RNA–Protein interactions for RNA: ENST00000510526.2

HMGB3P3-201, Transcript of high mobility group box 3 pseudogene 3, humanhuman

BASIC

Gene HMGB3P3, Length 400 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P3-201ENST00000510526 ARFGEF3Q5TH69 2177 aa1.44□□□□□ -2.18
HMGB3P3-201ENST00000510526 SSC5DA1L4H1 1573 aa1.43□□□□□ -2.18
HMGB3P3-201ENST00000510526 CACNA1DQ01668 2161 aa1.43□□□□□ -2.18
HMGB3P3-201ENST00000510526 SPTY2D1-AS1A0A0U1RR47 76 aa1.43□□□□□ -2.18
HMGB3P3-201ENST00000510526 ZNF861PO60384 105 aa1.43□□□□□ -2.18
HMGB3P3-201ENST00000510526 IGKV4-1P06312 121 aa1.43□□□□□ -2.18
HMGB3P3-201ENST00000510526 GIG44P09565 113 aaPredicted RBP1.43□□□□□ -2.18
HMGB3P3-201ENST00000510526 Q8N9L7 120 aa1.43□□□□□ -2.18
HMGB3P3-201ENST00000510526 TP53AIP1Q9HCN2 124 aa1.43□□□□□ -2.18
HMGB3P3-201ENST00000510526 ANAPC11Q9NYG5 84 aa1.43□□□□□ -2.18
HMGB3P3-201ENST00000510526 DNAJC13O75165 2243 aa1.43□□□□□ -2.18
HMGB3P3-201ENST00000510526 GOLGA4Q13439 2230 aaKnown RBP1.43□□□□□ -2.18
HMGB3P3-201ENST00000510526 COL5A1P20908 1838 aaPredicted RBP1.43□□□□□ -2.18
HMGB3P3-201ENST00000510526 MALRD1Q5VYJ5 2156 aa1.42□□□□□ -2.18
HMGB3P3-201ENST00000510526 CR1P17927 2039 aa1.42□□□□□ -2.18
HMGB3P3-201ENST00000510526 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.42□□□□□ -2.18
HMGB3P3-201ENST00000510526 A0A0G2JQZ4 141 aa1.42□□□□□ -2.18
HMGB3P3-201ENST00000510526 IGKV2-29A2NJV5 120 aaPredicted RBP1.42□□□□□ -2.18
HMGB3P3-201ENST00000510526 LINC00158P58513 81 aa1.42□□□□□ -2.18
HMGB3P3-201ENST00000510526 C10orf55Q5SWW7 151 aa1.42□□□□□ -2.18
HMGB3P3-201ENST00000510526 R4GN34 69 aa1.42□□□□□ -2.18
HMGB3P3-201ENST00000510526 IGLV4-60A0A075B6I1 120 aa1.41□□□□□ -2.18
HMGB3P3-201ENST00000510526 ANGP03950 147 aaKnown RBP1.41□□□□□ -2.18
HMGB3P3-201ENST00000510526 DEFB134Q4QY38 66 aa1.41□□□□□ -2.18
HMGB3P3-201ENST00000510526 PP632Q6XCG6 107 aa1.41□□□□□ -2.18
HMGB3P3-201ENST00000510526 C5orf56Q8N8D9 126 aa1.41□□□□□ -2.18
HMGB3P3-201ENST00000510526 SMIM11BQ8TCY0 68 aa1.41□□□□□ -2.18
HMGB3P3-201ENST00000510526 TNCP24821 2201 aa1.41□□□□□ -2.18
HMGB3P3-201ENST00000510526 MED12Q93074 2177 aa1.41□□□□□ -2.18
HMGB3P3-201ENST00000510526 ZNF831Q5JPB2 1677 aa1.4□□□□□ -2.19
HMGB3P3-201ENST00000510526 TNRC6CQ9HCJ0 1690 aaKnown RBP1.4□□□□□ -2.19
HMGB3P3-201ENST00000510526 A0A087WTM6 91 aa1.4□□□□□ -2.19
HMGB3P3-201ENST00000510526 NBDYA0A0U1RRE5 68 aa1.4□□□□□ -2.19
HMGB3P3-201ENST00000510526 PRCDQ00LT1 54 aa1.4□□□□□ -2.19
HMGB3P3-201ENST00000510526 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.4□□□□□ -2.19
HMGB3P3-201ENST00000510526 KRTAP11-1Q8IUC1 163 aa1.4□□□□□ -2.19
HMGB3P3-201ENST00000510526 Q8IZM0 81 aa1.4□□□□□ -2.19
HMGB3P3-201ENST00000510526 CCL26Q9Y258 94 aa1.4□□□□□ -2.19
HMGB3P3-201ENST00000510526 MUC19Q7Z5P9 8384 aa1.4□□□□□ -2.19
HMGB3P3-201ENST00000510526 LINC00959A0A1B0GUT2 108 aa1.39□□□□□ -2.19
HMGB3P3-201ENST00000510526 INE1O15225 51 aa1.39□□□□□ -2.19
HMGB3P3-201ENST00000510526 LY6G6CO95867 125 aa1.39□□□□□ -2.19
HMGB3P3-201ENST00000510526 PRB2P02812 416 aaPredicted RBP1.39□□□□□ -2.19
HMGB3P3-201ENST00000510526 CCL19Q99731 98 aa1.39□□□□□ -2.19
HMGB3P3-201ENST00000510526 KMT2BQ9UMN6 2715 aaPredicted RBP1.38□□□□□ -2.19
HMGB3P3-201ENST00000510526 CEP192Q8TEP8 1941 aa1.38□□□□□ -2.19
HMGB3P3-201ENST00000510526 FREM1Q5H8C1 2179 aa1.38□□□□□ -2.19
HMGB3P3-201ENST00000510526 H3BRN7 92 aa1.38□□□□□ -2.19
HMGB3P3-201ENST00000510526 H3BSH0 61 aa1.38□□□□□ -2.19
HMGB3P3-201ENST00000510526 M0R2N4 97 aa1.38□□□□□ -2.19
HMGB3P3-201ENST00000510526 IGLV6-57P01721 117 aa1.38□□□□□ -2.19
HMGB3P3-201ENST00000510526 POLR2KP53803 58 aaKnown RBP1.38□□□□□ -2.19
HMGB3P3-201ENST00000510526 LINC00575Q6W349 94 aa1.38□□□□□ -2.19
HMGB3P3-201ENST00000510526 COX6B2Q6YFQ2 88 aa1.38□□□□□ -2.19
HMGB3P3-201ENST00000510526 SSBP3-AS1Q7Z2R9 100 aa1.38□□□□□ -2.19
HMGB3P3-201ENST00000510526 DEFB106AQ8N104 65 aa1.38□□□□□ -2.19
HMGB3P3-201ENST00000510526 Q96NJ1 140 aa1.38□□□□□ -2.19
HMGB3P3-201ENST00000510526 LINC00472Q9H8W2 130 aa1.38□□□□□ -2.19
HMGB3P3-201ENST00000510526 DOCK10Q96BY6 2186 aa1.38□□□□□ -2.19
HMGB3P3-201ENST00000510526 ESPL1Q14674 2120 aa1.37□□□□□ -2.19
HMGB3P3-201ENST00000510526 NUP214P35658 2090 aaPredicted RBP1.37□□□□□ -2.19
HMGB3P3-201ENST00000510526 IGKV2D-24A0A075B6R9 120 aa1.37□□□□□ -2.19
HMGB3P3-201ENST00000510526 SPINK13Q1W4C9 94 aa1.37□□□□□ -2.19
HMGB3P3-201ENST00000510526 PIGYQ3MUY2 71 aa1.37□□□□□ -2.19
HMGB3P3-201ENST00000510526 USMG5Q96IX5 58 aa1.37□□□□□ -2.19
HMGB3P3-201ENST00000510526 CRIPTQ9P021 101 aa1.37□□□□□ -2.19
HMGB3P3-201ENST00000510526 ABCA4P78363 2273 aa1.36□□□□□ -2.19
HMGB3P3-201ENST00000510526 LYNX1G3V0Z9 82 aa1.36□□□□□ -2.19
HMGB3P3-201ENST00000510526 CCL22O00626 93 aa1.36□□□□□ -2.19
HMGB3P3-201ENST00000510526 HRES1P13985 223 aa1.36□□□□□ -2.19
HMGB3P3-201ENST00000510526 CRIP1P50238 77 aa1.36□□□□□ -2.19
HMGB3P3-201ENST00000510526 MINOS1Q5TGZ0 78 aa1.36□□□□□ -2.19
HMGB3P3-201ENST00000510526 C10orf99Q6UWK7 81 aa1.36□□□□□ -2.19
HMGB3P3-201ENST00000510526 ALPK2Q86TB3 2170 aa1.36□□□□□ -2.19
HMGB3P3-201ENST00000510526 PLAC4Q8WY50 150 aa1.36□□□□□ -2.19
HMGB3P3-201ENST00000510526 CDKN2A-AS1Q9UH64 79 aa1.36□□□□□ -2.19
HMGB3P3-201ENST00000510526 SDK1Q7Z5N4 2213 aa1.35□□□□□ -2.19
HMGB3P3-201ENST00000510526 IGKV2-24A0A0C4DH68 120 aa1.35□□□□□ -2.19
HMGB3P3-201ENST00000510526 Q6ZRX8 168 aa1.35□□□□□ -2.19
HMGB3P3-201ENST00000510526 C6orf48Q9UBA6 75 aa1.35□□□□□ -2.19
HMGB3P3-201ENST00000510526 PDE4DIPQ5VU43 2346 aa1.35□□□□□ -2.19
HMGB3P3-201ENST00000510526 MED13LQ71F56 2210 aa1.35□□□□□ -2.19
HMGB3P3-201ENST00000510526 UNC13CQ8NB66 2214 aa1.34□□□□□ -2.19
HMGB3P3-201ENST00000510526 IGKV2-28A0A075B6P5 120 aa1.34□□□□□ -2.19
HMGB3P3-201ENST00000510526 IGKV2D-28P01615 120 aa1.34□□□□□ -2.19
HMGB3P3-201ENST00000510526 RPS27P42677 84 aaKnown RBP1.34□□□□□ -2.19
HMGB3P3-201ENST00000510526 SPINK9Q5DT21 86 aa1.34□□□□□ -2.19
HMGB3P3-201ENST00000510526 LINC00304Q8N9R0 145 aa1.34□□□□□ -2.19
HMGB3P3-201ENST00000510526 SEC16AO15027 2179 aa1.34□□□□□ -2.2
HMGB3P3-201ENST00000510526 RP1P56715 2156 aa1.34□□□□□ -2.2
HMGB3P3-201ENST00000510526 BRWD1Q9NSI6 2320 aa1.33□□□□□ -2.2
HMGB3P3-201ENST00000510526 IGLV5-48A0A075B6I7 105 aa1.33□□□□□ -2.2
HMGB3P3-201ENST00000510526 K7EQZ3 153 aa1.33□□□□□ -2.2
HMGB3P3-201ENST00000510526 PRB1P04280 392 aa1.33□□□□□ -2.2
HMGB3P3-201ENST00000510526 DEFB131AP59861 70 aa1.33□□□□□ -2.2
HMGB3P3-201ENST00000510526 RPL39P62891 51 aaKnown RBP1.33□□□□□ -2.2
HMGB3P3-201ENST00000510526 KRTAP5-7Q6L8G8 165 aa1.33□□□□□ -2.2
HMGB3P3-201ENST00000510526 UBE2DNLQ8IWF7 75 aa1.33□□□□□ -2.2
HMGB3P3-201ENST00000510526 TMEM167AQ8TBQ9 72 aa1.33□□□□□ -2.2
HMGB3P3-201ENST00000510526 RPL39LQ96EH5 51 aaKnown RBP1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms