RNA–Protein interactions for RNA: ENST00000511023.1

COL12A1-210, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-210ENST00000511023 IGKV2D-28P01615 120 aa8.69□□□□□ -1.02
COL12A1-210ENST00000511023 FABP4P15090 132 aa8.69□□□□□ -1.02
COL12A1-210ENST00000511023 KRTAP13-1Q8IUC0 172 aa8.69□□□□□ -1.02
COL12A1-210ENST00000511023 IGLV1-50A0A075B6I6 118 aa8.68□□□□□ -1.02
COL12A1-210ENST00000511023 LINC00158P58513 81 aa8.68□□□□□ -1.02
COL12A1-210ENST00000511023 TSPEAR-AS2P59090 65 aa8.68□□□□□ -1.02
COL12A1-210ENST00000511023 SMIM13P0DJ93 91 aa8.67□□□□□ -1.02
COL12A1-210ENST00000511023 RPL28P46779 137 aaKnown RBP8.67□□□□□ -1.02
COL12A1-210ENST00000511023 PMCHL2Q9BQD1 86 aa8.67□□□□□ -1.02
COL12A1-210ENST00000511023 HSPB8Q9UJY1 196 aa8.67□□□□□ -1.02
COL12A1-210ENST00000511023 RPL24P83731 157 aaKnown RBP8.66□□□□□ -1.02
COL12A1-210ENST00000511023 NDUFA12Q9UI09 145 aa8.66□□□□□ -1.02
COL12A1-210ENST00000511023 TMEM238C9JI98 176 aa8.65□□□□□ -1.02
COL12A1-210ENST00000511023 HIST1H2BKO60814 126 aa8.65□□□□□ -1.02
COL12A1-210ENST00000511023 HIST1H2BJP06899 126 aa8.65□□□□□ -1.02
COL12A1-210ENST00000511023 HIST1H2BOP23527 126 aa8.65□□□□□ -1.02
COL12A1-210ENST00000511023 PLNP26678 52 aa8.65□□□□□ -1.02
COL12A1-210ENST00000511023 HIST1H2BBP33778 126 aa8.65□□□□□ -1.02
COL12A1-210ENST00000511023 HIST1H2BDP58876 126 aa8.65□□□□□ -1.02
COL12A1-210ENST00000511023 HIST1H2BCP62807 126 aa8.65□□□□□ -1.02
COL12A1-210ENST00000511023 HIST2H2BEQ16778 126 aa8.65□□□□□ -1.02
COL12A1-210ENST00000511023 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.65□□□□□ -1.02
COL12A1-210ENST00000511023 HIST1H2BHQ93079 126 aa8.65□□□□□ -1.02
COL12A1-210ENST00000511023 HIST1H2BNQ99877 126 aa8.65□□□□□ -1.02
COL12A1-210ENST00000511023 HIST1H2BMQ99879 126 aa8.65□□□□□ -1.02
COL12A1-210ENST00000511023 LEPROTO15243 131 aa8.64□□□□□ -1.03
COL12A1-210ENST00000511023 DPM2O94777 84 aa8.64□□□□□ -1.03
COL12A1-210ENST00000511023 HERV-K104P63124 156 aa8.64□□□□□ -1.03
COL12A1-210ENST00000511023 TMEM126AQ9H061 195 aa8.64□□□□□ -1.03
COL12A1-210ENST00000511023 M0R378 163 aa8.63□□□□□ -1.03
COL12A1-210ENST00000511023 UBE2AP49459 152 aa8.63□□□□□ -1.03
COL12A1-210ENST00000511023 MEIG1Q5JSS6 88 aa8.63□□□□□ -1.03
COL12A1-210ENST00000511023 MIR7-3HGQ8N6C7 128 aa8.63□□□□□ -1.03
COL12A1-210ENST00000511023 A0A087X002 238 aa8.62□□□□□ -1.03
COL12A1-210ENST00000511023 MYMXA0A1B0GTQ4 84 aa8.62□□□□□ -1.03
COL12A1-210ENST00000511023 IGKCP01834 107 aa8.62□□□□□ -1.03
COL12A1-210ENST00000511023 RPL13AP40429 203 aaKnown RBP8.61□□□□□ -1.03
COL12A1-210ENST00000511023 PRLHP81277 87 aa8.61□□□□□ -1.03
COL12A1-210ENST00000511023 BOD1L2Q8IYS8 172 aa8.61□□□□□ -1.03
COL12A1-210ENST00000511023 PLEKHB2Q96CS7 222 aa8.61□□□□□ -1.03
COL12A1-210ENST00000511023 MAP1LC3CQ9BXW4 147 aa8.61□□□□□ -1.03
COL12A1-210ENST00000511023 ANAPC11Q9NYG5 84 aa8.61□□□□□ -1.03
COL12A1-210ENST00000511023 LPAP08519 4548 aa8.61□□□□□ -1.03
COL12A1-210ENST00000511023 J3QQQ9 107 aa8.6□□□□□ -1.03
COL12A1-210ENST00000511023 FAM19A1Q7Z5A9 133 aa8.6□□□□□ -1.03
COL12A1-210ENST00000511023 ATP6V1G1O75348 118 aa8.59□□□□□ -1.03
COL12A1-210ENST00000511023 DAND5Q8N907 189 aa8.59□□□□□ -1.03
COL12A1-210ENST00000511023 LINC00587B1AMM8 73 aa8.58□□□□□ -1.04
COL12A1-210ENST00000511023 SYS1-DBNDD2H3BUS1 97 aa8.58□□□□□ -1.04
COL12A1-210ENST00000511023 NCR3O14931 201 aa8.58□□□□□ -1.04
COL12A1-210ENST00000511023 HERVK_113P61574 105 aa8.58□□□□□ -1.04
COL12A1-210ENST00000511023 KRTAP13-2Q52LG2 175 aa8.57□□□□□ -1.04
COL12A1-210ENST00000511023 CRYGAP11844 174 aa8.56□□□□□ -1.04
COL12A1-210ENST00000511023 NMUP48645 174 aa8.56□□□□□ -1.04
COL12A1-210ENST00000511023 RNF213Q63HN8 5207 aa8.56□□□□□ -1.04
COL12A1-210ENST00000511023 LOC107984156A0A0G2JMH3 177 aa8.55□□□□□ -1.04
COL12A1-210ENST00000511023 LGALS3P17931 250 aaKnown RBP8.55□□□□□ -1.04
COL12A1-210ENST00000511023 ARL17AQ8IVW1 177 aa8.55□□□□□ -1.04
COL12A1-210ENST00000511023 IGKV2D-26A0A0A0MRZ7 120 aa8.54□□□□□ -1.04
COL12A1-210ENST00000511023 E9PLD3 99 aa8.54□□□□□ -1.04
COL12A1-210ENST00000511023 COA6Q5JTJ3 125 aaKnown RBP8.54□□□□□ -1.04
COL12A1-210ENST00000511023 LINC01545Q5VT33 79 aa8.54□□□□□ -1.04
COL12A1-210ENST00000511023 TRBV10-3A0A0K0K1G6 114 aa8.53□□□□□ -1.04
COL12A1-210ENST00000511023 PRYO14603 147 aa8.53□□□□□ -1.04
COL12A1-210ENST00000511023 SPRR1AP35321 89 aa8.53□□□□□ -1.04
COL12A1-210ENST00000511023 FAM229BQ4G0N7 80 aa8.53□□□□□ -1.04
COL12A1-210ENST00000511023 TYMSOSQ8TAI1 123 aa8.53□□□□□ -1.04
COL12A1-210ENST00000511023 KCNQ1DNQ9H478 68 aa8.53□□□□□ -1.04
COL12A1-210ENST00000511023 A0A0J9YXY3 114 aa8.52□□□□□ -1.05
COL12A1-210ENST00000511023 KRTAP4-16G5E9R7 235 aaPredicted RBP8.52□□□□□ -1.05
COL12A1-210ENST00000511023 EIF4EBP3O60516 100 aaPredicted RBP8.52□□□□□ -1.05
COL12A1-210ENST00000511023 C3orf79P0CE67 100 aa8.52□□□□□ -1.05
COL12A1-210ENST00000511023 ADAMTSL4-AS1Q5T5F5 129 aa8.52□□□□□ -1.05
COL12A1-210ENST00000511023 PET117Q6UWS5 81 aa8.52□□□□□ -1.05
COL12A1-210ENST00000511023 HIGD2AQ9BW72 106 aa8.52□□□□□ -1.05
COL12A1-210ENST00000511023 SOSTDC1Q6X4U4 206 aa8.51□□□□□ -1.05
COL12A1-210ENST00000511023 TSPAN13O95857 204 aa8.5□□□□□ -1.05
COL12A1-210ENST00000511023 LINC00337Q8N6G1 96 aa8.5□□□□□ -1.05
COL12A1-210ENST00000511023 TRBV10-2A0A0K0K1G8 114 aa8.49□□□□□ -1.05
COL12A1-210ENST00000511023 NPC2P61916 151 aa8.48□□□□□ -1.05
COL12A1-210ENST00000511023 SPRR4Q96PI1 79 aa8.48□□□□□ -1.05
COL12A1-210ENST00000511023 LITAFQ99732 161 aa8.48□□□□□ -1.05
COL12A1-210ENST00000511023 NDUFC2O95298 119 aa8.47□□□□□ -1.05
COL12A1-210ENST00000511023 DDTP30046 118 aa8.47□□□□□ -1.05
COL12A1-210ENST00000511023 KRTDAPP60985 99 aa8.47□□□□□ -1.05
COL12A1-210ENST00000511023 C3orf22Q8N5N4 141 aa8.47□□□□□ -1.05
COL12A1-210ENST00000511023 MIEN1Q9BRT3 115 aa8.47□□□□□ -1.05
COL12A1-210ENST00000511023 TTTY13Q9BZ97 58 aa8.47□□□□□ -1.05
COL12A1-210ENST00000511023 SPANXB1Q9NS25 103 aaPredicted RBP8.47□□□□□ -1.05
COL12A1-210ENST00000511023 ETDCA0A1B0GVM5 59 aa8.46□□□□□ -1.06
COL12A1-210ENST00000511023 PRR4Q16378 134 aa8.46□□□□□ -1.06
COL12A1-210ENST00000511023 SMCR5Q8TEV8 140 aa8.46□□□□□ -1.06
COL12A1-210ENST00000511023 B5MCH6 92 aa8.45□□□□□ -1.06
COL12A1-210ENST00000511023 IGLV6-57P01721 117 aa8.45□□□□□ -1.06
COL12A1-210ENST00000511023 LINC00304Q8N9R0 145 aa8.44□□□□□ -1.06
COL12A1-210ENST00000511023 ZNF815PA8K554 130 aa8.43□□□□□ -1.06
COL12A1-210ENST00000511023 TIMM17BO60830 172 aa8.43□□□□□ -1.06
COL12A1-210ENST00000511023 ERC2-IT1O76042 136 aa8.43□□□□□ -1.06
COL12A1-210ENST00000511023 LINC00308Q8TCZ7 52 aa8.43□□□□□ -1.06
COL12A1-210ENST00000511023 S100A7L2Q5SY68 101 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 385.2 ms