RNA–Protein interactions for RNA: ENST00000508190.1

HOXC9-203, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HOXC9, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-203ENST00000508190 LINC00518Q8N0U6 118 aa13.18□□□□□ -0.3
HOXC9-203ENST00000508190 A0A087WYN8 130 aa13.17□□□□□ -0.3
HOXC9-203ENST00000508190 SOSTDC1Q6X4U4 206 aa13.17□□□□□ -0.3
HOXC9-203ENST00000508190 KRTAP7-1Q8IUC3 87 aa13.17□□□□□ -0.3
HOXC9-203ENST00000508190 SPANXDQ9BXN6 97 aa13.17□□□□□ -0.3
HOXC9-203ENST00000508190 SPANXCQ9NY87 97 aa13.17□□□□□ -0.3
HOXC9-203ENST00000508190 SERTAD4-AS1Q5TG53 156 aa13.16□□□□□ -0.3
HOXC9-203ENST00000508190 SCXQ7RTU7 201 aa13.16□□□□□ -0.3
HOXC9-203ENST00000508190 FAM19A5Q7Z5A7 132 aaPredicted RBP13.16□□□□□ -0.3
HOXC9-203ENST00000508190 Q8NDZ9 215 aa13.16□□□□□ -0.3
HOXC9-203ENST00000508190 APOBP04114 4563 aaKnown RBP13.16□□□□□ -0.3
HOXC9-203ENST00000508190 CIRBP-AS1Q8TBR5 109 aa13.15□□□□□ -0.3
HOXC9-203ENST00000508190 LINC00308Q8TCZ7 52 aa13.14□□□□□ -0.31
HOXC9-203ENST00000508190 UQCR10Q9UDW1 63 aa13.14□□□□□ -0.31
HOXC9-203ENST00000508190 SPANXB1Q9NS25 103 aaPredicted RBP13.13□□□□□ -0.31
HOXC9-203ENST00000508190 XGP55808 180 aa13.13□□□□□ -0.31
HOXC9-203ENST00000508190 MIEN1Q9BRT3 115 aa13.13□□□□□ -0.31
HOXC9-203ENST00000508190 PLAC8Q9NZF1 115 aa13.13□□□□□ -0.31
HOXC9-203ENST00000508190 LOC107984156A0A0G2JMH3 177 aa13.12□□□□□ -0.31
HOXC9-203ENST00000508190 SRSF9Q13242 221 aaKnown RBP eCLIP13.12□□□□□ -0.31
HOXC9-203ENST00000508190 ARL17AQ8IVW1 177 aa13.12□□□□□ -0.31
HOXC9-203ENST00000508190 HIGD1BQ9P298 99 aa13.12□□□□□ -0.31
HOXC9-203ENST00000508190 VPREB1P12018 145 aa13.1□□□□□ -0.31
HOXC9-203ENST00000508190 MUSTN1Q8IVN3 82 aa13.1□□□□□ -0.31
HOXC9-203ENST00000508190 PLA2G2DQ9UNK4 145 aa13.1□□□□□ -0.31
HOXC9-203ENST00000508190 Q6ZVH6 145 aa13.09□□□□□ -0.31
HOXC9-203ENST00000508190 EPM2AB3EWF7 344 aa13.08□□□□□ -0.31
HOXC9-203ENST00000508190 PRR3P79522 188 aaKnown RBP13.08□□□□□ -0.31
HOXC9-203ENST00000508190 HIST1H4GQ99525 98 aa13.08□□□□□ -0.31
HOXC9-203ENST00000508190 M0QXV9 152 aa13.08□□□□□ -0.32
HOXC9-203ENST00000508190 PHF5AQ7RTV0 110 aaKnown RBP13.08□□□□□ -0.32
HOXC9-203ENST00000508190 IFITM1P13164 125 aa13.07□□□□□ -0.32
HOXC9-203ENST00000508190 C22orf24Q9Y442 160 aa13.07□□□□□ -0.32
HOXC9-203ENST00000508190 IGLV5-37A0A075B6J1 123 aa13.06□□□□□ -0.32
HOXC9-203ENST00000508190 NCR3O14931 201 aa13.06□□□□□ -0.32
HOXC9-203ENST00000508190 RPL24P83731 157 aaKnown RBP13.06□□□□□ -0.32
HOXC9-203ENST00000508190 NKAPP1Q8N9T2 125 aa13.06□□□□□ -0.32
HOXC9-203ENST00000508190 HNRNPA3P51991 378 aaKnown RBP13.05□□□□□ -0.32
HOXC9-203ENST00000508190 BIRC6Q9NR09 4857 aa13.05□□□□□ -0.32
HOXC9-203ENST00000508190 TSTD3H0UI37 97 aa13.04□□□□□ -0.32
HOXC9-203ENST00000508190 CDK2AP2O75956 126 aa13.04□□□□□ -0.32
HOXC9-203ENST00000508190 COPS9Q8WXC6 57 aa13.03□□□□□ -0.32
HOXC9-203ENST00000508190 RYR1P21817 5038 aa13.03□□□□□ -0.32
HOXC9-203ENST00000508190 GAGE10A6NGK3 116 aa13.03□□□□□ -0.32
HOXC9-203ENST00000508190 NDUFC2O95298 119 aa13.03□□□□□ -0.32
HOXC9-203ENST00000508190 KIAA1109Q2LD37 5005 aa13.02□□□□□ -0.33
HOXC9-203ENST00000508190 MRPL55Q7Z7F7 128 aaKnown RBP13.02□□□□□ -0.33
HOXC9-203ENST00000508190 C7orf33Q8WU49 177 aa13.02□□□□□ -0.33
HOXC9-203ENST00000508190 PPDPFQ9H3Y8 114 aa13.02□□□□□ -0.33
HOXC9-203ENST00000508190 TAL2Q16559 108 aa13□□□□□ -0.33
HOXC9-203ENST00000508190 LINC00167Q96N53 147 aa13□□□□□ -0.33
HOXC9-203ENST00000508190 IGKV2-28A0A075B6P5 120 aa12.99□□□□□ -0.33
HOXC9-203ENST00000508190 A4D1N5 150 aa12.99□□□□□ -0.33
HOXC9-203ENST00000508190 IGKV2D-28P01615 120 aa12.99□□□□□ -0.33
HOXC9-203ENST00000508190 SMR3BP02814 79 aaPredicted RBP12.99□□□□□ -0.33
HOXC9-203ENST00000508190 HSD52Q0P140 79 aa12.99□□□□□ -0.33
HOXC9-203ENST00000508190 KRTAP11-1Q8IUC1 163 aa12.99□□□□□ -0.33
HOXC9-203ENST00000508190 CEND1Q8N111 149 aa12.99□□□□□ -0.33
HOXC9-203ENST00000508190 HSPG2P98160 4391 aa12.98□□□□□ -0.33
HOXC9-203ENST00000508190 RPL37AP8A6NKH3 93 aa12.98□□□□□ -0.33
HOXC9-203ENST00000508190 M0R378 163 aa12.98□□□□□ -0.33
HOXC9-203ENST00000508190 LBHQ53QV2 105 aaPredicted RBP12.97□□□□□ -0.33
HOXC9-203ENST00000508190 TRBV10-2A0A0K0K1G8 114 aa12.96□□□□□ -0.33
HOXC9-203ENST00000508190 UBE2BP63146 152 aa12.96□□□□□ -0.33
HOXC9-203ENST00000508190 FXYD2P54710 66 aa12.95□□□□□ -0.34
HOXC9-203ENST00000508190 CTAG1AP78358 180 aa12.95□□□□□ -0.34
HOXC9-203ENST00000508190 LINC00337Q8N6G1 96 aa12.95□□□□□ -0.34
HOXC9-203ENST00000508190 TRBV10-3A0A0K0K1G6 114 aa12.93□□□□□ -0.34
HOXC9-203ENST00000508190 LINC00528Q8N1L1 170 aa12.93□□□□□ -0.34
HOXC9-203ENST00000508190 IGLV1-50A0A075B6I6 118 aa12.93□□□□□ -0.34
HOXC9-203ENST00000508190 DDTP30046 118 aa12.92□□□□□ -0.34
HOXC9-203ENST00000508190 S100A7L2Q5SY68 101 aa12.92□□□□□ -0.34
HOXC9-203ENST00000508190 OR13C6PQ8NH95 151 aa12.91□□□□□ -0.34
HOXC9-203ENST00000508190 IGLV6-57P01721 117 aa12.89□□□□□ -0.35
HOXC9-203ENST00000508190 KRTAP17-1Q9BYP8 105 aa12.89□□□□□ -0.35
HOXC9-203ENST00000508190 PSORS1C2Q9UIG4 136 aa12.89□□□□□ -0.35
HOXC9-203ENST00000508190 CFC1BP0CG36 223 aa12.88□□□□□ -0.35
HOXC9-203ENST00000508190 CFC1P0CG37 223 aa12.88□□□□□ -0.35
HOXC9-203ENST00000508190 FAT1Q14517 4588 aa12.88□□□□□ -0.35
HOXC9-203ENST00000508190 A6NDN8 102 aa12.88□□□□□ -0.35
HOXC9-203ENST00000508190 HINT1P49773 126 aaPredicted RBP12.88□□□□□ -0.35
HOXC9-203ENST00000508190 TMEM238LA0A1B0GVL6 79 aa12.87□□□□□ -0.35
HOXC9-203ENST00000508190 A6NJY4 79 aa12.87□□□□□ -0.35
HOXC9-203ENST00000508190 BVES-AS1Q5T3Y7 98 aa12.87□□□□□ -0.35
HOXC9-203ENST00000508190 VPS13BQ7Z7G8 4022 aa12.86□□□□□ -0.35
HOXC9-203ENST00000508190 TMEM126AQ9H061 195 aa12.86□□□□□ -0.35
HOXC9-203ENST00000508190 TRAV13-2A0A0B4J235 113 aa12.85□□□□□ -0.35
HOXC9-203ENST00000508190 RPL37AP61513 92 aaKnown RBP12.84□□□□□ -0.35
HOXC9-203ENST00000508190 KCNQ1DNQ9H478 68 aa12.84□□□□□ -0.35
HOXC9-203ENST00000508190 NHP2Q9NX24 153 aaKnown RBP12.84□□□□□ -0.35
HOXC9-203ENST00000508190 A0A0B4J2C4 111 aa12.83□□□□□ -0.35
HOXC9-203ENST00000508190 PRYO14603 147 aa12.83□□□□□ -0.35
HOXC9-203ENST00000508190 C1orf137Q5JT78 98 aa12.83□□□□□ -0.35
HOXC9-203ENST00000508190 REG3GQ6UW15 175 aa12.83□□□□□ -0.35
HOXC9-203ENST00000508190 RAB37Q96AX2 223 aa12.83□□□□□ -0.35
HOXC9-203ENST00000508190 TRAV23DV6A0A075B6W5 121 aa12.83□□□□□ -0.36
HOXC9-203ENST00000508190 K7ERJ3 54 aa12.83□□□□□ -0.36
HOXC9-203ENST00000508190 RPL13AP40429 203 aaKnown RBP12.83□□□□□ -0.36
HOXC9-203ENST00000508190 M0R143 59 aa12.82□□□□□ -0.36
HOXC9-203ENST00000508190 PCP4L1A6NKN8 68 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms