RNA–Protein interactions for RNA: ENST00000512482.1

COL6A5-204, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 5

Gene COL6A5, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-204ENST00000512482 C5orf56Q8N8D9 126 aa2.08□□□□□ -2.08
COL6A5-204ENST00000512482 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.07□□□□□ -2.08
COL6A5-204ENST00000512482 TRAV1-2A0A0B4J238 106 aa2.07□□□□□ -2.08
COL6A5-204ENST00000512482 SERF2P84101 59 aa2.07□□□□□ -2.08
COL6A5-204ENST00000512482 KRTAP5-5Q701N2 237 aaPredicted RBP2.07□□□□□ -2.08
COL6A5-204ENST00000512482 UBL5Q9BZL1 73 aa2.07□□□□□ -2.08
COL6A5-204ENST00000512482 IGKV4-1P06312 121 aa2.06□□□□□ -2.08
COL6A5-204ENST00000512482 SNRPGP62308 76 aaKnown RBP2.06□□□□□ -2.08
COL6A5-204ENST00000512482 PLNP26678 52 aa2.05□□□□□ -2.08
COL6A5-204ENST00000512482 LOC110117498A0A087WWA1 95 aa2.05□□□□□ -2.08
COL6A5-204ENST00000512482 TRGV1A0A0A0MS02 117 aa2.05□□□□□ -2.08
COL6A5-204ENST00000512482 COX6B1P14854 86 aa2.05□□□□□ -2.08
COL6A5-204ENST00000512482 ZNF625Q96I27 306 aaPredicted RBP2.05□□□□□ -2.08
COL6A5-204ENST00000512482 LINC00959A0A1B0GUT2 108 aa2.04□□□□□ -2.08
COL6A5-204ENST00000512482 COX17Q14061 63 aa2.04□□□□□ -2.08
COL6A5-204ENST00000512482 LINC01546A6NGU7 62 aa2.03□□□□□ -2.08
COL6A5-204ENST00000512482 IGIPA6NJ69 53 aa2.03□□□□□ -2.08
COL6A5-204ENST00000512482 M0R1W7 72 aa2.03□□□□□ -2.08
COL6A5-204ENST00000512482 IGLV6-57P01721 117 aa2.03□□□□□ -2.08
COL6A5-204ENST00000512482 LINC00315P59091 139 aa2.03□□□□□ -2.08
COL6A5-204ENST00000512482 DEFB112Q30KQ8 113 aa2.03□□□□□ -2.08
COL6A5-204ENST00000512482 GAFA1Q96PS6 74 aa2.03□□□□□ -2.08
COL6A5-204ENST00000512482 TMEM14CQ9P0S9 112 aa2.03□□□□□ -2.08
COL6A5-204ENST00000512482 TRGV2A0A075B6R0 118 aa2.03□□□□□ -2.09
COL6A5-204ENST00000512482 FXYD4P59646 89 aa2.03□□□□□ -2.09
COL6A5-204ENST00000512482 TECTAO75443 2155 aa2.02□□□□□ -2.09
COL6A5-204ENST00000512482 I3L3M4 83 aa2.02□□□□□ -2.09
COL6A5-204ENST00000512482 URB1O60287 2271 aaKnown RBP2.02□□□□□ -2.09
COL6A5-204ENST00000512482 H3BRN7 92 aa2.01□□□□□ -2.09
COL6A5-204ENST00000512482 NDUFA4O00483 81 aa2.01□□□□□ -2.09
COL6A5-204ENST00000512482 Q8N9L7 120 aa2.01□□□□□ -2.09
COL6A5-204ENST00000512482 INE1O15225 51 aa2□□□□□ -2.09
COL6A5-204ENST00000512482 SPINK4O60575 86 aa2□□□□□ -2.09
COL6A5-204ENST00000512482 ARL14EPLP0DKL9 152 aa2□□□□□ -2.09
COL6A5-204ENST00000512482 COA5Q86WW8 74 aa2□□□□□ -2.09
COL6A5-204ENST00000512482 TNRC6CQ9HCJ0 1690 aaKnown RBP2□□□□□ -2.09
COL6A5-204ENST00000512482 ACYP2P14621 99 aa1.99□□□□□ -2.09
COL6A5-204ENST00000512482 DEFB114Q30KQ6 69 aa1.99□□□□□ -2.09
COL6A5-204ENST00000512482 A0A1B0GU69 56 aa1.98□□□□□ -2.09
COL6A5-204ENST00000512482 M0R2N4 97 aa1.98□□□□□ -2.09
COL6A5-204ENST00000512482 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
COL6A5-204ENST00000512482 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
COL6A5-204ENST00000512482 TIMM8BQ9Y5J9 83 aaPredicted RBP1.98□□□□□ -2.09
COL6A5-204ENST00000512482 ANKRD17O75179 2603 aaKnown RBP1.98□□□□□ -2.09
COL6A5-204ENST00000512482 IGKV2D-24A0A075B6R9 120 aa1.98□□□□□ -2.09
COL6A5-204ENST00000512482 COX7BP24311 80 aa1.98□□□□□ -2.09
COL6A5-204ENST00000512482 IGLV4-60A0A075B6I1 120 aa1.97□□□□□ -2.09
COL6A5-204ENST00000512482 KRTAP13-2Q52LG2 175 aa1.97□□□□□ -2.09
COL6A5-204ENST00000512482 KCNQ1DNQ9H478 68 aa1.97□□□□□ -2.09
COL6A5-204ENST00000512482 SSC5DA1L4H1 1573 aa1.96□□□□□ -2.1
COL6A5-204ENST00000512482 KNTC1P50748 2209 aa1.96□□□□□ -2.1
COL6A5-204ENST00000512482 FXYD6P3P58550 94 aa1.95□□□□□ -2.1
COL6A5-204ENST00000512482 Q6ZRN7 208 aaPredicted RBP1.95□□□□□ -2.1
COL6A5-204ENST00000512482 ICE1Q9Y2F5 2266 aa1.95□□□□□ -2.1
COL6A5-204ENST00000512482 COL4A4P53420 1690 aaPredicted RBP1.95□□□□□ -2.1
COL6A5-204ENST00000512482 ASXL3Q9C0F0 2248 aa1.95□□□□□ -2.1
COL6A5-204ENST00000512482 KRTAP10-1P60331 282 aa1.95□□□□□ -2.1
COL6A5-204ENST00000512482 CCL19Q99731 98 aa1.95□□□□□ -2.1
COL6A5-204ENST00000512482 G3V318 75 aa1.94□□□□□ -2.1
COL6A5-204ENST00000512482 PRB2P02812 416 aaPredicted RBP1.94□□□□□ -2.1
COL6A5-204ENST00000512482 Q6ZQY7 126 aa1.94□□□□□ -2.1
COL6A5-204ENST00000512482 AHCTF1Q8WYP5 2266 aa1.93□□□□□ -2.1
COL6A5-204ENST00000512482 ETDCA0A1B0GVM5 59 aa1.93□□□□□ -2.1
COL6A5-204ENST00000512482 NDUFA3O95167 84 aa1.93□□□□□ -2.1
COL6A5-204ENST00000512482 HAMPP81172 84 aa1.93□□□□□ -2.1
COL6A5-204ENST00000512482 ASCC3Q8N3C0 2202 aaKnown RBP1.92□□□□□ -2.1
COL6A5-204ENST00000512482 SORL1Q92673 2214 aa1.92□□□□□ -2.1
COL6A5-204ENST00000512482 NCR3O14931 201 aa1.92□□□□□ -2.1
COL6A5-204ENST00000512482 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.92□□□□□ -2.1
COL6A5-204ENST00000512482 CNOT1A5YKK6 2376 aaKnown RBP1.9□□□□□ -2.1
COL6A5-204ENST00000512482 CPSF4LA6NMK7 179 aaKnown RBP1.9□□□□□ -2.1
COL6A5-204ENST00000512482 PRR9Q5T870 116 aa1.9□□□□□ -2.1
COL6A5-204ENST00000512482 Q6ZRX8 168 aa1.9□□□□□ -2.1
COL6A5-204ENST00000512482 IGKV2-28A0A075B6P5 120 aa1.9□□□□□ -2.11
COL6A5-204ENST00000512482 H0YGX0 51 aa1.9□□□□□ -2.11
COL6A5-204ENST00000512482 IGKV2D-28P01615 120 aa1.9□□□□□ -2.11
COL6A5-204ENST00000512482 SSBP3-AS1Q7Z2R9 100 aa1.9□□□□□ -2.11
COL6A5-204ENST00000512482 SMIM11BQ8TCY0 68 aa1.9□□□□□ -2.11
COL6A5-204ENST00000512482 A0A096LNT2 108 aa1.89□□□□□ -2.11
COL6A5-204ENST00000512482 GVQW2A0A096LPI5 108 aaPredicted RBP1.89□□□□□ -2.11
COL6A5-204ENST00000512482 C10orf99Q6UWK7 81 aa1.89□□□□□ -2.11
COL6A5-204ENST00000512482 PLAC4Q8WY50 150 aa1.89□□□□□ -2.11
COL6A5-204ENST00000512482 LY6G6CO95867 125 aa1.88□□□□□ -2.11
COL6A5-204ENST00000512482 DOPEY2Q9Y3R5 2298 aa1.88□□□□□ -2.11
COL6A5-204ENST00000512482 IGKV2-24A0A0C4DH68 120 aa1.87□□□□□ -2.11
COL6A5-204ENST00000512482 PIN1P1O15428 100 aa1.87□□□□□ -2.11
COL6A5-204ENST00000512482 PRB1P04280 392 aa1.87□□□□□ -2.11
COL6A5-204ENST00000512482 TMEM167BQ9NRX6 74 aa1.87□□□□□ -2.11
COL6A5-204ENST00000512482 DEFB131BA0A096LNP1 70 aa1.86□□□□□ -2.11
COL6A5-204ENST00000512482 CRIP1P50238 77 aa1.86□□□□□ -2.11
COL6A5-204ENST00000512482 RPL38P63173 70 aaKnown RBP1.86□□□□□ -2.11
COL6A5-204ENST00000512482 PP632Q6XCG6 107 aa1.85□□□□□ -2.11
COL6A5-204ENST00000512482 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.85□□□□□ -2.11
COL6A5-204ENST00000512482 COL6A6A6NMZ7 2263 aa1.84□□□□□ -2.11
COL6A5-204ENST00000512482 ZDBF2Q9HCK1 2354 aa1.84□□□□□ -2.11
COL6A5-204ENST00000512482 ANGP03950 147 aaKnown RBP1.84□□□□□ -2.12
COL6A5-204ENST00000512482 PTPRQQ9UMZ3 2332 aa1.84□□□□□ -2.12
COL6A5-204ENST00000512482 SPTY2D1-AS1A0A0U1RR47 76 aa1.83□□□□□ -2.12
COL6A5-204ENST00000512482 MRPL33O75394 65 aaKnown RBP1.83□□□□□ -2.12
COL6A5-204ENST00000512482 LINC00158P58513 81 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms