RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 PACRGQ96M98 296 aaPredicted RBP8.33□□□□□ -1.08
SPCS3-204ENST00000513139 H3BRM9 83 aa8.32□□□□□ -1.08
SPCS3-204ENST00000513139 C3orf79P0CE67 100 aa8.32□□□□□ -1.08
SPCS3-204ENST00000513139 RPL18AQ02543 176 aaKnown RBP8.32□□□□□ -1.08
SPCS3-204ENST00000513139 RNF151Q2KHN1 245 aa8.32□□□□□ -1.08
SPCS3-204ENST00000513139 C10orf25Q5T742 122 aa8.32□□□□□ -1.08
SPCS3-204ENST00000513139 C2orf82Q6UX34 121 aa8.32□□□□□ -1.08
SPCS3-204ENST00000513139 UNQ6190/PRO20217Q6UXQ8 127 aa8.32□□□□□ -1.08
SPCS3-204ENST00000513139 KRTDAPP60985 99 aa8.31□□□□□ -1.08
SPCS3-204ENST00000513139 HIST1H2BLQ99880 126 aa8.31□□□□□ -1.08
SPCS3-204ENST00000513139 C5orf52A6NGY3 159 aa8.3□□□□□ -1.08
SPCS3-204ENST00000513139 PRSS2P07478 247 aa8.3□□□□□ -1.08
SPCS3-204ENST00000513139 S100A2P29034 98 aa8.3□□□□□ -1.08
SPCS3-204ENST00000513139 C6orf226Q5I0X4 101 aa8.3□□□□□ -1.08
SPCS3-204ENST00000513139 IGLV5-39A0A0G2JS06 123 aa8.29□□□□□ -1.08
SPCS3-204ENST00000513139 TMEM223A0PJW6 202 aa8.29□□□□□ -1.08
SPCS3-204ENST00000513139 DPM2O94777 84 aa8.29□□□□□ -1.08
SPCS3-204ENST00000513139 PET117Q6UWS5 81 aa8.29□□□□□ -1.08
SPCS3-204ENST00000513139 KRTAP11-1Q8IUC1 163 aa8.29□□□□□ -1.08
SPCS3-204ENST00000513139 Q8IZM0 81 aa8.29□□□□□ -1.08
SPCS3-204ENST00000513139 COX7B2Q8TF08 81 aa8.29□□□□□ -1.08
SPCS3-204ENST00000513139 NDUFA1O15239 70 aa8.28□□□□□ -1.08
SPCS3-204ENST00000513139 IGKCP01834 107 aa8.28□□□□□ -1.08
SPCS3-204ENST00000513139 PLNP26678 52 aa8.28□□□□□ -1.08
SPCS3-204ENST00000513139 CKS1BP61024 79 aa8.28□□□□□ -1.08
SPCS3-204ENST00000513139 LINC01545Q5VT33 79 aa8.27□□□□□ -1.09
SPCS3-204ENST00000513139 C6orf48Q9UBA6 75 aa8.27□□□□□ -1.09
SPCS3-204ENST00000513139 F8WDY8 70 aa8.26□□□□□ -1.09
SPCS3-204ENST00000513139 TLX1NBP0CAT3 122 aa8.25□□□□□ -1.09
SPCS3-204ENST00000513139 FAM168BA1KXE4 195 aa8.24□□□□□ -1.09
SPCS3-204ENST00000513139 TSPAN13O95857 204 aa8.23□□□□□ -1.09
SPCS3-204ENST00000513139 TRBV30A0A0K0K1B3 111 aa8.22□□□□□ -1.09
SPCS3-204ENST00000513139 TSPEAR-AS2P59090 65 aa8.22□□□□□ -1.09
SPCS3-204ENST00000513139 FAM19A5Q7Z5A7 132 aaPredicted RBP8.22□□□□□ -1.09
SPCS3-204ENST00000513139 ATOH7Q8N100 152 aa8.22□□□□□ -1.09
SPCS3-204ENST00000513139 C20orf202A1L168 122 aa8.21□□□□□ -1.1
SPCS3-204ENST00000513139 CXCL5P42830 114 aa8.21□□□□□ -1.1
SPCS3-204ENST00000513139 UBE2BP63146 152 aa8.21□□□□□ -1.1
SPCS3-204ENST00000513139 ZNF625Q96I27 306 aaPredicted RBP8.21□□□□□ -1.1
SPCS3-204ENST00000513139 M0QXV9 152 aa8.2□□□□□ -1.1
SPCS3-204ENST00000513139 LEPROTO15243 131 aa8.2□□□□□ -1.1
SPCS3-204ENST00000513139 ZNF861PO60384 105 aa8.2□□□□□ -1.1
SPCS3-204ENST00000513139 GAGE2EQ4V326 116 aa8.2□□□□□ -1.1
SPCS3-204ENST00000513139 KRTAP7-1Q8IUC3 87 aa8.2□□□□□ -1.1
SPCS3-204ENST00000513139 GAGE2DQ9UEU5 116 aa8.2□□□□□ -1.1
SPCS3-204ENST00000513139 HERVK_113P61574 105 aa8.19□□□□□ -1.1
SPCS3-204ENST00000513139 PLEKHB2Q96CS7 222 aa8.19□□□□□ -1.1
SPCS3-204ENST00000513139 NDUFC2-KCTD14E9PQ53 114 aa8.18□□□□□ -1.1
SPCS3-204ENST00000513139 J3QQQ9 107 aa8.18□□□□□ -1.1
SPCS3-204ENST00000513139 NDUFA12Q9UI09 145 aa8.18□□□□□ -1.1
SPCS3-204ENST00000513139 IGKV2D-26A0A0A0MRZ7 120 aa8.17□□□□□ -1.1
SPCS3-204ENST00000513139 E9PLD3 99 aa8.17□□□□□ -1.1
SPCS3-204ENST00000513139 SCGB1D1O95968 90 aa8.17□□□□□ -1.1
SPCS3-204ENST00000513139 PFN2P35080 140 aa8.17□□□□□ -1.1
SPCS3-204ENST00000513139 LGALS3P17931 250 aaKnown RBP8.16□□□□□ -1.1
SPCS3-204ENST00000513139 TPRXLQ17RH7 258 aa8.16□□□□□ -1.1
SPCS3-204ENST00000513139 MUC17Q685J3 4493 aa8.16□□□□□ -1.1
SPCS3-204ENST00000513139 ERG28Q9UKR5 140 aa8.16□□□□□ -1.1
SPCS3-204ENST00000513139 A0A087X002 238 aa8.15□□□□□ -1.1
SPCS3-204ENST00000513139 A0A0U1RRA0 63 aa8.15□□□□□ -1.1
SPCS3-204ENST00000513139 MYMXA0A1B0GTQ4 84 aa8.15□□□□□ -1.1
SPCS3-204ENST00000513139 C9orf129Q5T035 196 aaKnown RBP8.15□□□□□ -1.1
SPCS3-204ENST00000513139 TYMSOSQ8TAI1 123 aa8.15□□□□□ -1.1
SPCS3-204ENST00000513139 TTTY13Q9BZ97 58 aa8.15□□□□□ -1.1
SPCS3-204ENST00000513139 XAGE1AQ9HD64 81 aa8.15□□□□□ -1.1
SPCS3-204ENST00000513139 CRCT1Q9UGL9 99 aa8.15□□□□□ -1.1
SPCS3-204ENST00000513139 CRYGAP11844 174 aa8.14□□□□□ -1.11
SPCS3-204ENST00000513139 KRTAP4-8Q9BYQ9 185 aa8.14□□□□□ -1.11
SPCS3-204ENST00000513139 SMIM13P0DJ93 91 aa8.13□□□□□ -1.11
SPCS3-204ENST00000513139 LINC00158P58513 81 aa8.13□□□□□ -1.11
SPCS3-204ENST00000513139 SFTA2Q6UW10 78 aa8.13□□□□□ -1.11
SPCS3-204ENST00000513139 AKR1D1P51857 326 aa8.12□□□□□ -1.11
SPCS3-204ENST00000513139 HERV-K104P63124 156 aa8.12□□□□□ -1.11
SPCS3-204ENST00000513139 MEIG1Q5JSS6 88 aa8.12□□□□□ -1.11
SPCS3-204ENST00000513139 NMUP48645 174 aa8.11□□□□□ -1.11
SPCS3-204ENST00000513139 COX17Q14061 63 aa8.11□□□□□ -1.11
SPCS3-204ENST00000513139 SND1-IT1Q9HBX3 110 aa8.11□□□□□ -1.11
SPCS3-204ENST00000513139 A0A0J9YXY3 114 aa8.1□□□□□ -1.11
SPCS3-204ENST00000513139 JOSD1Q15040 202 aaPredicted RBP8.1□□□□□ -1.11
SPCS3-204ENST00000513139 PCP2Q8IVA1 136 aa8.1□□□□□ -1.11
SPCS3-204ENST00000513139 FSIP2Q5CZC0 6907 aa8.1□□□□□ -1.11
SPCS3-204ENST00000513139 ZNF815PA8K554 130 aa8.09□□□□□ -1.11
SPCS3-204ENST00000513139 RPL28P46779 137 aaKnown RBP8.09□□□□□ -1.11
SPCS3-204ENST00000513139 CTAG1AP78358 180 aa8.09□□□□□ -1.11
SPCS3-204ENST00000513139 DAND5Q8N907 189 aa8.09□□□□□ -1.11
SPCS3-204ENST00000513139 RETNLBQ9BQ08 111 aa8.09□□□□□ -1.11
SPCS3-204ENST00000513139 IGLV7-46A0A075B6I9 117 aa8.08□□□□□ -1.12
SPCS3-204ENST00000513139 HSBP1L1C9JCN9 74 aa8.08□□□□□ -1.12
SPCS3-204ENST00000513139 LBHQ53QV2 105 aaPredicted RBP8.08□□□□□ -1.12
SPCS3-204ENST00000513139 ADAMTSL4-AS1Q5T5F5 129 aa8.08□□□□□ -1.12
SPCS3-204ENST00000513139 MIR7-3HGQ8N6C7 128 aa8.08□□□□□ -1.12
SPCS3-204ENST00000513139 LINC00587B1AMM8 73 aa8.06□□□□□ -1.12
SPCS3-204ENST00000513139 B5MCH6 92 aa8.06□□□□□ -1.12
SPCS3-204ENST00000513139 LINC01547P58512 204 aaPredicted RBP8.06□□□□□ -1.12
SPCS3-204ENST00000513139 PYY3Q5JQD4 70 aa8.06□□□□□ -1.12
SPCS3-204ENST00000513139 Q8NDZ9 215 aa8.06□□□□□ -1.12
SPCS3-204ENST00000513139 C22orf24Q9Y442 160 aa8.06□□□□□ -1.12
SPCS3-204ENST00000513139 BCE1O60756 84 aa8.05□□□□□ -1.12
SPCS3-204ENST00000513139 LINC00304Q8N9R0 145 aa8.05□□□□□ -1.12
SPCS3-204ENST00000513139 LITAFQ99732 161 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms