RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 DPM3Q9P2X0 92 aa3.19□□□□□ -1.9
PDLIM5-211ENST00000508531 DOCK10Q96BY6 2186 aa3.19□□□□□ -1.9
PDLIM5-211ENST00000508531 IGHV3-64A0A075B6Q5 118 aa3.18□□□□□ -1.9
PDLIM5-211ENST00000508531 RNASE3P12724 160 aaKnown RBP3.18□□□□□ -1.9
PDLIM5-211ENST00000508531 ENHOQ6UWT2 76 aa3.18□□□□□ -1.9
PDLIM5-211ENST00000508531 KTN1-AS1Q86SY8 53 aa3.18□□□□□ -1.9
PDLIM5-211ENST00000508531 STHQ8IWL8 128 aa3.18□□□□□ -1.9
PDLIM5-211ENST00000508531 Q8N2B8 174 aa3.18□□□□□ -1.9
PDLIM5-211ENST00000508531 MDS2Q8NDY4 140 aa3.18□□□□□ -1.9
PDLIM5-211ENST00000508531 Q9H8V8 135 aa3.18□□□□□ -1.9
PDLIM5-211ENST00000508531 MEGF8Q7Z7M0 2845 aa3.18□□□□□ -1.9
PDLIM5-211ENST00000508531 DSCAMO60469 2012 aa3.17□□□□□ -1.9
PDLIM5-211ENST00000508531 MGAM2Q2M2H8 2515 aa3.17□□□□□ -1.9
PDLIM5-211ENST00000508531 TRBV7-4A0A0J9YYF1 115 aa3.17□□□□□ -1.9
PDLIM5-211ENST00000508531 KLLNB2CW77 178 aa3.17□□□□□ -1.9
PDLIM5-211ENST00000508531 NDUFB1O75438 58 aa3.17□□□□□ -1.9
PDLIM5-211ENST00000508531 APELAP0DMC3 54 aa3.17□□□□□ -1.9
PDLIM5-211ENST00000508531 MINOS1Q5TGZ0 78 aa3.17□□□□□ -1.9
PDLIM5-211ENST00000508531 MUC7Q8TAX7 377 aa3.17□□□□□ -1.9
PDLIM5-211ENST00000508531 TMEM254Q8TBM7 123 aa3.17□□□□□ -1.9
PDLIM5-211ENST00000508531 DEFB127Q9H1M4 99 aa3.17□□□□□ -1.9
PDLIM5-211ENST00000508531 SND1-IT1Q9HBX3 110 aa3.17□□□□□ -1.9
PDLIM5-211ENST00000508531 PRR34Q9NV39 138 aa3.17□□□□□ -1.9
PDLIM5-211ENST00000508531 C22orf24Q9Y442 160 aa3.17□□□□□ -1.9
PDLIM5-211ENST00000508531 MINOS1-NBL1R4GNA1 71 aa3.17□□□□□ -1.9
PDLIM5-211ENST00000508531 A0A087WZ39 114 aa3.16□□□□□ -1.9
PDLIM5-211ENST00000508531 IGHV3-72A0A0B4J1Y9 119 aa3.16□□□□□ -1.9
PDLIM5-211ENST00000508531 A0A1B0GW54 56 aa3.16□□□□□ -1.9
PDLIM5-211ENST00000508531 NDUFA4O00483 81 aa3.16□□□□□ -1.9
PDLIM5-211ENST00000508531 LECT2O14960 151 aa3.16□□□□□ -1.9
PDLIM5-211ENST00000508531 VPREB1P12018 145 aa3.16□□□□□ -1.9
PDLIM5-211ENST00000508531 UBE2AP49459 152 aa3.16□□□□□ -1.9
PDLIM5-211ENST00000508531 NREPQ16612 68 aa3.16□□□□□ -1.9
PDLIM5-211ENST00000508531 DEFB114Q30KQ6 69 aa3.16□□□□□ -1.9
PDLIM5-211ENST00000508531 IGFL2Q6UWQ7 119 aa3.16□□□□□ -1.9
PDLIM5-211ENST00000508531 LINC01560Q8TB33 94 aa3.16□□□□□ -1.9
PDLIM5-211ENST00000508531 CCL17Q92583 94 aa3.16□□□□□ -1.9
PDLIM5-211ENST00000508531 RYR3Q15413 4870 aa3.15□□□□□ -1.9
PDLIM5-211ENST00000508531 E7EQL1 145 aa3.15□□□□□ -1.91
PDLIM5-211ENST00000508531 H3BUA1 57 aa3.15□□□□□ -1.91
PDLIM5-211ENST00000508531 C9orf66Q5T8R8 295 aa3.15□□□□□ -1.91
PDLIM5-211ENST00000508531 FAM74A4Q5TZK3 123 aa3.15□□□□□ -1.91
PDLIM5-211ENST00000508531 ATP11AUNQ6ZP68 121 aa3.15□□□□□ -1.91
PDLIM5-211ENST00000508531 Q6ZVQ6 151 aa3.15□□□□□ -1.91
PDLIM5-211ENST00000508531 MIR7-3HGQ8N6C7 128 aa3.15□□□□□ -1.91
PDLIM5-211ENST00000508531 ZNF625Q96I27 306 aaPredicted RBP3.15□□□□□ -1.91
PDLIM5-211ENST00000508531 FAM218AQ96MZ4 157 aa3.15□□□□□ -1.91
PDLIM5-211ENST00000508531 TM2D3Q9BRN9 247 aa3.15□□□□□ -1.91
PDLIM5-211ENST00000508531 CYP4F30PQ9H0H9 118 aa3.15□□□□□ -1.91
PDLIM5-211ENST00000508531 Q9HAA7 133 aa3.15□□□□□ -1.91
PDLIM5-211ENST00000508531 ZNRD1Q9P1U0 126 aa3.15□□□□□ -1.91
PDLIM5-211ENST00000508531 ABCA1O95477 2261 aa3.15□□□□□ -1.91
PDLIM5-211ENST00000508531 FREM1Q5H8C1 2179 aa3.15□□□□□ -1.91
PDLIM5-211ENST00000508531 NACAE9PAV3 2078 aa3.15□□□□□ -1.91
PDLIM5-211ENST00000508531 TRRAPQ9Y4A5 3859 aa3.14□□□□□ -1.91
PDLIM5-211ENST00000508531 KMT2CQ8NEZ4 4911 aaKnown RBP3.14□□□□□ -1.91
PDLIM5-211ENST00000508531 IGHV1OR15-1A0A075B7D0 117 aa3.14□□□□□ -1.91
PDLIM5-211ENST00000508531 IGHV3-16A0A0C4DH30 117 aa3.14□□□□□ -1.91
PDLIM5-211ENST00000508531 NCR3O14931 201 aa3.14□□□□□ -1.91
PDLIM5-211ENST00000508531 ATP6V0E1O15342 81 aa3.14□□□□□ -1.91
PDLIM5-211ENST00000508531 DNAH10OSP0CZ25 163 aa3.14□□□□□ -1.91
PDLIM5-211ENST00000508531 PRR9Q5T870 116 aa3.14□□□□□ -1.91
PDLIM5-211ENST00000508531 LINC00612Q8N6U2 182 aa3.14□□□□□ -1.91
PDLIM5-211ENST00000508531 SMIM11BQ8TCY0 68 aa3.14□□□□□ -1.91
PDLIM5-211ENST00000508531 RMI2Q96E14 147 aa3.14□□□□□ -1.91
PDLIM5-211ENST00000508531 USMG5Q96IX5 58 aa3.14□□□□□ -1.91
PDLIM5-211ENST00000508531 LIMD2Q9BT23 127 aa3.14□□□□□ -1.91
PDLIM5-211ENST00000508531 ESM1Q9NQ30 184 aa3.14□□□□□ -1.91
PDLIM5-211ENST00000508531 CDKN2A-AS1Q9UH64 79 aa3.14□□□□□ -1.91
PDLIM5-211ENST00000508531 HRNRQ86YZ3 2850 aaPredicted RBP3.14□□□□□ -1.91
PDLIM5-211ENST00000508531 PRR14LQ5THK1 2151 aa3.14□□□□□ -1.91
PDLIM5-211ENST00000508531 TRBV6-4A0A1B0GX49 114 aa3.13□□□□□ -1.91
PDLIM5-211ENST00000508531 hDV103S1A0JD37 113 aa3.13□□□□□ -1.91
PDLIM5-211ENST00000508531 CLPSL1A2RUU4 121 aa3.13□□□□□ -1.91
PDLIM5-211ENST00000508531 BPY2O14599 106 aa3.13□□□□□ -1.91
PDLIM5-211ENST00000508531 GNRH2O43555 120 aa3.13□□□□□ -1.91
PDLIM5-211ENST00000508531 HAMPP81172 84 aa3.13□□□□□ -1.91
PDLIM5-211ENST00000508531 ECSCRQ19T08 205 aa3.13□□□□□ -1.91
PDLIM5-211ENST00000508531 PHF5AQ7RTV0 110 aaKnown RBP3.13□□□□□ -1.91
PDLIM5-211ENST00000508531 Q8N6K4 173 aa3.13□□□□□ -1.91
PDLIM5-211ENST00000508531 Q8N814 137 aa3.13□□□□□ -1.91
PDLIM5-211ENST00000508531 LINC00474Q9P2X8 69 aa3.13□□□□□ -1.91
PDLIM5-211ENST00000508531 SNURFQ9Y675 71 aa3.13□□□□□ -1.91
PDLIM5-211ENST00000508531 WNK1Q9H4A3 2382 aa3.12□□□□□ -1.91
PDLIM5-211ENST00000508531 TRBV10-1A0A0K0K1A3 114 aa3.12□□□□□ -1.91
PDLIM5-211ENST00000508531 A0A1W2PPR1 153 aa3.12□□□□□ -1.91
PDLIM5-211ENST00000508531 IGKV2-29A2NJV5 120 aaPredicted RBP3.12□□□□□ -1.91
PDLIM5-211ENST00000508531 ODF3BA8MYP8 253 aa3.12□□□□□ -1.91
PDLIM5-211ENST00000508531 K7EMT4 169 aa3.12□□□□□ -1.91
PDLIM5-211ENST00000508531 COX7A1P24310 79 aa3.12□□□□□ -1.91
PDLIM5-211ENST00000508531 ELOF1P60002 83 aaKnown RBP3.12□□□□□ -1.91
PDLIM5-211ENST00000508531 KRTAP10-8P60410 259 aa3.12□□□□□ -1.91
PDLIM5-211ENST00000508531 COX17Q14061 63 aa3.12□□□□□ -1.91
PDLIM5-211ENST00000508531 SS18Q15532 418 aa3.12□□□□□ -1.91
PDLIM5-211ENST00000508531 Q6ZQT0 140 aa3.12□□□□□ -1.91
PDLIM5-211ENST00000508531 C6orf223Q8N319 242 aa3.12□□□□□ -1.91
PDLIM5-211ENST00000508531 COX7B2Q8TF08 81 aa3.12□□□□□ -1.91
PDLIM5-211ENST00000508531 Q9UF83 564 aa3.12□□□□□ -1.91
PDLIM5-211ENST00000508531 DNAJC13O75165 2243 aa3.11□□□□□ -1.91
PDLIM5-211ENST00000508531 IGHV7-81A0A0B4J1V7 117 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms