RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 FAM19A1Q7Z5A9 133 aa9.13□□□□□ -0.95
CXCL1-202ENST00000509101 IGLV5-45A0A087WSX0 123 aa9.12□□□□□ -0.95
CXCL1-202ENST00000509101 COLCA2A8K830 154 aa9.12□□□□□ -0.95
CXCL1-202ENST00000509101 NDUFA6P56556 154 aa9.12□□□□□ -0.95
CXCL1-202ENST00000509101 TMEM238C9JI98 176 aa9.11□□□□□ -0.95
CXCL1-202ENST00000509101 FSIP2Q5CZC0 6907 aa9.11□□□□□ -0.95
CXCL1-202ENST00000509101 SPINK8P0C7L1 97 aa9.1□□□□□ -0.95
CXCL1-202ENST00000509101 CHCHD1Q96BP2 118 aaKnown RBP9.1□□□□□ -0.95
CXCL1-202ENST00000509101 TMEM126AQ9H061 195 aa9.1□□□□□ -0.95
CXCL1-202ENST00000509101 CRCT1Q9UGL9 99 aa9.1□□□□□ -0.95
CXCL1-202ENST00000509101 IGLC3P0DOY3 106 aa9.09□□□□□ -0.95
CXCL1-202ENST00000509101 LINC00337Q8N6G1 96 aa9.09□□□□□ -0.95
CXCL1-202ENST00000509101 ATP5LO75964 103 aa9.08□□□□□ -0.96
CXCL1-202ENST00000509101 LINC00310P59036 64 aa9.08□□□□□ -0.96
CXCL1-202ENST00000509101 ASB16-AS1Q495Z4 193 aa9.08□□□□□ -0.96
CXCL1-202ENST00000509101 FP248Q71RG6 208 aaPredicted RBP9.08□□□□□ -0.96
CXCL1-202ENST00000509101 BAGE3Q86Y29 109 aa9.08□□□□□ -0.96
CXCL1-202ENST00000509101 FAM19A2Q8N3H0 131 aa9.08□□□□□ -0.96
CXCL1-202ENST00000509101 PLEKHB2Q96CS7 222 aa9.08□□□□□ -0.96
CXCL1-202ENST00000509101 KRTAP4-1Q9BYQ7 146 aa9.08□□□□□ -0.96
CXCL1-202ENST00000509101 ZNF22P17026 224 aaPredicted RBP9.07□□□□□ -0.96
CXCL1-202ENST00000509101 KRTAP13-3Q3SY46 172 aa9.07□□□□□ -0.96
CXCL1-202ENST00000509101 SPAG11AQ6PDA7 123 aa9.07□□□□□ -0.96
CXCL1-202ENST00000509101 M0R378 163 aa9.06□□□□□ -0.96
CXCL1-202ENST00000509101 VPREB1P12018 145 aa9.06□□□□□ -0.96
CXCL1-202ENST00000509101 PFN2P35080 140 aa9.06□□□□□ -0.96
CXCL1-202ENST00000509101 C11orf86A6NJI1 115 aa9.05□□□□□ -0.96
CXCL1-202ENST00000509101 SERF1AO75920 110 aa9.05□□□□□ -0.96
CXCL1-202ENST00000509101 HIGD2AQ9BW72 106 aa9.05□□□□□ -0.96
CXCL1-202ENST00000509101 HSBP1O75506 76 aa9.04□□□□□ -0.96
CXCL1-202ENST00000509101 IFI27L1Q96BM0 104 aa9.04□□□□□ -0.96
CXCL1-202ENST00000509101 CHTOPQ9Y3Y2 248 aaKnown RBP9.04□□□□□ -0.96
CXCL1-202ENST00000509101 IGLV5-39A0A0G2JS06 123 aa9.03□□□□□ -0.96
CXCL1-202ENST00000509101 H3BRM9 83 aa9.03□□□□□ -0.96
CXCL1-202ENST00000509101 C4orf48Q5BLP8 95 aa9.03□□□□□ -0.96
CXCL1-202ENST00000509101 SPRR4Q96PI1 79 aa9.02□□□□□ -0.97
CXCL1-202ENST00000509101 SND1-IT1Q9HBX3 110 aa9.02□□□□□ -0.97
CXCL1-202ENST00000509101 TRAV12-1A0A0B4J245 112 aa9.01□□□□□ -0.97
CXCL1-202ENST00000509101 SEC61BP60468 96 aaKnown RBP9.01□□□□□ -0.97
CXCL1-202ENST00000509101 DAND5Q8N907 189 aa9.01□□□□□ -0.97
CXCL1-202ENST00000509101 Q8NDZ9 215 aa9.01□□□□□ -0.97
CXCL1-202ENST00000509101 RPL24P83731 157 aaKnown RBP9□□□□□ -0.97
CXCL1-202ENST00000509101 TMEM170BQ5T4T1 132 aa9□□□□□ -0.97
CXCL1-202ENST00000509101 Q8NBF4 154 aa9□□□□□ -0.97
CXCL1-202ENST00000509101 ERG28Q9UKR5 140 aa8.99□□□□□ -0.97
CXCL1-202ENST00000509101 LEPROTL1O95214 131 aa8.98□□□□□ -0.97
CXCL1-202ENST00000509101 TMEM223A0PJW6 202 aa8.97□□□□□ -0.97
CXCL1-202ENST00000509101 H0Y8G0 127 aa8.97□□□□□ -0.97
CXCL1-202ENST00000509101 FABP4P15090 132 aa8.97□□□□□ -0.97
CXCL1-202ENST00000509101 ZNF706Q9Y5V0 76 aaPredicted RBP8.97□□□□□ -0.97
CXCL1-202ENST00000509101 HIST1H2BKO60814 126 aa8.96□□□□□ -0.98
CXCL1-202ENST00000509101 HIST1H2BJP06899 126 aa8.96□□□□□ -0.98
CXCL1-202ENST00000509101 HIST1H2BOP23527 126 aa8.96□□□□□ -0.98
CXCL1-202ENST00000509101 HIST1H2BBP33778 126 aa8.96□□□□□ -0.98
CXCL1-202ENST00000509101 HIST1H2BDP58876 126 aa8.96□□□□□ -0.98
CXCL1-202ENST00000509101 HIST1H2BCP62807 126 aa8.96□□□□□ -0.98
CXCL1-202ENST00000509101 HIST2H2BEQ16778 126 aa8.96□□□□□ -0.98
CXCL1-202ENST00000509101 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.96□□□□□ -0.98
CXCL1-202ENST00000509101 HIST1H2BHQ93079 126 aa8.96□□□□□ -0.98
CXCL1-202ENST00000509101 ZNF625Q96I27 306 aaPredicted RBP8.96□□□□□ -0.98
CXCL1-202ENST00000509101 HIST1H2BNQ99877 126 aa8.96□□□□□ -0.98
CXCL1-202ENST00000509101 HIST1H2BMQ99879 126 aa8.96□□□□□ -0.98
CXCL1-202ENST00000509101 SPINK1P00995 79 aa8.93□□□□□ -0.98
CXCL1-202ENST00000509101 COX17Q14061 63 aa8.93□□□□□ -0.98
CXCL1-202ENST00000509101 NDUFA12Q9UI09 145 aa8.93□□□□□ -0.98
CXCL1-202ENST00000509101 PMCHL2Q9BQD1 86 aa8.92□□□□□ -0.98
CXCL1-202ENST00000509101 HSPB8Q9UJY1 196 aa8.92□□□□□ -0.98
CXCL1-202ENST00000509101 LCE2CQ5TA81 110 aa8.9□□□□□ -0.98
CXCL1-202ENST00000509101 A0A0U1RRA0 63 aa8.88□□□□□ -0.99
CXCL1-202ENST00000509101 PRYO14603 147 aa8.88□□□□□ -0.99
CXCL1-202ENST00000509101 TSPEAR-AS2P59090 65 aa8.88□□□□□ -0.99
CXCL1-202ENST00000509101 XP32Q5T750 250 aa8.88□□□□□ -0.99
CXCL1-202ENST00000509101 Q8N377 158 aa8.88□□□□□ -0.99
CXCL1-202ENST00000509101 SMCR5Q8TEV8 140 aa8.88□□□□□ -0.99
CXCL1-202ENST00000509101 DPM2O94777 84 aa8.87□□□□□ -0.99
CXCL1-202ENST00000509101 MOBPQ13875 183 aa8.87□□□□□ -0.99
CXCL1-202ENST00000509101 MAP1LC3CQ9BXW4 147 aa8.87□□□□□ -0.99
CXCL1-202ENST00000509101 IGLV9-49A0A0B4J1Y8 123 aa8.86□□□□□ -0.99
CXCL1-202ENST00000509101 PLNP26678 52 aa8.86□□□□□ -0.99
CXCL1-202ENST00000509101 LINC00158P58513 81 aa8.86□□□□□ -0.99
CXCL1-202ENST00000509101 SFTA2Q6UW10 78 aa8.86□□□□□ -0.99
CXCL1-202ENST00000509101 NCR3O14931 201 aa8.85□□□□□ -0.99
CXCL1-202ENST00000509101 IGKCP01834 107 aa8.85□□□□□ -0.99
CXCL1-202ENST00000509101 SMIM13P0DJ93 91 aa8.85□□□□□ -0.99
CXCL1-202ENST00000509101 LINC00483Q53H64 154 aa8.85□□□□□ -0.99
CXCL1-202ENST00000509101 ETDCA0A1B0GVM5 59 aa8.84□□□□□ -0.99
CXCL1-202ENST00000509101 SYS1-DBNDD2H3BUS1 97 aa8.84□□□□□ -0.99
CXCL1-202ENST00000509101 LEPROTO15243 131 aa8.84□□□□□ -0.99
CXCL1-202ENST00000509101 ATP6V1G1O75348 118 aa8.84□□□□□ -0.99
CXCL1-202ENST00000509101 RPS29P62273 56 aaKnown RBP8.84□□□□□ -0.99
CXCL1-202ENST00000509101 MT1HP80294 61 aa8.84□□□□□ -0.99
CXCL1-202ENST00000509101 KRTAP19-2Q3LHN2 52 aa8.84□□□□□ -0.99
CXCL1-202ENST00000509101 COA6Q5JTJ3 125 aaKnown RBP8.84□□□□□ -0.99
CXCL1-202ENST00000509101 GAGE2AQ6NT46 116 aa8.84□□□□□ -0.99
CXCL1-202ENST00000509101 SPRR1AP35321 89 aa8.83□□□□□ -1
CXCL1-202ENST00000509101 KRTAP4-16G5E9R7 235 aaPredicted RBP8.82□□□□□ -1
CXCL1-202ENST00000509101 SLC25A20O43772 301 aa8.82□□□□□ -1
CXCL1-202ENST00000509101 S100A1P23297 94 aa8.82□□□□□ -1
CXCL1-202ENST00000509101 MEIG1Q5JSS6 88 aa8.82□□□□□ -1
CXCL1-202ENST00000509101 J3QQQ9 107 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms