RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 XCL1P47992 114 aa3.42□□□□□ -1.86
TRAPPC11-208ENST00000511955 WT1-ASQ06250 92 aa3.42□□□□□ -1.86
TRAPPC11-208ENST00000511955 MIAQ16674 131 aa3.42□□□□□ -1.86
TRAPPC11-208ENST00000511955 U3KQK5 164 aa3.42□□□□□ -1.86
TRAPPC11-208ENST00000511955 TGP01266 2768 aa3.42□□□□□ -1.86
TRAPPC11-208ENST00000511955 IGHV3OR16-8A0A075B7F1 116 aa3.42□□□□□ -1.86
TRAPPC11-208ENST00000511955 C16orf90A8MZG2 172 aa3.42□□□□□ -1.86
TRAPPC11-208ENST00000511955 IGLV1-51P01701 117 aa3.42□□□□□ -1.86
TRAPPC11-208ENST00000511955 PRB2P02812 416 aaPredicted RBP3.42□□□□□ -1.86
TRAPPC11-208ENST00000511955 PLNP26678 52 aa3.42□□□□□ -1.86
TRAPPC11-208ENST00000511955 C15orf32Q32M92 178 aa3.42□□□□□ -1.86
TRAPPC11-208ENST00000511955 C1orf134Q5TEV5 83 aa3.42□□□□□ -1.86
TRAPPC11-208ENST00000511955 A0A1B0GUT8 65 aa3.41□□□□□ -1.86
TRAPPC11-208ENST00000511955 TMEM223A0PJW6 202 aa3.41□□□□□ -1.86
TRAPPC11-208ENST00000511955 P0C879 139 aa3.41□□□□□ -1.86
TRAPPC11-208ENST00000511955 CFC1P0CG37 223 aa3.41□□□□□ -1.86
TRAPPC11-208ENST00000511955 ASB16-AS1Q495Z4 193 aa3.41□□□□□ -1.86
TRAPPC11-208ENST00000511955 SMCR5Q8TEV8 140 aa3.41□□□□□ -1.86
TRAPPC11-208ENST00000511955 NDUFA4L2Q9NRX3 87 aa3.41□□□□□ -1.86
TRAPPC11-208ENST00000511955 TMEM14BQ9NUH8 114 aa3.41□□□□□ -1.86
TRAPPC11-208ENST00000511955 IGHV3-66A0A0C4DH42 116 aa3.41□□□□□ -1.86
TRAPPC11-208ENST00000511955 LINC01546A6NGU7 62 aa3.41□□□□□ -1.86
TRAPPC11-208ENST00000511955 HCG22E2RYF7 251 aa3.41□□□□□ -1.86
TRAPPC11-208ENST00000511955 CRPP02741 224 aa3.41□□□□□ -1.86
TRAPPC11-208ENST00000511955 CAMK2N1Q7Z7J9 78 aa3.41□□□□□ -1.86
TRAPPC11-208ENST00000511955 hDV103S1A0JD37 113 aa3.4□□□□□ -1.87
TRAPPC11-208ENST00000511955 SOCS3O14543 225 aa3.4□□□□□ -1.87
TRAPPC11-208ENST00000511955 LECT2O14960 151 aa3.4□□□□□ -1.87
TRAPPC11-208ENST00000511955 SH2D1AO60880 128 aa3.4□□□□□ -1.87
TRAPPC11-208ENST00000511955 IGHV3-33P01772 117 aa3.4□□□□□ -1.87
TRAPPC11-208ENST00000511955 PRCDQ00LT1 54 aa3.4□□□□□ -1.87
TRAPPC11-208ENST00000511955 D6R8Y8 96 aa3.39□□□□□ -1.87
TRAPPC11-208ENST00000511955 H7C423 109 aa3.39□□□□□ -1.87
TRAPPC11-208ENST00000511955 ERHP84090 104 aaKnown RBP3.39□□□□□ -1.87
TRAPPC11-208ENST00000511955 FAM229BQ4G0N7 80 aa3.39□□□□□ -1.87
TRAPPC11-208ENST00000511955 C1orf64Q8NEQ6 169 aa3.39□□□□□ -1.87
TRAPPC11-208ENST00000511955 C4orf3Q8WVX3 66 aa3.39□□□□□ -1.87
TRAPPC11-208ENST00000511955 CHCHD7Q9BUK0 85 aa3.39□□□□□ -1.87
TRAPPC11-208ENST00000511955 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC11-208ENST00000511955 MUC4Q99102 2169 aa3.39□□□□□ -1.87
TRAPPC11-208ENST00000511955 IGLV11-55A0A075B6I3 123 aa3.39□□□□□ -1.87
TRAPPC11-208ENST00000511955 TRBV30A0A0K0K1B3 111 aa3.39□□□□□ -1.87
TRAPPC11-208ENST00000511955 ZNF815PA8K554 130 aa3.39□□□□□ -1.87
TRAPPC11-208ENST00000511955 ROMO1P60602 79 aa3.39□□□□□ -1.87
TRAPPC11-208ENST00000511955 C9orf116Q5BN46 136 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC11-208ENST00000511955 C20orf197Q8N268 126 aa3.39□□□□□ -1.87
TRAPPC11-208ENST00000511955 NBEAL2Q6ZNJ1 2754 aa3.39□□□□□ -1.87
TRAPPC11-208ENST00000511955 IGLV1-50A0A075B6I6 118 aa3.38□□□□□ -1.87
TRAPPC11-208ENST00000511955 IGHV3-73A0A0B4J1V6 119 aa3.38□□□□□ -1.87
TRAPPC11-208ENST00000511955 LYZL1Q6UWQ5 148 aa3.38□□□□□ -1.87
TRAPPC11-208ENST00000511955 Q8N3U1 123 aa3.38□□□□□ -1.87
TRAPPC11-208ENST00000511955 CIRBP-AS1Q8TBR5 109 aa3.38□□□□□ -1.87
TRAPPC11-208ENST00000511955 CMYA5Q8N3K9 4069 aa3.38□□□□□ -1.87
TRAPPC11-208ENST00000511955 A0A087X002 238 aa3.38□□□□□ -1.87
TRAPPC11-208ENST00000511955 TRAV12-1A0A0B4J245 112 aa3.38□□□□□ -1.87
TRAPPC11-208ENST00000511955 FAM223BA6NKX1 122 aa3.38□□□□□ -1.87
TRAPPC11-208ENST00000511955 F8VRH5 84 aa3.38□□□□□ -1.87
TRAPPC11-208ENST00000511955 K7EIM0 57 aa3.38□□□□□ -1.87
TRAPPC11-208ENST00000511955 IGHV3-30P01768 117 aa3.38□□□□□ -1.87
TRAPPC11-208ENST00000511955 ARMS2P0C7Q2 107 aa3.38□□□□□ -1.87
TRAPPC11-208ENST00000511955 IGHV3-30-5P0DP03 117 aa3.38□□□□□ -1.87
TRAPPC11-208ENST00000511955 KLKP1Q107X0 134 aa3.38□□□□□ -1.87
TRAPPC11-208ENST00000511955 Q1RN00 199 aa3.38□□□□□ -1.87
TRAPPC11-208ENST00000511955 Q6JHZ5 121 aa3.38□□□□□ -1.87
TRAPPC11-208ENST00000511955 TMEM263Q8WUH6 116 aaKnown RBP3.38□□□□□ -1.87
TRAPPC11-208ENST00000511955 USMG5Q96IX5 58 aa3.38□□□□□ -1.87
TRAPPC11-208ENST00000511955 MRPL36Q9P0J6 103 aaKnown RBP3.38□□□□□ -1.87
TRAPPC11-208ENST00000511955 IGKV3-7A0A075B6H7 116 aa3.37□□□□□ -1.87
TRAPPC11-208ENST00000511955 H3BUA1 57 aa3.37□□□□□ -1.87
TRAPPC11-208ENST00000511955 Q8NDZ9 215 aa3.37□□□□□ -1.87
TRAPPC11-208ENST00000511955 TIMM21Q9BVV7 248 aa3.37□□□□□ -1.87
TRAPPC11-208ENST00000511955 A0A1B0GVX0 72 aa3.37□□□□□ -1.87
TRAPPC11-208ENST00000511955 COX6CP09669 75 aa3.37□□□□□ -1.87
TRAPPC11-208ENST00000511955 TLX1NBP0CAT3 122 aa3.37□□□□□ -1.87
TRAPPC11-208ENST00000511955 LINC00322Q6ZN03 302 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC11-208ENST00000511955 A0A0J9YY99 117 aa3.36□□□□□ -1.87
TRAPPC11-208ENST00000511955 I3L2K1 104 aa3.36□□□□□ -1.87
TRAPPC11-208ENST00000511955 INSP01308 110 aa3.36□□□□□ -1.87
TRAPPC11-208ENST00000511955 CTSGP08311 255 aa3.36□□□□□ -1.87
TRAPPC11-208ENST00000511955 F8WEM9 126 aa3.36□□□□□ -1.87
TRAPPC11-208ENST00000511955 BPY2O14599 106 aa3.36□□□□□ -1.87
TRAPPC11-208ENST00000511955 COL7A1Q02388 2944 aa3.35□□□□□ -1.87
TRAPPC11-208ENST00000511955 BCE1O60756 84 aa3.35□□□□□ -1.87
TRAPPC11-208ENST00000511955 KRTAP10-11P60412 298 aa3.35□□□□□ -1.87
TRAPPC11-208ENST00000511955 CYP4F30PQ9H0H9 118 aa3.35□□□□□ -1.87
TRAPPC11-208ENST00000511955 SMAD5-AS1Q9Y6J3 95 aa3.35□□□□□ -1.87
TRAPPC11-208ENST00000511955 ICOSQ9Y6W8 199 aa3.35□□□□□ -1.87
TRAPPC11-208ENST00000511955 TRAV22A0A0B4J277 110 aa3.35□□□□□ -1.87
TRAPPC11-208ENST00000511955 Q6ZQT0 140 aa3.35□□□□□ -1.87
TRAPPC11-208ENST00000511955 WFDC9Q8NEX5 89 aa3.35□□□□□ -1.87
TRAPPC11-208ENST00000511955 FAM167A-AS1Q96KT0 104 aa3.35□□□□□ -1.87
TRAPPC11-208ENST00000511955 IGKV1OR2-108A0A075B7D4 117 aa3.34□□□□□ -1.87
TRAPPC11-208ENST00000511955 TRBV6-1A0A0K0K1D8 114 aa3.34□□□□□ -1.87
TRAPPC11-208ENST00000511955 H7C2G1 150 aa3.34□□□□□ -1.87
TRAPPC11-208ENST00000511955 IGKV1-17P01599 117 aa3.34□□□□□ -1.87
TRAPPC11-208ENST00000511955 CASC2Q6XLA1 102 aa3.34□□□□□ -1.87
TRAPPC11-208ENST00000511955 A8MU10 97 aa3.33□□□□□ -1.88
TRAPPC11-208ENST00000511955 LYZP61626 148 aa3.33□□□□□ -1.88
TRAPPC11-208ENST00000511955 Q86TA4 180 aa3.33□□□□□ -1.88
TRAPPC11-208ENST00000511955 LINC00467Q9BRT7 94 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms