RNA–Protein interactions for RNA: ENST00000513448.5

PROM1-215, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-215ENST00000513448 C6orf223Q8N319 242 aa6.26□□□□□ -1.41
PROM1-215ENST00000513448 C3orf56Q8N813 242 aa6.26□□□□□ -1.41
PROM1-215ENST00000513448 ZNF561-AS1K7EIQ3 104 aa6.26□□□□□ -1.41
PROM1-215ENST00000513448 KRTAP24-1Q3LI83 254 aa6.26□□□□□ -1.41
PROM1-215ENST00000513448 Q6ZTC4 211 aa6.26□□□□□ -1.41
PROM1-215ENST00000513448 C2orf48Q96LS8 159 aa6.26□□□□□ -1.41
PROM1-215ENST00000513448 NHLRC4P0CG21 123 aaPredicted RBP6.25□□□□□ -1.41
PROM1-215ENST00000513448 C6orf99Q4VX62 202 aa6.25□□□□□ -1.41
PROM1-215ENST00000513448 LINC00575Q6W349 94 aa6.25□□□□□ -1.41
PROM1-215ENST00000513448 LINC01556Q5JQF7 62 aa6.25□□□□□ -1.41
PROM1-215ENST00000513448 KRTAP26-1Q6PEX3 210 aa6.25□□□□□ -1.41
PROM1-215ENST00000513448 WFDC10BQ8IUB3 73 aa6.25□□□□□ -1.41
PROM1-215ENST00000513448 SMCR5Q8TEV8 140 aa6.25□□□□□ -1.41
PROM1-215ENST00000513448 C14orf132Q9NPU4 83 aa6.25□□□□□ -1.41
PROM1-215ENST00000513448 C6orf48Q9UBA6 75 aa6.25□□□□□ -1.41
PROM1-215ENST00000513448 NCR3O14931 201 aa6.24□□□□□ -1.41
PROM1-215ENST00000513448 GHRHP01286 108 aa6.24□□□□□ -1.41
PROM1-215ENST00000513448 TRBV7-6A0A0J9YX20 115 aa6.23□□□□□ -1.41
PROM1-215ENST00000513448 SLPIP03973 132 aa6.23□□□□□ -1.41
PROM1-215ENST00000513448 CCKP06307 115 aa6.23□□□□□ -1.41
PROM1-215ENST00000513448 ESRGQ1W209 222 aa6.23□□□□□ -1.41
PROM1-215ENST00000513448 Q8NDZ9 215 aa6.23□□□□□ -1.41
PROM1-215ENST00000513448 C11orf45Q8TAV5 145 aa6.23□□□□□ -1.41
PROM1-215ENST00000513448 RETNQ9HD89 108 aa6.23□□□□□ -1.41
PROM1-215ENST00000513448 DEFB131BA0A096LNP1 70 aa6.23□□□□□ -1.41
PROM1-215ENST00000513448 hADV29S1A0JD25 119 aa6.23□□□□□ -1.41
PROM1-215ENST00000513448 C9orf129Q5T035 196 aaKnown RBP6.23□□□□□ -1.41
PROM1-215ENST00000513448 CAMK2N2Q96S95 79 aa6.23□□□□□ -1.41
PROM1-215ENST00000513448 C1orf43Q9BWL3 253 aa6.22□□□□□ -1.41
PROM1-215ENST00000513448 RPL18AQ02543 176 aaKnown RBP6.21□□□□□ -1.41
PROM1-215ENST00000513448 LINC00526Q96FQ7 95 aa6.21□□□□□ -1.41
PROM1-215ENST00000513448 NDUFC2-KCTD14E9PQ53 114 aa6.21□□□□□ -1.42
PROM1-215ENST00000513448 LCE2BO14633 110 aa6.21□□□□□ -1.42
PROM1-215ENST00000513448 Q6JHZ5 121 aa6.21□□□□□ -1.42
PROM1-215ENST00000513448 F8P00451 2351 aa6.2□□□□□ -1.42
PROM1-215ENST00000513448 TRAV23DV6A0A075B6W5 121 aa6.2□□□□□ -1.42
PROM1-215ENST00000513448 DNAH10OSP0CZ25 163 aa6.2□□□□□ -1.42
PROM1-215ENST00000513448 DIRC1Q969H9 104 aa6.2□□□□□ -1.42
PROM1-215ENST00000513448 CMYA5Q8N3K9 4069 aa6.2□□□□□ -1.42
PROM1-215ENST00000513448 M0R378 163 aa6.2□□□□□ -1.42
PROM1-215ENST00000513448 PDE6GP18545 87 aa6.2□□□□□ -1.42
PROM1-215ENST00000513448 C15orf56Q8N910 161 aa6.2□□□□□ -1.42
PROM1-215ENST00000513448 LINC00846Q9NV44 126 aa6.2□□□□□ -1.42
PROM1-215ENST00000513448 DNAH3Q8TD57 4116 aa6.19□□□□□ -1.42
PROM1-215ENST00000513448 ANK2Q01484 3957 aa6.19□□□□□ -1.42
PROM1-215ENST00000513448 TRBV10-3A0A0K0K1G6 114 aa6.19□□□□□ -1.42
PROM1-215ENST00000513448 FAM236AA0A1B0GUQ0 79 aa6.19□□□□□ -1.42
PROM1-215ENST00000513448 FAM236BA0A1B0GV22 79 aa6.19□□□□□ -1.42
PROM1-215ENST00000513448 TRAV10A0A0B4J240 114 aa6.18□□□□□ -1.42
PROM1-215ENST00000513448 ZNF73O43830 326 aaPredicted RBP6.18□□□□□ -1.42
PROM1-215ENST00000513448 VPREB1P12018 145 aa6.18□□□□□ -1.42
PROM1-215ENST00000513448 RBM3P98179 157 aaKnown RBP6.18□□□□□ -1.42
PROM1-215ENST00000513448 ATP5EP2Q5VTU8 51 aa6.18□□□□□ -1.42
PROM1-215ENST00000513448 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.18□□□□□ -1.42
PROM1-215ENST00000513448 Q6ZRU5 148 aa6.18□□□□□ -1.42
PROM1-215ENST00000513448 XAGE1AQ9HD64 81 aa6.18□□□□□ -1.42
PROM1-215ENST00000513448 LOC110117498A0A087WWA1 95 aa6.18□□□□□ -1.42
PROM1-215ENST00000513448 HIGD2BQ4VC39 106 aa6.18□□□□□ -1.42
PROM1-215ENST00000513448 IGKV2D-24A0A075B6R9 120 aa6.17□□□□□ -1.42
PROM1-215ENST00000513448 ELOF1P60002 83 aaKnown RBP6.17□□□□□ -1.42
PROM1-215ENST00000513448 COX7BP24311 80 aa6.16□□□□□ -1.42
PROM1-215ENST00000513448 HIST1H4AP62805 103 aaKnown RBP6.16□□□□□ -1.42
PROM1-215ENST00000513448 SYCNQ0VAF6 134 aa6.16□□□□□ -1.42
PROM1-215ENST00000513448 TM2D3Q9BRN9 247 aa6.16□□□□□ -1.42
PROM1-215ENST00000513448 CCDC179H3BU77 68 aa6.15□□□□□ -1.42
PROM1-215ENST00000513448 ATOX1O00244 68 aa6.15□□□□□ -1.42
PROM1-215ENST00000513448 TLX1NBP0CAT3 122 aa6.15□□□□□ -1.42
PROM1-215ENST00000513448 Q6ZQY7 126 aa6.15□□□□□ -1.42
PROM1-215ENST00000513448 LAMTOR3Q9UHA4 124 aa6.15□□□□□ -1.42
PROM1-215ENST00000513448 B5MCH6 92 aa6.15□□□□□ -1.43
PROM1-215ENST00000513448 Q6ZQT0 140 aa6.15□□□□□ -1.43
PROM1-215ENST00000513448 RMI2Q96E14 147 aa6.15□□□□□ -1.43
PROM1-215ENST00000513448 DSCR8Q96T75 97 aa6.15□□□□□ -1.43
PROM1-215ENST00000513448 UBL5Q9BZL1 73 aa6.15□□□□□ -1.43
PROM1-215ENST00000513448 PLA2G2DQ9UNK4 145 aa6.14□□□□□ -1.43
PROM1-215ENST00000513448 UQCRQO14949 82 aa6.13□□□□□ -1.43
PROM1-215ENST00000513448 Q6ZRP5 223 aa6.13□□□□□ -1.43
PROM1-215ENST00000513448 LINC00528Q8N1L1 170 aa6.12□□□□□ -1.43
PROM1-215ENST00000513448 MRAPQ8TCY5 172 aa6.12□□□□□ -1.43
PROM1-215ENST00000513448 UPK3BQ9BT76 320 aa6.12□□□□□ -1.43
PROM1-215ENST00000513448 LINC00588Q9Y4M8 146 aa6.12□□□□□ -1.43
PROM1-215ENST00000513448 C3orf22Q8N5N4 141 aa6.11□□□□□ -1.43
PROM1-215ENST00000513448 KCNQ1DNQ9H478 68 aa6.11□□□□□ -1.43
PROM1-215ENST00000513448 IGKV3D-7A0A0C4DH55 119 aa6.11□□□□□ -1.43
PROM1-215ENST00000513448 NKAPP1Q8N9T2 125 aa6.11□□□□□ -1.43
PROM1-215ENST00000513448 FBN1P35555 2871 aaKnown RBP6.1□□□□□ -1.43
PROM1-215ENST00000513448 IGLV5-37A0A075B6J1 123 aa6.1□□□□□ -1.43
PROM1-215ENST00000513448 COX7CP15954 63 aa6.1□□□□□ -1.43
PROM1-215ENST00000513448 STAB1Q9NY15 2570 aa6.09□□□□□ -1.43
PROM1-215ENST00000513448 TRBV7-4A0A0J9YYF1 115 aa6.09□□□□□ -1.43
PROM1-215ENST00000513448 PKD1L1Q8TDX9 2849 aa6.08□□□□□ -1.44
PROM1-215ENST00000513448 K7EIL1 84 aa6.08□□□□□ -1.44
PROM1-215ENST00000513448 MAST4O15021 2626 aa6.08□□□□□ -1.44
PROM1-215ENST00000513448 USP17L23D6RBM5 183 aa6.08□□□□□ -1.44
PROM1-215ENST00000513448 TENM3Q9P273 2699 aa6.07□□□□□ -1.44
PROM1-215ENST00000513448 FLNBO75369 2602 aaKnown RBP6.07□□□□□ -1.44
PROM1-215ENST00000513448 BCE1O60756 84 aa6.07□□□□□ -1.44
PROM1-215ENST00000513448 DNAH1Q9P2D7 4330 aa6.07□□□□□ -1.44
PROM1-215ENST00000513448 HUWE1Q7Z6Z7 4374 aaKnown RBP6.06□□□□□ -1.44
PROM1-215ENST00000513448 PRYO14603 147 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms