RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 LOC107984156A0A0G2JMH3 177 aa6.7□□□□□ -1.34
RFC1-211ENST00000509084 CTAG1AP78358 180 aa6.7□□□□□ -1.34
RFC1-211ENST00000509084 ARL17AQ8IVW1 177 aa6.7□□□□□ -1.34
RFC1-211ENST00000509084 DAND5Q8N907 189 aa6.7□□□□□ -1.34
RFC1-211ENST00000509084 SND1-IT1Q9HBX3 110 aa6.7□□□□□ -1.34
RFC1-211ENST00000509084 DNAH2Q9P225 4427 aa6.69□□□□□ -1.34
RFC1-211ENST00000509084 PCP4L1A6NKN8 68 aa6.69□□□□□ -1.34
RFC1-211ENST00000509084 C16orf90A8MZG2 172 aa6.69□□□□□ -1.34
RFC1-211ENST00000509084 Q6ZRP5 223 aa6.69□□□□□ -1.34
RFC1-211ENST00000509084 MUSTN1Q8IVN3 82 aa6.69□□□□□ -1.34
RFC1-211ENST00000509084 KRTAP4-12Q9BQ66 201 aa6.69□□□□□ -1.34
RFC1-211ENST00000509084 LINC00474Q9P2X8 69 aa6.69□□□□□ -1.34
RFC1-211ENST00000509084 DNAH17Q9UFH2 4485 aa6.68□□□□□ -1.34
RFC1-211ENST00000509084 NDUFC2O95298 119 aa6.68□□□□□ -1.34
RFC1-211ENST00000509084 GAGE2BQ13066 116 aa6.68□□□□□ -1.34
RFC1-211ENST00000509084 GAGE2EQ4V326 116 aa6.68□□□□□ -1.34
RFC1-211ENST00000509084 GAGE2DQ9UEU5 116 aa6.68□□□□□ -1.34
RFC1-211ENST00000509084 NPC2P61916 151 aa6.67□□□□□ -1.34
RFC1-211ENST00000509084 SOSTDC1Q6X4U4 206 aa6.67□□□□□ -1.34
RFC1-211ENST00000509084 SDIM1Q6ZPB5 146 aa6.67□□□□□ -1.34
RFC1-211ENST00000509084 XAGE1AQ9HD64 81 aa6.67□□□□□ -1.34
RFC1-211ENST00000509084 PLA2G2DQ9UNK4 145 aa6.67□□□□□ -1.34
RFC1-211ENST00000509084 KMT2CQ8NEZ4 4911 aaKnown RBP6.67□□□□□ -1.34
RFC1-211ENST00000509084 RYR2Q92736 4967 aa6.66□□□□□ -1.34
RFC1-211ENST00000509084 A0A096LNI7 61 aa6.66□□□□□ -1.34
RFC1-211ENST00000509084 BVES-AS1Q5T3Y7 98 aa6.66□□□□□ -1.34
RFC1-211ENST00000509084 A4D1N5 150 aa6.65□□□□□ -1.34
RFC1-211ENST00000509084 A6NDN8 102 aa6.65□□□□□ -1.34
RFC1-211ENST00000509084 HINT1P49773 126 aaPredicted RBP6.65□□□□□ -1.34
RFC1-211ENST00000509084 FXYD2P54710 66 aa6.65□□□□□ -1.34
RFC1-211ENST00000509084 KRTAP10-2P60368 255 aa6.65□□□□□ -1.34
RFC1-211ENST00000509084 C9orf129Q5T035 196 aaKnown RBP6.65□□□□□ -1.34
RFC1-211ENST00000509084 IGKV2-24A0A0C4DH68 120 aa6.64□□□□□ -1.35
RFC1-211ENST00000509084 TRBV10-2A0A0K0K1G8 114 aa6.64□□□□□ -1.35
RFC1-211ENST00000509084 H3BS24 57 aa6.64□□□□□ -1.35
RFC1-211ENST00000509084 LCE3BQ5TA77 95 aa6.64□□□□□ -1.35
RFC1-211ENST00000509084 FRAS1Q86XX4 4008 aa6.64□□□□□ -1.35
RFC1-211ENST00000509084 IGLV5-37A0A075B6J1 123 aa6.63□□□□□ -1.35
RFC1-211ENST00000509084 TRAV13-2A0A0B4J235 113 aa6.63□□□□□ -1.35
RFC1-211ENST00000509084 A0A0B4J2C4 111 aa6.63□□□□□ -1.35
RFC1-211ENST00000509084 A0A1B0GVY2 172 aa6.63□□□□□ -1.35
RFC1-211ENST00000509084 LINC01620Q4KN68 170 aa6.63□□□□□ -1.35
RFC1-211ENST00000509084 NKAPP1Q8N9T2 125 aa6.63□□□□□ -1.35
RFC1-211ENST00000509084 SPACA4Q8TDM5 124 aa6.63□□□□□ -1.35
RFC1-211ENST00000509084 RAB37Q96AX2 223 aa6.63□□□□□ -1.35
RFC1-211ENST00000509084 NHP2Q9NX24 153 aaKnown RBP6.63□□□□□ -1.35
RFC1-211ENST00000509084 VPREB1P12018 145 aa6.62□□□□□ -1.35
RFC1-211ENST00000509084 KRTAP19-1Q8IUB9 90 aa6.62□□□□□ -1.35
RFC1-211ENST00000509084 CBY1Q9Y3M2 126 aa6.62□□□□□ -1.35
RFC1-211ENST00000509084 RYR3Q15413 4870 aa6.61□□□□□ -1.35
RFC1-211ENST00000509084 A0A1B0GWB2 263 aa6.61□□□□□ -1.35
RFC1-211ENST00000509084 M0R378 163 aa6.61□□□□□ -1.35
RFC1-211ENST00000509084 CHTF8P0CG12 524 aa6.61□□□□□ -1.35
RFC1-211ENST00000509084 FUSP35637 526 aaKnown RBP eCLIP6.61□□□□□ -1.35
RFC1-211ENST00000509084 BATFQ16520 125 aa6.61□□□□□ -1.35
RFC1-211ENST00000509084 NCR3O14931 201 aa6.6□□□□□ -1.35
RFC1-211ENST00000509084 CFC1BP0CG36 223 aa6.6□□□□□ -1.35
RFC1-211ENST00000509084 CFC1P0CG37 223 aa6.6□□□□□ -1.35
RFC1-211ENST00000509084 FAM19A5Q7Z5A7 132 aaPredicted RBP6.6□□□□□ -1.35
RFC1-211ENST00000509084 DPH3Q96FX2 82 aa6.6□□□□□ -1.35
RFC1-211ENST00000509084 SNHG12Q9BXW3 62 aa6.6□□□□□ -1.35
RFC1-211ENST00000509084 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.6□□□□□ -1.35
RFC1-211ENST00000509084 IGKV2-28A0A075B6P5 120 aa6.59□□□□□ -1.35
RFC1-211ENST00000509084 M0QXV9 152 aa6.59□□□□□ -1.35
RFC1-211ENST00000509084 IGKV2D-28P01615 120 aa6.59□□□□□ -1.35
RFC1-211ENST00000509084 LBHQ53QV2 105 aaPredicted RBP6.59□□□□□ -1.35
RFC1-211ENST00000509084 S100A7L2Q5SY68 101 aa6.59□□□□□ -1.35
RFC1-211ENST00000509084 SERTAD4-AS1Q5TG53 156 aa6.59□□□□□ -1.35
RFC1-211ENST00000509084 Q6ZSA8 131 aa6.59□□□□□ -1.35
RFC1-211ENST00000509084 TMEM126AQ9H061 195 aa6.59□□□□□ -1.35
RFC1-211ENST00000509084 PRO1854Q9UHT4 67 aa6.59□□□□□ -1.35
RFC1-211ENST00000509084 FAM168BA1KXE4 195 aa6.58□□□□□ -1.36
RFC1-211ENST00000509084 EPM2AB3EWF7 344 aa6.58□□□□□ -1.36
RFC1-211ENST00000509084 MRPL55Q7Z7F7 128 aaKnown RBP6.58□□□□□ -1.36
RFC1-211ENST00000509084 LINC00337Q8N6G1 96 aa6.58□□□□□ -1.36
RFC1-211ENST00000509084 Q8NDZ9 215 aa6.58□□□□□ -1.36
RFC1-211ENST00000509084 OR13C6PQ8NH95 151 aa6.58□□□□□ -1.36
RFC1-211ENST00000509084 C22orf24Q9Y442 160 aa6.58□□□□□ -1.36
RFC1-211ENST00000509084 FAT2Q9NYQ8 4349 aa6.58□□□□□ -1.36
RFC1-211ENST00000509084 A0A087WYN8 130 aa6.57□□□□□ -1.36
RFC1-211ENST00000509084 A0A1W2PNN7 141 aa6.57□□□□□ -1.36
RFC1-211ENST00000509084 PANO1I0J062 215 aa6.57□□□□□ -1.36
RFC1-211ENST00000509084 RPL13AP40429 203 aaKnown RBP6.57□□□□□ -1.36
RFC1-211ENST00000509084 KRTAP10-1P60331 282 aa6.57□□□□□ -1.36
RFC1-211ENST00000509084 COL5A1-AS1Q5SY13 56 aa6.57□□□□□ -1.36
RFC1-211ENST00000509084 PLAC8Q9NZF1 115 aa6.57□□□□□ -1.36
RFC1-211ENST00000509084 DNAH11Q96DT5 4516 aa6.57□□□□□ -1.36
RFC1-211ENST00000509084 K7ERJ3 54 aa6.56□□□□□ -1.36
RFC1-211ENST00000509084 IGLV6-57P01721 117 aa6.56□□□□□ -1.36
RFC1-211ENST00000509084 PRR3P79522 188 aaKnown RBP6.56□□□□□ -1.36
RFC1-211ENST00000509084 Q1RN00 199 aa6.56□□□□□ -1.36
RFC1-211ENST00000509084 KRTAP7-1Q8IUC3 87 aa6.56□□□□□ -1.36
RFC1-211ENST00000509084 C7orf33Q8WU49 177 aa6.56□□□□□ -1.36
RFC1-211ENST00000509084 C21orf62-AS1Q17RA5 79 aa6.55□□□□□ -1.36
RFC1-211ENST00000509084 TRBV10-3A0A0K0K1G6 114 aa6.54□□□□□ -1.36
RFC1-211ENST00000509084 PRYO14603 147 aa6.54□□□□□ -1.36
RFC1-211ENST00000509084 LINC00167Q96N53 147 aa6.54□□□□□ -1.36
RFC1-211ENST00000509084 IGLV1-50A0A075B6I6 118 aa6.53□□□□□ -1.36
RFC1-211ENST00000509084 TRAV23DV6A0A075B6W5 121 aa6.53□□□□□ -1.36
RFC1-211ENST00000509084 GAGE10A6NGK3 116 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms