RNA–Protein interactions for RNA: ENST00000510710.3

COL1A1-212, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,147 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-212ENST00000510710 TTTY13Q9BZ97 58 aa9.19□□□□□ -0.94
COL1A1-212ENST00000510710 HSBP1L1C9JCN9 74 aa9.18□□□□□ -0.94
COL1A1-212ENST00000510710 NMUP48645 174 aa9.18□□□□□ -0.94
COL1A1-212ENST00000510710 VAMP8Q9BV40 100 aa9.18□□□□□ -0.94
COL1A1-212ENST00000510710 C6orf48Q9UBA6 75 aa9.18□□□□□ -0.94
COL1A1-212ENST00000510710 NDUFA12Q9UI09 145 aa9.18□□□□□ -0.94
COL1A1-212ENST00000510710 PAM16Q9Y3D7 125 aa9.18□□□□□ -0.94
COL1A1-212ENST00000510710 A0A1W2PNN7 141 aa9.17□□□□□ -0.94
COL1A1-212ENST00000510710 LGALS3P17931 250 aaKnown RBP9.17□□□□□ -0.94
COL1A1-212ENST00000510710 CKS1BP61024 79 aa9.17□□□□□ -0.94
COL1A1-212ENST00000510710 RNF151Q2KHN1 245 aa9.17□□□□□ -0.94
COL1A1-212ENST00000510710 SPATA45Q537H7 98 aa9.17□□□□□ -0.94
COL1A1-212ENST00000510710 PCP2Q8IVA1 136 aa9.17□□□□□ -0.94
COL1A1-212ENST00000510710 TRBV30A0A0K0K1B3 111 aa9.16□□□□□ -0.94
COL1A1-212ENST00000510710 SFTA2Q6UW10 78 aa9.16□□□□□ -0.94
COL1A1-212ENST00000510710 MYMXA0A1B0GTQ4 84 aa9.15□□□□□ -0.94
COL1A1-212ENST00000510710 PSORS1C2Q9UIG4 136 aa9.15□□□□□ -0.94
COL1A1-212ENST00000510710 COX8AP10176 69 aa9.14□□□□□ -0.95
COL1A1-212ENST00000510710 HERV-K104P63124 156 aa9.14□□□□□ -0.95
COL1A1-212ENST00000510710 C9orf116Q5BN46 136 aaPredicted RBP9.14□□□□□ -0.95
COL1A1-212ENST00000510710 C1orf137Q5JT78 98 aa9.14□□□□□ -0.95
COL1A1-212ENST00000510710 A0A0J9YXY3 114 aa9.13□□□□□ -0.95
COL1A1-212ENST00000510710 ZNF815PA8K554 130 aa9.13□□□□□ -0.95
COL1A1-212ENST00000510710 TLX1NBP0CAT3 122 aa9.13□□□□□ -0.95
COL1A1-212ENST00000510710 RPL18AQ02543 176 aaKnown RBP9.13□□□□□ -0.95
COL1A1-212ENST00000510710 BOD1L2Q8IYS8 172 aa9.13□□□□□ -0.95
COL1A1-212ENST00000510710 DLEU1O43261 78 aa9.12□□□□□ -0.95
COL1A1-212ENST00000510710 TP73-AS1Q9UF72 201 aa9.12□□□□□ -0.95
COL1A1-212ENST00000510710 S100A12P80511 92 aa9.11□□□□□ -0.95
COL1A1-212ENST00000510710 PHF5AQ7RTV0 110 aaKnown RBP9.11□□□□□ -0.95
COL1A1-212ENST00000510710 LINC00518Q8N0U6 118 aa9.11□□□□□ -0.95
COL1A1-212ENST00000510710 C14orf144Q96I85 54 aa9.11□□□□□ -0.95
COL1A1-212ENST00000510710 ERG28Q9UKR5 140 aa9.11□□□□□ -0.95
COL1A1-212ENST00000510710 C12orf57Q99622 126 aa9.1□□□□□ -0.95
COL1A1-212ENST00000510710 LITAFQ99732 161 aa9.1□□□□□ -0.95
COL1A1-212ENST00000510710 COX17Q14061 63 aa9.09□□□□□ -0.95
COL1A1-212ENST00000510710 PRR26Q8N8Z3 221 aa9.09□□□□□ -0.95
COL1A1-212ENST00000510710 DIRC1Q969H9 104 aa9.09□□□□□ -0.95
COL1A1-212ENST00000510710 NDUFC2-KCTD14E9PQ53 114 aa9.08□□□□□ -0.96
COL1A1-212ENST00000510710 TIMM17BO60830 172 aa9.08□□□□□ -0.96
COL1A1-212ENST00000510710 SMIM13P0DJ93 91 aa9.08□□□□□ -0.96
COL1A1-212ENST00000510710 IGLV7-43P04211 117 aa9.07□□□□□ -0.96
COL1A1-212ENST00000510710 PFN2P35080 140 aa9.07□□□□□ -0.96
COL1A1-212ENST00000510710 MEIG1Q5JSS6 88 aa9.07□□□□□ -0.96
COL1A1-212ENST00000510710 ADAMTSL4-AS1Q5T5F5 129 aa9.07□□□□□ -0.96
COL1A1-212ENST00000510710 SLC25A34Q6PIV7 304 aa9.07□□□□□ -0.96
COL1A1-212ENST00000510710 LINC00587B1AMM8 73 aa9.06□□□□□ -0.96
COL1A1-212ENST00000510710 LPAP08519 4548 aa9.05□□□□□ -0.96
COL1A1-212ENST00000510710 A0A0U1RRA0 63 aa9.05□□□□□ -0.96
COL1A1-212ENST00000510710 LINC00158P58513 81 aa9.05□□□□□ -0.96
COL1A1-212ENST00000510710 C2orf91Q6ZV80 131 aa9.05□□□□□ -0.96
COL1A1-212ENST00000510710 SCGB1D4Q6XE38 83 aa9.04□□□□□ -0.96
COL1A1-212ENST00000510710 MIR7-3HGQ8N6C7 128 aa9.04□□□□□ -0.96
COL1A1-212ENST00000510710 HIGD1BQ9P298 99 aa9.04□□□□□ -0.96
COL1A1-212ENST00000510710 LOC107984156A0A0G2JMH3 177 aa9.03□□□□□ -0.96
COL1A1-212ENST00000510710 FAM168BA1KXE4 195 aa9.03□□□□□ -0.96
COL1A1-212ENST00000510710 H0Y9J4 135 aa9.03□□□□□ -0.96
COL1A1-212ENST00000510710 C9orf129Q5T035 196 aaKnown RBP9.03□□□□□ -0.96
COL1A1-212ENST00000510710 ARL17AQ8IVW1 177 aa9.03□□□□□ -0.96
COL1A1-212ENST00000510710 DAND5Q8N907 189 aa9.03□□□□□ -0.96
COL1A1-212ENST00000510710 SPANXDQ9BXN6 97 aa9.03□□□□□ -0.96
COL1A1-212ENST00000510710 PRO1933Q9H354 126 aa9.03□□□□□ -0.96
COL1A1-212ENST00000510710 SND1-IT1Q9HBX3 110 aa9.03□□□□□ -0.96
COL1A1-212ENST00000510710 SPANXB1Q9NS25 103 aaPredicted RBP9.03□□□□□ -0.96
COL1A1-212ENST00000510710 SPANXCQ9NY87 97 aa9.03□□□□□ -0.96
COL1A1-212ENST00000510710 UQCR10Q9UDW1 63 aa9.03□□□□□ -0.96
COL1A1-212ENST00000510710 GAGE2EQ4V326 116 aa9.02□□□□□ -0.97
COL1A1-212ENST00000510710 SOSTDC1Q6X4U4 206 aa9.02□□□□□ -0.97
COL1A1-212ENST00000510710 GAGE2DQ9UEU5 116 aa9.02□□□□□ -0.97
COL1A1-212ENST00000510710 IGLV1-50A0A075B6I6 118 aa9.01□□□□□ -0.97
COL1A1-212ENST00000510710 TMEM238C9JI98 176 aa9.01□□□□□ -0.97
COL1A1-212ENST00000510710 EIF4EBP3O60516 100 aaPredicted RBP9.01□□□□□ -0.97
COL1A1-212ENST00000510710 FAM19A5Q7Z5A7 132 aaPredicted RBP9.01□□□□□ -0.97
COL1A1-212ENST00000510710 KRTAP11-1Q8IUC1 163 aa9□□□□□ -0.97
COL1A1-212ENST00000510710 KRTAP7-1Q8IUC3 87 aa9□□□□□ -0.97
COL1A1-212ENST00000510710 MIEN1Q9BRT3 115 aa9□□□□□ -0.97
COL1A1-212ENST00000510710 XAGE1AQ9HD64 81 aa9□□□□□ -0.97
COL1A1-212ENST00000510710 PRR4Q16378 134 aa8.99□□□□□ -0.97
COL1A1-212ENST00000510710 Q6ZVH6 145 aa8.99□□□□□ -0.97
COL1A1-212ENST00000510710 Q8NDZ9 215 aa8.99□□□□□ -0.97
COL1A1-212ENST00000510710 PPDPFQ9H3Y8 114 aa8.99□□□□□ -0.97
COL1A1-212ENST00000510710 UBE2BP63146 152 aa8.98□□□□□ -0.97
COL1A1-212ENST00000510710 LINC00308Q8TCZ7 52 aa8.98□□□□□ -0.97
COL1A1-212ENST00000510710 IFITM1P13164 125 aa8.97□□□□□ -0.97
COL1A1-212ENST00000510710 M0QXV9 152 aa8.96□□□□□ -0.98
COL1A1-212ENST00000510710 KRTAP1-4P0C5Y4 121 aa8.96□□□□□ -0.98
COL1A1-212ENST00000510710 NPC2P61916 151 aa8.96□□□□□ -0.98
COL1A1-212ENST00000510710 MUSTN1Q8IVN3 82 aa8.96□□□□□ -0.98
COL1A1-212ENST00000510710 IGLV5-37A0A075B6J1 123 aa8.95□□□□□ -0.98
COL1A1-212ENST00000510710 TSTD3H0UI37 97 aa8.95□□□□□ -0.98
COL1A1-212ENST00000510710 VPREB1P12018 145 aa8.95□□□□□ -0.98
COL1A1-212ENST00000510710 RPL13AP40429 203 aaKnown RBP8.95□□□□□ -0.98
COL1A1-212ENST00000510710 TAL2Q16559 108 aa8.94□□□□□ -0.98
COL1A1-212ENST00000510710 NDUFC2O95298 119 aa8.93□□□□□ -0.98
COL1A1-212ENST00000510710 HIST1H4GQ99525 98 aa8.93□□□□□ -0.98
COL1A1-212ENST00000510710 A0A0U1RQV1 116 aa8.92□□□□□ -0.98
COL1A1-212ENST00000510710 HSD52Q0P140 79 aa8.91□□□□□ -0.98
COL1A1-212ENST00000510710 COPS9Q8WXC6 57 aa8.91□□□□□ -0.98
COL1A1-212ENST00000510710 IGKV2-28A0A075B6P5 120 aa8.9□□□□□ -0.98
COL1A1-212ENST00000510710 IGKV2D-28P01615 120 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms