RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-208ENST00000509165 PMVKQ15126 192 aa2.29□□□□□ -2.04
NFKB1-208ENST00000509165 MRPL23Q16540 153 aaKnown RBP2.29□□□□□ -2.04
NFKB1-208ENST00000509165 ESRGQ1W209 222 aa2.29□□□□□ -2.04
NFKB1-208ENST00000509165 LINC01620Q4KN68 170 aa2.29□□□□□ -2.04
NFKB1-208ENST00000509165 Q6ZN92 141 aa2.29□□□□□ -2.04
NFKB1-208ENST00000509165 NTM-AS1Q6ZSK4 140 aa2.29□□□□□ -2.04
NFKB1-208ENST00000509165 FAM19A3Q7Z5A8 133 aa2.29□□□□□ -2.04
NFKB1-208ENST00000509165 ZNF664Q8N3J9 261 aa2.29□□□□□ -2.04
NFKB1-208ENST00000509165 AMELXQ99217 191 aa2.29□□□□□ -2.04
NFKB1-208ENST00000509165 CHCHD7Q9BUK0 85 aa2.29□□□□□ -2.04
NFKB1-208ENST00000509165 VAMP8Q9BV40 100 aa2.29□□□□□ -2.04
NFKB1-208ENST00000509165 CST9LQ9H4G1 147 aa2.29□□□□□ -2.04
NFKB1-208ENST00000509165 UBE2D4Q9Y2X8 147 aa2.29□□□□□ -2.04
NFKB1-208ENST00000509165 TRBV25-1A0A075B6N4 114 aa2.28□□□□□ -2.04
NFKB1-208ENST00000509165 TINCRA0A1B0GVN0 87 aa2.28□□□□□ -2.04
NFKB1-208ENST00000509165 TSTD3H0UI37 97 aa2.28□□□□□ -2.04
NFKB1-208ENST00000509165 K7EP13 123 aa2.28□□□□□ -2.04
NFKB1-208ENST00000509165 CCL25O15444 150 aa2.28□□□□□ -2.04
NFKB1-208ENST00000509165 DLEU1O43261 78 aa2.28□□□□□ -2.04
NFKB1-208ENST00000509165 DPM2O94777 84 aa2.28□□□□□ -2.04
NFKB1-208ENST00000509165 IGKCP01834 107 aa2.28□□□□□ -2.04
NFKB1-208ENST00000509165 RPL39P62891 51 aaKnown RBP2.28□□□□□ -2.04
NFKB1-208ENST00000509165 LYPD5Q6UWN5 251 aa2.28□□□□□ -2.04
NFKB1-208ENST00000509165 NEGR1Q7Z3B1 354 aa2.28□□□□□ -2.04
NFKB1-208ENST00000509165 ATP6V0E2Q8NHE4 81 aa2.28□□□□□ -2.04
NFKB1-208ENST00000509165 BAALCQ8WXS3 180 aa2.28□□□□□ -2.04
NFKB1-208ENST00000509165 MIEN1Q9BRT3 115 aa2.28□□□□□ -2.04
NFKB1-208ENST00000509165 VCX2Q9H322 139 aa2.28□□□□□ -2.04
NFKB1-208ENST00000509165 CDC42SE2Q9NRR3 84 aa2.28□□□□□ -2.04
NFKB1-208ENST00000509165 MRPL35Q9NZE8 188 aaKnown RBP2.28□□□□□ -2.04
NFKB1-208ENST00000509165 ICOSQ9Y6W8 199 aa2.28□□□□□ -2.04
NFKB1-208ENST00000509165 LPAP08519 4548 aa2.27□□□□□ -2.05
NFKB1-208ENST00000509165 NBDYA0A0U1RRE5 68 aa2.27□□□□□ -2.05
NFKB1-208ENST00000509165 HSBP1L1C9JCN9 74 aa2.27□□□□□ -2.05
NFKB1-208ENST00000509165 SIVA1O15304 175 aa2.27□□□□□ -2.05
NFKB1-208ENST00000509165 IGLC3P0DOY3 106 aa2.27□□□□□ -2.05
NFKB1-208ENST00000509165 FGF6P10767 208 aa2.27□□□□□ -2.05
NFKB1-208ENST00000509165 HTN3P15516 51 aa2.27□□□□□ -2.05
NFKB1-208ENST00000509165 SEC11AP67812 179 aa2.27□□□□□ -2.05
NFKB1-208ENST00000509165 LINC01556Q5JQF7 62 aa2.27□□□□□ -2.05
NFKB1-208ENST00000509165 C1orf134Q5TEV5 83 aa2.27□□□□□ -2.05
NFKB1-208ENST00000509165 NKAPP1Q8N9T2 125 aa2.27□□□□□ -2.05
NFKB1-208ENST00000509165 CHCHD10Q8WYQ3 142 aaPredicted RBP2.27□□□□□ -2.05
NFKB1-208ENST00000509165 HIST1H4GQ99525 98 aa2.27□□□□□ -2.05
NFKB1-208ENST00000509165 PMCHL2Q9BQD1 86 aa2.27□□□□□ -2.05
NFKB1-208ENST00000509165 TMEM243Q9BU79 118 aa2.27□□□□□ -2.05
NFKB1-208ENST00000509165 CHTOPQ9Y3Y2 248 aaKnown RBP2.27□□□□□ -2.05
NFKB1-208ENST00000509165 A0A0J9YY99 117 aa2.26□□□□□ -2.05
NFKB1-208ENST00000509165 C11orf86A6NJI1 115 aa2.26□□□□□ -2.05
NFKB1-208ENST00000509165 H0Y8G0 127 aa2.26□□□□□ -2.05
NFKB1-208ENST00000509165 COX8AP10176 69 aa2.26□□□□□ -2.05
NFKB1-208ENST00000509165 DDTP30046 118 aa2.26□□□□□ -2.05
NFKB1-208ENST00000509165 UBE2D1P51668 147 aa2.26□□□□□ -2.05
NFKB1-208ENST00000509165 CCL18P55774 89 aa2.26□□□□□ -2.05
NFKB1-208ENST00000509165 HERVK_113P63121 156 aa2.26□□□□□ -2.05
NFKB1-208ENST00000509165 MAJINQ3KP22 176 aa2.26□□□□□ -2.05
NFKB1-208ENST00000509165 SPATA45Q537H7 98 aa2.26□□□□□ -2.05
NFKB1-208ENST00000509165 TTC32Q5I0X7 151 aa2.26□□□□□ -2.05
NFKB1-208ENST00000509165 AMMECR1LQ6DCA0 310 aa2.26□□□□□ -2.05
NFKB1-208ENST00000509165 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
NFKB1-208ENST00000509165 WFDC10BQ8IUB3 73 aa2.26□□□□□ -2.05
NFKB1-208ENST00000509165 BOD1L2Q8IYS8 172 aa2.26□□□□□ -2.05
NFKB1-208ENST00000509165 ATOH7Q8N100 152 aa2.26□□□□□ -2.05
NFKB1-208ENST00000509165 OR5A1Q8NGJ0 315 aa2.26□□□□□ -2.05
NFKB1-208ENST00000509165 C2orf88Q9BSF0 95 aa2.26□□□□□ -2.05
NFKB1-208ENST00000509165 UQCR10Q9UDW1 63 aa2.26□□□□□ -2.05
NFKB1-208ENST00000509165 DNAH8Q96JB1 4490 aa2.26□□□□□ -2.05
NFKB1-208ENST00000509165 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.25□□□□□ -2.05
NFKB1-208ENST00000509165 TMEM223A0PJW6 202 aa2.25□□□□□ -2.05
NFKB1-208ENST00000509165 IGKV2-29A2NJV5 120 aaPredicted RBP2.25□□□□□ -2.05
NFKB1-208ENST00000509165 IBA57-AS1B1ANH7 110 aa2.25□□□□□ -2.05
NFKB1-208ENST00000509165 UBE2L6O14933 153 aa2.25□□□□□ -2.05
NFKB1-208ENST00000509165 ZNF22P17026 224 aaPredicted RBP2.25□□□□□ -2.05
NFKB1-208ENST00000509165 KRTAP26-1Q6PEX3 210 aa2.25□□□□□ -2.05
NFKB1-208ENST00000509165 SLC25A34Q6PIV7 304 aa2.25□□□□□ -2.05
NFKB1-208ENST00000509165 C14orf144Q96I85 54 aa2.25□□□□□ -2.05
NFKB1-208ENST00000509165 HIGD1BQ9P298 99 aa2.25□□□□□ -2.05
NFKB1-208ENST00000509165 IGKV2D-26A0A0A0MRZ7 120 aa2.24□□□□□ -2.05
NFKB1-208ENST00000509165 TRAV8-4A0A0B4J246 113 aa2.24□□□□□ -2.05
NFKB1-208ENST00000509165 TRAV8-6A0A0B4J262 113 aa2.24□□□□□ -2.05
NFKB1-208ENST00000509165 IGHV3OR16-9A0A0B4J2B5 98 aa2.24□□□□□ -2.05
NFKB1-208ENST00000509165 IGHV1-58A0A0C4DH39 117 aa2.24□□□□□ -2.05
NFKB1-208ENST00000509165 A0A0J9YXV3 536 aa2.24□□□□□ -2.05
NFKB1-208ENST00000509165 H3BRM9 83 aa2.24□□□□□ -2.05
NFKB1-208ENST00000509165 MT1HL1P0DM35 61 aa2.24□□□□□ -2.05
NFKB1-208ENST00000509165 NMUP48645 174 aa2.24□□□□□ -2.05
NFKB1-208ENST00000509165 RBX1P62877 108 aa2.24□□□□□ -2.05
NFKB1-208ENST00000509165 SFTA2Q6UW10 78 aa2.24□□□□□ -2.05
NFKB1-208ENST00000509165 Q6ZUT4 128 aa2.24□□□□□ -2.05
NFKB1-208ENST00000509165 CAMK2N1Q7Z7J9 78 aa2.24□□□□□ -2.05
NFKB1-208ENST00000509165 C6orf223Q8N319 242 aa2.24□□□□□ -2.05
NFKB1-208ENST00000509165 DEFB104AQ8WTQ1 72 aa2.24□□□□□ -2.05
NFKB1-208ENST00000509165 CHAC1Q9BUX1 264 aa2.24□□□□□ -2.05
NFKB1-208ENST00000509165 PRO1933Q9H354 126 aa2.24□□□□□ -2.05
NFKB1-208ENST00000509165 GEMIN7Q9H840 131 aaKnown RBP2.24□□□□□ -2.05
NFKB1-208ENST00000509165 CDKN2A-AS1Q9UH64 79 aa2.24□□□□□ -2.05
NFKB1-208ENST00000509165 MYMXA0A1B0GTQ4 84 aa2.23□□□□□ -2.05
NFKB1-208ENST00000509165 LINC00959A0A1B0GUT2 108 aa2.23□□□□□ -2.05
NFKB1-208ENST00000509165 PCP4L1A6NKN8 68 aa2.23□□□□□ -2.05
NFKB1-208ENST00000509165 LINC00587B1AMM8 73 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms