RNA–Protein interactions for RNA: ENST00000512258.1

MSH3-202, Transcript of mutS homolog 3, humanhuman

TSL 3

Gene MSH3, Length 677 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-202ENST00000512258 E9PLD3 99 aa3.26□□□□□ -1.89
MSH3-202ENST00000512258 PANO1I0J062 215 aa3.26□□□□□ -1.89
MSH3-202ENST00000512258 J3QQQ9 107 aa3.26□□□□□ -1.89
MSH3-202ENST00000512258 PRYO14603 147 aa3.26□□□□□ -1.89
MSH3-202ENST00000512258 NDUFA1O15239 70 aa3.26□□□□□ -1.89
MSH3-202ENST00000512258 CKS1BP61024 79 aa3.26□□□□□ -1.89
MSH3-202ENST00000512258 CNBPP62633 177 aaKnown RBP3.26□□□□□ -1.89
MSH3-202ENST00000512258 PCP2Q8IVA1 136 aa3.26□□□□□ -1.89
MSH3-202ENST00000512258 C2orf48Q96LS8 159 aa3.26□□□□□ -1.89
MSH3-202ENST00000512258 CARD19Q96LW7 228 aa3.26□□□□□ -1.89
MSH3-202ENST00000512258 DNAH5Q8TE73 4624 aa3.26□□□□□ -1.89
MSH3-202ENST00000512258 A0A096LNI7 61 aa3.25□□□□□ -1.89
MSH3-202ENST00000512258 A0A0U1RRA0 63 aa3.25□□□□□ -1.89
MSH3-202ENST00000512258 CHTF8P0CG12 524 aa3.25□□□□□ -1.89
MSH3-202ENST00000512258 NMUP48645 174 aa3.25□□□□□ -1.89
MSH3-202ENST00000512258 HERVK_113P61574 105 aa3.25□□□□□ -1.89
MSH3-202ENST00000512258 HAMPP81172 84 aa3.25□□□□□ -1.89
MSH3-202ENST00000512258 LCE3EQ5T5B0 92 aa3.25□□□□□ -1.89
MSH3-202ENST00000512258 SDIM1Q6ZPB5 146 aa3.25□□□□□ -1.89
MSH3-202ENST00000512258 C9orf163Q8N9P6 203 aa3.25□□□□□ -1.89
MSH3-202ENST00000512258 PLEKHB2Q96CS7 222 aa3.25□□□□□ -1.89
MSH3-202ENST00000512258 NDUFA12Q9UI09 145 aa3.25□□□□□ -1.89
MSH3-202ENST00000512258 PAM16Q9Y3D7 125 aa3.25□□□□□ -1.89
MSH3-202ENST00000512258 IGKV2-24A0A0C4DH68 120 aa3.24□□□□□ -1.89
MSH3-202ENST00000512258 C16orf90A8MZG2 172 aa3.24□□□□□ -1.89
MSH3-202ENST00000512258 SMIM13P0DJ93 91 aa3.24□□□□□ -1.89
MSH3-202ENST00000512258 LGALS3P17931 250 aaKnown RBP3.24□□□□□ -1.89
MSH3-202ENST00000512258 PFN2P35080 140 aa3.24□□□□□ -1.89
MSH3-202ENST00000512258 RPL18AQ02543 176 aaKnown RBP3.24□□□□□ -1.89
MSH3-202ENST00000512258 GAGE2BQ13066 116 aa3.24□□□□□ -1.89
MSH3-202ENST00000512258 SPATA45Q537H7 98 aa3.24□□□□□ -1.89
MSH3-202ENST00000512258 Q6ZRP5 223 aa3.24□□□□□ -1.89
MSH3-202ENST00000512258 KRTAP5-5Q701N2 237 aaPredicted RBP3.24□□□□□ -1.89
MSH3-202ENST00000512258 DYNC1H1Q14204 4646 aaKnown RBP3.24□□□□□ -1.89
MSH3-202ENST00000512258 PKHD1P08F94 4074 aa3.24□□□□□ -1.89
MSH3-202ENST00000512258 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.23□□□□□ -1.89
MSH3-202ENST00000512258 A0A0J9YXY3 114 aa3.23□□□□□ -1.89
MSH3-202ENST00000512258 TRBV30A0A0K0K1B3 111 aa3.23□□□□□ -1.89
MSH3-202ENST00000512258 MYMXA0A1B0GTQ4 84 aa3.23□□□□□ -1.89
MSH3-202ENST00000512258 ZNF815PA8K554 130 aa3.23□□□□□ -1.89
MSH3-202ENST00000512258 F8WDY8 70 aa3.23□□□□□ -1.89
MSH3-202ENST00000512258 CXCL5P42830 114 aa3.23□□□□□ -1.89
MSH3-202ENST00000512258 GAGE2EQ4V326 116 aa3.23□□□□□ -1.89
MSH3-202ENST00000512258 ADAMTSL4-AS1Q5T5F5 129 aa3.23□□□□□ -1.89
MSH3-202ENST00000512258 DAND5Q8N907 189 aa3.23□□□□□ -1.89
MSH3-202ENST00000512258 C14orf144Q96I85 54 aa3.23□□□□□ -1.89
MSH3-202ENST00000512258 VAMP8Q9BV40 100 aa3.23□□□□□ -1.89
MSH3-202ENST00000512258 XAGE1AQ9HD64 81 aa3.23□□□□□ -1.89
MSH3-202ENST00000512258 GAGE2DQ9UEU5 116 aa3.23□□□□□ -1.89
MSH3-202ENST00000512258 ERG28Q9UKR5 140 aa3.23□□□□□ -1.89
MSH3-202ENST00000512258 LOC107984640A0A0U1RRK4 108 aa3.22□□□□□ -1.89
MSH3-202ENST00000512258 FAM168BA1KXE4 195 aa3.22□□□□□ -1.89
MSH3-202ENST00000512258 HSBP1L1C9JCN9 74 aa3.22□□□□□ -1.89
MSH3-202ENST00000512258 NDUFC2-KCTD14E9PQ53 114 aa3.22□□□□□ -1.89
MSH3-202ENST00000512258 TLX1NBP0CAT3 122 aa3.22□□□□□ -1.89
MSH3-202ENST00000512258 LINC00158P58513 81 aa3.22□□□□□ -1.89
MSH3-202ENST00000512258 NPC2P61916 151 aa3.22□□□□□ -1.89
MSH3-202ENST00000512258 KRTAP13-3Q3SY46 172 aa3.22□□□□□ -1.89
MSH3-202ENST00000512258 MEIG1Q5JSS6 88 aa3.22□□□□□ -1.89
MSH3-202ENST00000512258 C9orf129Q5T035 196 aaKnown RBP3.22□□□□□ -1.89
MSH3-202ENST00000512258 KRTAP7-1Q8IUC3 87 aa3.22□□□□□ -1.89
MSH3-202ENST00000512258 Q8NDZ9 215 aa3.22□□□□□ -1.89
MSH3-202ENST00000512258 LITAFQ99732 161 aa3.22□□□□□ -1.89
MSH3-202ENST00000512258 LRP1BQ9NZR2 4599 aa3.21□□□□□ -1.9
MSH3-202ENST00000512258 A0A1W2PNN7 141 aa3.21□□□□□ -1.9
MSH3-202ENST00000512258 SMIM6P0DI80 62 aa3.21□□□□□ -1.9
MSH3-202ENST00000512258 COX8AP10176 69 aa3.21□□□□□ -1.9
MSH3-202ENST00000512258 HERV-K104P63124 156 aa3.21□□□□□ -1.9
MSH3-202ENST00000512258 SERTAD4-AS1Q5TG53 156 aa3.21□□□□□ -1.9
MSH3-202ENST00000512258 SOSTDC1Q6X4U4 206 aa3.21□□□□□ -1.9
MSH3-202ENST00000512258 Q6ZSA8 131 aa3.21□□□□□ -1.9
MSH3-202ENST00000512258 BOD1L2Q8IYS8 172 aa3.21□□□□□ -1.9
MSH3-202ENST00000512258 MIR7-3HGQ8N6C7 128 aa3.21□□□□□ -1.9
MSH3-202ENST00000512258 SPACA4Q8TDM5 124 aa3.21□□□□□ -1.9
MSH3-202ENST00000512258 PRO1933Q9H354 126 aa3.21□□□□□ -1.9
MSH3-202ENST00000512258 SND1-IT1Q9HBX3 110 aa3.21□□□□□ -1.9
MSH3-202ENST00000512258 XGP55808 180 aa3.2□□□□□ -1.9
MSH3-202ENST00000512258 PRR3P79522 188 aaKnown RBP3.2□□□□□ -1.9
MSH3-202ENST00000512258 CIRBPQ14011 172 aaKnown RBP3.2□□□□□ -1.9
MSH3-202ENST00000512258 SCGB1D4Q6XE38 83 aa3.2□□□□□ -1.9
MSH3-202ENST00000512258 SCXQ7RTU7 201 aa3.2□□□□□ -1.9
MSH3-202ENST00000512258 FAM19A5Q7Z5A7 132 aaPredicted RBP3.2□□□□□ -1.9
MSH3-202ENST00000512258 CIRBP-AS1Q8TBR5 109 aa3.2□□□□□ -1.9
MSH3-202ENST00000512258 DPH3Q96FX2 82 aa3.2□□□□□ -1.9
MSH3-202ENST00000512258 C12orf57Q99622 126 aa3.2□□□□□ -1.9
MSH3-202ENST00000512258 DNAH8Q96JB1 4490 aa3.19□□□□□ -1.9
MSH3-202ENST00000512258 BIRC6Q9NR09 4857 aa3.19□□□□□ -1.9
MSH3-202ENST00000512258 COX17Q14061 63 aa3.19□□□□□ -1.9
MSH3-202ENST00000512258 SLC25A34Q6PIV7 304 aa3.19□□□□□ -1.9
MSH3-202ENST00000512258 SFTA2Q6UW10 78 aa3.19□□□□□ -1.9
MSH3-202ENST00000512258 C2orf91Q6ZV80 131 aa3.19□□□□□ -1.9
MSH3-202ENST00000512258 SMIM29Q86T20 159 aa3.19□□□□□ -1.9
MSH3-202ENST00000512258 KRTAP11-1Q8IUC1 163 aa3.19□□□□□ -1.9
MSH3-202ENST00000512258 LINC00518Q8N0U6 118 aa3.19□□□□□ -1.9
MSH3-202ENST00000512258 KIAA1109Q2LD37 5005 aa3.18□□□□□ -1.9
MSH3-202ENST00000512258 NCR3O14931 201 aa3.18□□□□□ -1.9
MSH3-202ENST00000512258 DLEU1O43261 78 aa3.18□□□□□ -1.9
MSH3-202ENST00000512258 TIMM17BO60830 172 aa3.18□□□□□ -1.9
MSH3-202ENST00000512258 SMR3BP02814 79 aaPredicted RBP3.18□□□□□ -1.9
MSH3-202ENST00000512258 VPREB1P12018 145 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms