-213ENST00000513806 C7orf33Q8WU49 177 aa7.03□□□□□ -1.28
HTT-213ENST00000513806 LINC00167Q96N53 147 aa7.03□□□□□ -1.28
HTT-213ENST00000513806 PLA2G2DQ9UNK4 145 aa7.03□□□□□ -1.28
HTT-213ENST00000513806 SRRM2Q9UQ35 2752 aaKnown RBP7.02□□□□□ -1.29
HTT-213ENST00000513806 FAM229AH3BQW9 127 aa7.02□□□□□ -1.29
HTT-213ENST00000513806 COX8AP10176 69 aa7.02□□□□□ -1.29
HTT-213ENST00000513806 HNRNPA3P51991 378 aaKnown RBP7.02□□□□□ -1.29
HTT-213ENST00000513806 UBE2BP63146 152 aa7.02□□□□□ -1.29
HTT-213ENST00000513806 MRPL55Q7Z7F7 128 aaKnown RBP7.02□□□□□ -1.29
HTT-213ENST00000513806 PSORS1C2Q9UIG4 136 aa7.02□□□□□ -1.29
HTT-213ENST00000513806 IGLV5-37A0A075B6J1 123 aa7.01□□□□□ -1.29
HTT-213ENST00000513806 IGKV2-28A0A075B6P5 120 aa7.01□□□□□ -1.29
HTT-213ENST00000513806 TIMM17BO60830 172 aa7.01□□□□□ -1.29
HTT-213ENST00000513806 IGKV2D-28P01615 120 aa7.01□□□□□ -1.29
HTT-213ENST00000513806 LINC00308Q8TCZ7 52 aa7.01□□□□□ -1.29
HTT-213ENST00000513806 MIEN1Q9BRT3 115 aa7□□□□□ -1.29
HTT-213ENST00000513806 SPANXDQ9BXN6 97 aa7□□□□□ -1.29
HTT-213ENST00000513806 SPANXCQ9NY87 97 aa7□□□□□ -1.29
HTT-213ENST00000513806 TMEM238C9JI98 176 aa6.99□□□□□ -1.29
HTT-213ENST00000513806 RPL24P83731 157 aaKnown RBP6.99□□□□□ -1.29
HTT-213ENST00000513806 C1orf137Q5JT78 98 aa6.99□□□□□ -1.29
HTT-213ENST00000513806 MUSTN1Q8IVN3 82 aa6.99□□□□□ -1.29
HTT-213ENST00000513806 LOC107984156A0A0G2JMH3 177 aa6.98□□□□□ -1.29
HTT-213ENST00000513806 LBHQ53QV2 105 aaPredicted RBP6.98□□□□□ -1.29
HTT-213ENST00000513806 C2orf91Q6ZV80 131 aa6.98□□□□□ -1.29
HTT-213ENST00000513806 ARL17AQ8IVW1 177 aa6.98□□□□□ -1.29
HTT-213ENST00000513806 PLA2G1BP04054 148 aaKnown RBP6.97□□□□□ -1.29
HTT-213ENST00000513806 SLC25A34Q6PIV7 304 aa6.97□□□□□ -1.29
HTT-213ENST00000513806 PRO1933Q9H354 126 aa6.97□□□□□ -1.29
HTT-213ENST00000513806 IGLV1-50A0A075B6I6 118 aa6.96□□□□□ -1.3
HTT-213ENST00000513806 TRBV10-3A0A0K0K1G6 114 aa6.96□□□□□ -1.3
HTT-213ENST00000513806 M0R378 163 aa6.96□□□□□ -1.3
HTT-213ENST00000513806 DLEU1O43261 78 aa6.96□□□□□ -1.3
HTT-213ENST00000513806 SRSF9Q13242 221 aaKnown RBP eCLIP6.96□□□□□ -1.3
HTT-213ENST00000513806 SPANXB1Q9NS25 103 aaPredicted RBP6.95□□□□□ -1.3
HTT-213ENST00000513806 FLG2Q5D862 2391 aaPredicted RBP6.95□□□□□ -1.3
HTT-213ENST00000513806 ABCA13Q86UQ4 5058 aa6.94□□□□□ -1.3
HTT-213ENST00000513806 NDUFC2O95298 119 aa6.94□□□□□ -1.3
HTT-213ENST00000513806 S100A12P80511 92 aa6.94□□□□□ -1.3
HTT-213ENST00000513806 HIST1H4GQ99525 98 aa6.94□□□□□ -1.3
HTT-213ENST00000513806 SMIM6P0DI80 62 aa6.93□□□□□ -1.3
HTT-213ENST00000513806 INAFM2P0DMQ5 153 aa6.93□□□□□ -1.3
HTT-213ENST00000513806 DDTP30046 118 aa6.93□□□□□ -1.3
HTT-213ENST00000513806 LINC00337Q8N6G1 96 aa6.93□□□□□ -1.3
HTT-213ENST00000513806 C12orf57Q99622 126 aa6.93□□□□□ -1.3
HTT-213ENST00000513806 IGLV7-43P04211 117 aa6.92□□□□□ -1.3
HTT-213ENST00000513806 IFITM1P13164 125 aa6.92□□□□□ -1.3
HTT-213ENST00000513806 OR13C6PQ8NH95 151 aa6.92□□□□□ -1.3
HTT-213ENST00000513806 TMEM126AQ9H061 195 aa6.92□□□□□ -1.3
HTT-213ENST00000513806 TRBV10-2A0A0K0K1G8 114 aa6.91□□□□□ -1.3
HTT-213ENST00000513806 A4D1N5 150 aa6.91□□□□□ -1.3
HTT-213ENST00000513806 PRLHP81277 87 aa6.91□□□□□ -1.3
HTT-213ENST00000513806 S100A7L2Q5SY68 101 aa6.91□□□□□ -1.3
HTT-213ENST00000513806 REG3GQ6UW15 175 aa6.91□□□□□ -1.3
HTT-213ENST00000513806 Q6ZVH6 145 aa6.91□□□□□ -1.3
HTT-213ENST00000513806 HIGD1BQ9P298 99 aa6.91□□□□□ -1.3
HTT-213ENST00000513806 BCE1O60756 84 aa6.9□□□□□ -1.3
HTT-213ENST00000513806 IGLV6-57P01721 117 aa6.9□□□□□ -1.3
HTT-213ENST00000513806 FAM19A1Q7Z5A9 133 aa6.9□□□□□ -1.3
HTT-213ENST00000513806 PRYO14603 147 aa6.89□□□□□ -1.31
HTT-213ENST00000513806 UQCR10Q9UDW1 63 aa6.89□□□□□ -1.31
HTT-213ENST00000513806 FAT3Q8TDW7 4589 aa6.89□□□□□ -1.31
HTT-213ENST00000513806 LRP1Q07954 4544 aaKnown RBP6.89□□□□□ -1.31
HTT-213ENST00000513806 TRAV23DV6A0A075B6W5 121 aa6.88□□□□□ -1.31
HTT-213ENST00000513806 A6NDN8 102 aa6.88□□□□□ -1.31
HTT-213ENST00000513806 UBE2AP49459 152 aa6.88□□□□□ -1.31
HTT-213ENST00000513806 KCNQ1DNQ9H478 68 aa6.88□□□□□ -1.31
HTT-213ENST00000513806 FXYD2P54710 66 aa6.87□□□□□ -1.31
HTT-213ENST00000513806 KRTAP13-1Q8IUC0 172 aa6.87□□□□□ -1.31
HTT-213ENST00000513806 CEND1Q8N111 149 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms