RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 ERG28Q9UKR5 140 aa6.55□□□□□ -1.36
POLR2J3-213ENST00000508848 FAM168BA1KXE4 195 aa6.54□□□□□ -1.36
POLR2J3-213ENST00000508848 LEPROTO15243 131 aa6.54□□□□□ -1.36
POLR2J3-213ENST00000508848 IGKCP01834 107 aa6.54□□□□□ -1.36
POLR2J3-213ENST00000508848 LINC01545Q5VT33 79 aa6.54□□□□□ -1.36
POLR2J3-213ENST00000508848 PHF5AQ7RTV0 110 aaKnown RBP6.54□□□□□ -1.36
POLR2J3-213ENST00000508848 PSORS1C2Q9UIG4 136 aa6.54□□□□□ -1.36
POLR2J3-213ENST00000508848 C22orf24Q9Y442 160 aa6.54□□□□□ -1.36
POLR2J3-213ENST00000508848 MYMXA0A1B0GTQ4 84 aa6.53□□□□□ -1.36
POLR2J3-213ENST00000508848 M0QXV9 152 aa6.53□□□□□ -1.36
POLR2J3-213ENST00000508848 NMUP48645 174 aa6.53□□□□□ -1.36
POLR2J3-213ENST00000508848 HERVK_113P61574 105 aa6.53□□□□□ -1.36
POLR2J3-213ENST00000508848 XAGE1AQ9HD64 81 aa6.53□□□□□ -1.36
POLR2J3-213ENST00000508848 PKHD1L1Q86WI1 4243 aa6.52□□□□□ -1.36
POLR2J3-213ENST00000508848 LOC107984156A0A0G2JMH3 177 aa6.52□□□□□ -1.37
POLR2J3-213ENST00000508848 HNRNPA3P51991 378 aaKnown RBP6.52□□□□□ -1.37
POLR2J3-213ENST00000508848 RPL24P83731 157 aaKnown RBP6.52□□□□□ -1.37
POLR2J3-213ENST00000508848 SERTAD4-AS1Q5TG53 156 aa6.52□□□□□ -1.37
POLR2J3-213ENST00000508848 MRPL55Q7Z7F7 128 aaKnown RBP6.52□□□□□ -1.37
POLR2J3-213ENST00000508848 ARL17AQ8IVW1 177 aa6.52□□□□□ -1.37
POLR2J3-213ENST00000508848 SND1-IT1Q9HBX3 110 aa6.52□□□□□ -1.37
POLR2J3-213ENST00000508848 FAM19A5Q7Z5A7 132 aaPredicted RBP6.51□□□□□ -1.37
POLR2J3-213ENST00000508848 NDUFA12Q9UI09 145 aa6.51□□□□□ -1.37
POLR2J3-213ENST00000508848 E9PLD3 99 aa6.5□□□□□ -1.37
POLR2J3-213ENST00000508848 H0Y8G0 127 aa6.5□□□□□ -1.37
POLR2J3-213ENST00000508848 J3QQQ9 107 aa6.5□□□□□ -1.37
POLR2J3-213ENST00000508848 IGLV7-43P04211 117 aa6.5□□□□□ -1.37
POLR2J3-213ENST00000508848 PFN2P35080 140 aa6.5□□□□□ -1.37
POLR2J3-213ENST00000508848 LCE1DQ5T752 114 aa6.5□□□□□ -1.37
POLR2J3-213ENST00000508848 C3orf79P0CE67 100 aa6.49□□□□□ -1.37
POLR2J3-213ENST00000508848 VPREB1P12018 145 aa6.49□□□□□ -1.37
POLR2J3-213ENST00000508848 C1orf137Q5JT78 98 aa6.49□□□□□ -1.37
POLR2J3-213ENST00000508848 REG3GQ6UW15 175 aa6.49□□□□□ -1.37
POLR2J3-213ENST00000508848 DIRC1Q969H9 104 aa6.49□□□□□ -1.37
POLR2J3-213ENST00000508848 LINC01600Q96MT4 127 aa6.49□□□□□ -1.37
POLR2J3-213ENST00000508848 LRP1Q07954 4544 aaKnown RBP6.48□□□□□ -1.37
POLR2J3-213ENST00000508848 LINC00158P58513 81 aa6.48□□□□□ -1.37
POLR2J3-213ENST00000508848 UBE2BP63146 152 aa6.48□□□□□ -1.37
POLR2J3-213ENST00000508848 KRTAP11-1Q8IUC1 163 aa6.48□□□□□ -1.37
POLR2J3-213ENST00000508848 NKAPP1Q8N9T2 125 aa6.48□□□□□ -1.37
POLR2J3-213ENST00000508848 LINC00167Q96N53 147 aa6.48□□□□□ -1.37
POLR2J3-213ENST00000508848 IGKV2D-26A0A0A0MRZ7 120 aa6.47□□□□□ -1.37
POLR2J3-213ENST00000508848 SNRPEP62304 92 aaKnown RBP6.47□□□□□ -1.37
POLR2J3-213ENST00000508848 PMCHL2Q9BQD1 86 aa6.47□□□□□ -1.37
POLR2J3-213ENST00000508848 IGLV1-50A0A075B6I6 118 aa6.46□□□□□ -1.38
POLR2J3-213ENST00000508848 C20orf202A1L168 122 aa6.46□□□□□ -1.38
POLR2J3-213ENST00000508848 LGALS3P17931 250 aaKnown RBP6.46□□□□□ -1.38
POLR2J3-213ENST00000508848 TSPEAR-AS2P59090 65 aa6.46□□□□□ -1.38
POLR2J3-213ENST00000508848 MEIG1Q5JSS6 88 aa6.46□□□□□ -1.38
POLR2J3-213ENST00000508848 M0R378 163 aa6.45□□□□□ -1.38
POLR2J3-213ENST00000508848 ZNF861PO60384 105 aa6.45□□□□□ -1.38
POLR2J3-213ENST00000508848 BCE1O60756 84 aa6.45□□□□□ -1.38
POLR2J3-213ENST00000508848 TIMM17BO60830 172 aa6.45□□□□□ -1.38
POLR2J3-213ENST00000508848 SMIM13P0DJ93 91 aa6.45□□□□□ -1.38
POLR2J3-213ENST00000508848 MT1HL1P0DM35 61 aa6.45□□□□□ -1.38
POLR2J3-213ENST00000508848 HIST3H2BBQ8N257 126 aa6.45□□□□□ -1.38
POLR2J3-213ENST00000508848 HERC1Q15751 4861 aa6.45□□□□□ -1.38
POLR2J3-213ENST00000508848 FAT3Q8TDW7 4589 aa6.45□□□□□ -1.38
POLR2J3-213ENST00000508848 H0Y9J4 135 aa6.44□□□□□ -1.38
POLR2J3-213ENST00000508848 S100A6P06703 90 aa6.44□□□□□ -1.38
POLR2J3-213ENST00000508848 KRTAP10-8P60410 259 aa6.44□□□□□ -1.38
POLR2J3-213ENST00000508848 MIR7-3HGQ8N6C7 128 aa6.44□□□□□ -1.38
POLR2J3-213ENST00000508848 PPDPFQ9H3Y8 114 aa6.44□□□□□ -1.38
POLR2J3-213ENST00000508848 TMA7Q9Y2S6 64 aaKnown RBP6.44□□□□□ -1.38
POLR2J3-213ENST00000508848 TRBV10-2A0A0K0K1G8 114 aa6.43□□□□□ -1.38
POLR2J3-213ENST00000508848 NDUFC2O95298 119 aa6.43□□□□□ -1.38
POLR2J3-213ENST00000508848 RPL28P46779 137 aaKnown RBP6.43□□□□□ -1.38
POLR2J3-213ENST00000508848 KRTDAPP60985 99 aa6.43□□□□□ -1.38
POLR2J3-213ENST00000508848 HIST1H2BLQ99880 126 aa6.43□□□□□ -1.38
POLR2J3-213ENST00000508848 A0A0J9YXY3 114 aa6.42□□□□□ -1.38
POLR2J3-213ENST00000508848 S100A2P29034 98 aa6.42□□□□□ -1.38
POLR2J3-213ENST00000508848 KRTAP13-1Q8IUC0 172 aa6.42□□□□□ -1.38
POLR2J3-213ENST00000508848 C5orf52A6NGY3 159 aa6.41□□□□□ -1.38
POLR2J3-213ENST00000508848 RPL37AP8A6NKH3 93 aa6.41□□□□□ -1.38
POLR2J3-213ENST00000508848 C4orf48Q5BLP8 95 aa6.41□□□□□ -1.38
POLR2J3-213ENST00000508848 BOD1L2Q8IYS8 172 aa6.41□□□□□ -1.38
POLR2J3-213ENST00000508848 Q8NDZ9 215 aa6.41□□□□□ -1.38
POLR2J3-213ENST00000508848 KCNQ1DNQ9H478 68 aa6.41□□□□□ -1.38
POLR2J3-213ENST00000508848 Q6ZVH6 145 aa6.4□□□□□ -1.38
POLR2J3-213ENST00000508848 A0A0U1RRA0 63 aa6.39□□□□□ -1.39
POLR2J3-213ENST00000508848 SPRR1AP35321 89 aa6.39□□□□□ -1.39
POLR2J3-213ENST00000508848 LITAFQ99732 161 aa6.39□□□□□ -1.39
POLR2J3-213ENST00000508848 MIEN1Q9BRT3 115 aa6.39□□□□□ -1.39
POLR2J3-213ENST00000508848 TMEM126AQ9H061 195 aa6.39□□□□□ -1.39
POLR2J3-213ENST00000508848 CBY1Q9Y3M2 126 aa6.39□□□□□ -1.39
POLR2J3-213ENST00000508848 GAGE10A6NGK3 116 aa6.38□□□□□ -1.39
POLR2J3-213ENST00000508848 ZNF815PA8K554 130 aa6.38□□□□□ -1.39
POLR2J3-213ENST00000508848 PRYO14603 147 aa6.38□□□□□ -1.39
POLR2J3-213ENST00000508848 KRTAP1-4P0C5Y4 121 aa6.38□□□□□ -1.39
POLR2J3-213ENST00000508848 ADAMTSL4-AS1Q5T5F5 129 aa6.38□□□□□ -1.39
POLR2J3-213ENST00000508848 LINC00337Q8N6G1 96 aa6.38□□□□□ -1.39
POLR2J3-213ENST00000508848 COPS9Q8WXC6 57 aa6.38□□□□□ -1.39
POLR2J3-213ENST00000508848 SPANXB1Q9NS25 103 aaPredicted RBP6.38□□□□□ -1.39
POLR2J3-213ENST00000508848 IGKV2-28A0A075B6P5 120 aa6.37□□□□□ -1.39
POLR2J3-213ENST00000508848 KRTAP4-16G5E9R7 235 aaPredicted RBP6.37□□□□□ -1.39
POLR2J3-213ENST00000508848 IGKV2D-28P01615 120 aa6.37□□□□□ -1.39
POLR2J3-213ENST00000508848 RPL13AP40429 203 aaKnown RBP6.37□□□□□ -1.39
POLR2J3-213ENST00000508848 S100A12P80511 92 aa6.37□□□□□ -1.39
POLR2J3-213ENST00000508848 KRTAP4-9Q9BYQ8 210 aa6.37□□□□□ -1.39
POLR2J3-213ENST00000508848 IFITM1P13164 125 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms