RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 IMUPQ9GZP8 106 aa7.37□□□□□ -1.23
LIN54-207ENST00000508171 WIPF1O43516 503 aa7.36□□□□□ -1.23
LIN54-207ENST00000508171 LINC00846Q9NV44 126 aa7.36□□□□□ -1.23
LIN54-207ENST00000508171 S100A7L2Q5SY68 101 aa7.35□□□□□ -1.23
LIN54-207ENST00000508171 STAB1Q9NY15 2570 aa7.35□□□□□ -1.23
LIN54-207ENST00000508171 FBN1P35555 2871 aaKnown RBP7.35□□□□□ -1.23
LIN54-207ENST00000508171 F8P00451 2351 aa7.35□□□□□ -1.23
LIN54-207ENST00000508171 KRTAP10-11P60412 298 aa7.35□□□□□ -1.23
LIN54-207ENST00000508171 LINC00167Q96N53 147 aa7.35□□□□□ -1.23
LIN54-207ENST00000508171 A0A0J9YWU9 116 aa7.34□□□□□ -1.23
LIN54-207ENST00000508171 WFDC10BQ8IUB3 73 aa7.34□□□□□ -1.23
LIN54-207ENST00000508171 RPL18AQ02543 176 aaKnown RBP7.34□□□□□ -1.24
LIN54-207ENST00000508171 KPRPQ5T749 579 aaPredicted RBP7.33□□□□□ -1.24
LIN54-207ENST00000508171 XAGE1AQ9HD64 81 aa7.33□□□□□ -1.24
LIN54-207ENST00000508171 C6orf48Q9UBA6 75 aa7.33□□□□□ -1.24
LIN54-207ENST00000508171 IGKV3D-7A0A0C4DH55 119 aa7.32□□□□□ -1.24
LIN54-207ENST00000508171 Q6ZTC4 211 aa7.32□□□□□ -1.24
LIN54-207ENST00000508171 A0A1B0GX51 115 aa7.32□□□□□ -1.24
LIN54-207ENST00000508171 TMEM256-PLSCR3K7ERE1 68 aa7.32□□□□□ -1.24
LIN54-207ENST00000508171 LINC00575Q6W349 94 aa7.31□□□□□ -1.24
LIN54-207ENST00000508171 CMYA5Q8N3K9 4069 aa7.31□□□□□ -1.24
LIN54-207ENST00000508171 CCKP06307 115 aa7.31□□□□□ -1.24
LIN54-207ENST00000508171 HIGD2BQ4VC39 106 aa7.31□□□□□ -1.24
LIN54-207ENST00000508171 SMIM20Q8N5G0 67 aa7.31□□□□□ -1.24
LIN54-207ENST00000508171 IGLV6-57P01721 117 aa7.3□□□□□ -1.24
LIN54-207ENST00000508171 C3orf56Q8N813 242 aa7.3□□□□□ -1.24
LIN54-207ENST00000508171 FLNBO75369 2602 aaKnown RBP7.29□□□□□ -1.24
LIN54-207ENST00000508171 GVQW2A0A096LPI5 108 aaPredicted RBP7.29□□□□□ -1.24
LIN54-207ENST00000508171 TRBV10-3A0A0K0K1G6 114 aa7.29□□□□□ -1.24
LIN54-207ENST00000508171 JMJD7-PLA2G4BH0Y9G9 81 aa7.29□□□□□ -1.24
LIN54-207ENST00000508171 ESRGQ1W209 222 aa7.29□□□□□ -1.24
LIN54-207ENST00000508171 NOTCH1P46531 2555 aa7.28□□□□□ -1.24
LIN54-207ENST00000508171 hADV29S1A0JD25 119 aa7.28□□□□□ -1.24
LIN54-207ENST00000508171 KRTAP26-1Q6PEX3 210 aa7.28□□□□□ -1.24
LIN54-207ENST00000508171 ZNF561-AS1K7EIQ3 104 aa7.28□□□□□ -1.24
LIN54-207ENST00000508171 MUC7Q8TAX7 377 aa7.28□□□□□ -1.24
LIN54-207ENST00000508171 A0A087WVE0 104 aa7.27□□□□□ -1.25
LIN54-207ENST00000508171 Q6JHZ5 121 aa7.27□□□□□ -1.25
LIN54-207ENST00000508171 CAMK2N2Q96S95 79 aa7.27□□□□□ -1.25
LIN54-207ENST00000508171 MAST4O15021 2626 aa7.27□□□□□ -1.25
LIN54-207ENST00000508171 H3BNG1 76 aa7.26□□□□□ -1.25
LIN54-207ENST00000508171 Q6ZRU5 148 aa7.26□□□□□ -1.25
LIN54-207ENST00000508171 HIST1H4AP62805 103 aaKnown RBP7.25□□□□□ -1.25
LIN54-207ENST00000508171 C15orf56Q8N910 161 aa7.25□□□□□ -1.25
LIN54-207ENST00000508171 KRTAP24-1Q3LI83 254 aa7.25□□□□□ -1.25
LIN54-207ENST00000508171 Q6ZQY7 126 aa7.25□□□□□ -1.25
LIN54-207ENST00000508171 TRAV23DV6A0A075B6W5 121 aa7.24□□□□□ -1.25
LIN54-207ENST00000508171 LAMTOR3Q9UHA4 124 aa7.24□□□□□ -1.25
LIN54-207ENST00000508171 RBM3P98179 157 aaKnown RBP7.24□□□□□ -1.25
LIN54-207ENST00000508171 EGFEM1PQ0D2K5 195 aa7.24□□□□□ -1.25
LIN54-207ENST00000508171 DEFB131BA0A096LNP1 70 aa7.23□□□□□ -1.25
LIN54-207ENST00000508171 M0R2N4 97 aa7.23□□□□□ -1.25
LIN54-207ENST00000508171 C3orf22Q8N5N4 141 aa7.23□□□□□ -1.25
LIN54-207ENST00000508171 ZNF73O43830 326 aaPredicted RBP7.23□□□□□ -1.25
LIN54-207ENST00000508171 VPREB1P12018 145 aa7.23□□□□□ -1.25
LIN54-207ENST00000508171 DIRC1Q969H9 104 aa7.23□□□□□ -1.25
LIN54-207ENST00000508171 IGKV2D-24A0A075B6R9 120 aa7.22□□□□□ -1.25
LIN54-207ENST00000508171 Q6ZQT0 140 aa7.22□□□□□ -1.25
LIN54-207ENST00000508171 C2orf48Q96LS8 159 aa7.22□□□□□ -1.25
LIN54-207ENST00000508171 C11orf45Q8TAV5 145 aa7.22□□□□□ -1.25
LIN54-207ENST00000508171 UQCRQO14949 82 aa7.21□□□□□ -1.25
LIN54-207ENST00000508171 C9orf153Q5TBE3 101 aa7.21□□□□□ -1.25
LIN54-207ENST00000508171 C1orf43Q9BWL3 253 aa7.21□□□□□ -1.25
LIN54-207ENST00000508171 Q6ZRP5 223 aa7.21□□□□□ -1.26
LIN54-207ENST00000508171 NBEAL1Q6ZS30 2694 aa7.2□□□□□ -1.26
LIN54-207ENST00000508171 NDUFC2-KCTD14E9PQ53 114 aa7.2□□□□□ -1.26
LIN54-207ENST00000508171 COX7CP15954 63 aa7.2□□□□□ -1.26
LIN54-207ENST00000508171 DNAH3Q8TD57 4116 aa7.2□□□□□ -1.26
LIN54-207ENST00000508171 ATOX1O00244 68 aa7.2□□□□□ -1.26
LIN54-207ENST00000508171 COX7BP24311 80 aa7.2□□□□□ -1.26
LIN54-207ENST00000508171 LINC01556Q5JQF7 62 aa7.19□□□□□ -1.26
LIN54-207ENST00000508171 FAM19A1Q7Z5A9 133 aa7.19□□□□□ -1.26
LIN54-207ENST00000508171 COL6A5A8TX70 2615 aa7.19□□□□□ -1.26
LIN54-207ENST00000508171 ELOF1P60002 83 aaKnown RBP7.19□□□□□ -1.26
LIN54-207ENST00000508171 LOC110117498A0A087WWA1 95 aa7.18□□□□□ -1.26
LIN54-207ENST00000508171 USP17L23D6RBM5 183 aa7.18□□□□□ -1.26
LIN54-207ENST00000508171 M0R378 163 aa7.18□□□□□ -1.26
LIN54-207ENST00000508171 PRB2P02812 416 aaPredicted RBP7.18□□□□□ -1.26
LIN54-207ENST00000508171 DSCR8Q96T75 97 aa7.18□□□□□ -1.26
LIN54-207ENST00000508171 UBL5Q9BZL1 73 aa7.18□□□□□ -1.26
LIN54-207ENST00000508171 SYCNQ0VAF6 134 aa7.16□□□□□ -1.26
LIN54-207ENST00000508171 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.16□□□□□ -1.26
LIN54-207ENST00000508171 CYSTM1Q9H1C7 97 aa7.16□□□□□ -1.26
LIN54-207ENST00000508171 TRBV7-6A0A0J9YX20 115 aa7.15□□□□□ -1.26
LIN54-207ENST00000508171 LINC00528Q8N1L1 170 aa7.15□□□□□ -1.26
LIN54-207ENST00000508171 BAHCC1Q9P281 2608 aa7.14□□□□□ -1.27
LIN54-207ENST00000508171 DNAH10OSP0CZ25 163 aa7.14□□□□□ -1.27
LIN54-207ENST00000508171 CASC10Q5T4H9 136 aa7.14□□□□□ -1.27
LIN54-207ENST00000508171 SERTAD4-AS1Q5TG53 156 aa7.14□□□□□ -1.27
LIN54-207ENST00000508171 ATP5EP2Q5VTU8 51 aa7.14□□□□□ -1.27
LIN54-207ENST00000508171 SERP2Q8N6R1 65 aa7.14□□□□□ -1.27
LIN54-207ENST00000508171 CRYGAP11844 174 aa7.14□□□□□ -1.27
LIN54-207ENST00000508171 HAMPP81172 84 aa7.14□□□□□ -1.27
LIN54-207ENST00000508171 LINC00588Q9Y4M8 146 aa7.14□□□□□ -1.27
LIN54-207ENST00000508171 Q6ZVQ6 151 aa7.13□□□□□ -1.27
LIN54-207ENST00000508171 UPK3BQ9BT76 320 aa7.13□□□□□ -1.27
LIN54-207ENST00000508171 TRBV7-4A0A0J9YYF1 115 aa7.13□□□□□ -1.27
LIN54-207ENST00000508171 LINC01547P58512 204 aaPredicted RBP7.13□□□□□ -1.27
LIN54-207ENST00000508171 MRAPQ8TCY5 172 aa7.13□□□□□ -1.27
LIN54-207ENST00000508171 LYSTQ99698 3801 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms