RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 Q6ZQT0 140 aa9.12□□□□□ -0.95
SNCAIP-209ENST00000508017 LINC00482Q8N8I6 264 aa9.12□□□□□ -0.95
SNCAIP-209ENST00000508017 ITPR2Q14571 2701 aa9.1□□□□□ -0.95
SNCAIP-209ENST00000508017 SMIM9A6NGZ8 99 aa9.1□□□□□ -0.95
SNCAIP-209ENST00000508017 KRTAP10-3P60369 221 aa9.1□□□□□ -0.95
SNCAIP-209ENST00000508017 RBM3P98179 157 aaKnown RBP9.1□□□□□ -0.95
SNCAIP-209ENST00000508017 LAMTOR3Q9UHA4 124 aa9.1□□□□□ -0.95
SNCAIP-209ENST00000508017 ZNF561-AS1K7EIQ3 104 aa9.09□□□□□ -0.95
SNCAIP-209ENST00000508017 SPAG11BQ08648 103 aa9.09□□□□□ -0.95
SNCAIP-209ENST00000508017 DEFB135Q30KP9 77 aa9.08□□□□□ -0.96
SNCAIP-209ENST00000508017 C20orf197Q8N268 126 aa9.07□□□□□ -0.96
SNCAIP-209ENST00000508017 TRBV10-3A0A0K0K1G6 114 aa9.07□□□□□ -0.96
SNCAIP-209ENST00000508017 CYSRT1A8MQ03 144 aa9.07□□□□□ -0.96
SNCAIP-209ENST00000508017 Q6ZQY7 126 aa9.07□□□□□ -0.96
SNCAIP-209ENST00000508017 LOC110117498A0A087WWA1 95 aa9.06□□□□□ -0.96
SNCAIP-209ENST00000508017 IGLV6-57P01721 117 aa9.06□□□□□ -0.96
SNCAIP-209ENST00000508017 LYRM9A8MSI8 78 aa9.06□□□□□ -0.96
SNCAIP-209ENST00000508017 LINC01547P58512 204 aaPredicted RBP9.05□□□□□ -0.96
SNCAIP-209ENST00000508017 CELA1Q9UNI1 258 aa9.05□□□□□ -0.96
SNCAIP-209ENST00000508017 HAMPP81172 84 aa9.05□□□□□ -0.96
SNCAIP-209ENST00000508017 Q6ZVQ6 151 aa9.05□□□□□ -0.96
SNCAIP-209ENST00000508017 C5orf47Q569G3 176 aa9.04□□□□□ -0.96
SNCAIP-209ENST00000508017 HIVEP2P31629 2446 aa9.04□□□□□ -0.96
SNCAIP-209ENST00000508017 DAD1P61803 113 aa9.04□□□□□ -0.96
SNCAIP-209ENST00000508017 XAGE1AQ9HD64 81 aa9.04□□□□□ -0.96
SNCAIP-209ENST00000508017 A0A0J9YWU9 116 aa9.03□□□□□ -0.96
SNCAIP-209ENST00000508017 IGHV4-30-4P0DP06 118 aa9.03□□□□□ -0.96
SNCAIP-209ENST00000508017 HTN3P15516 51 aa9.03□□□□□ -0.96
SNCAIP-209ENST00000508017 KLK12Q9UKR0 248 aa9.03□□□□□ -0.96
SNCAIP-209ENST00000508017 TRAV10A0A0B4J240 114 aa9.03□□□□□ -0.96
SNCAIP-209ENST00000508017 TENM1Q9UKZ4 2725 aa9.02□□□□□ -0.96
SNCAIP-209ENST00000508017 C4orf26Q17RF5 130 aa9.01□□□□□ -0.97
SNCAIP-209ENST00000508017 C6orf48Q9UBA6 75 aa9.01□□□□□ -0.97
SNCAIP-209ENST00000508017 HIVEP1P15822 2718 aa9.01□□□□□ -0.97
SNCAIP-209ENST00000508017 SCXQ7RTU7 201 aa9□□□□□ -0.97
SNCAIP-209ENST00000508017 TRAV7A0A075B6U4 112 aa9□□□□□ -0.97
SNCAIP-209ENST00000508017 NDUFC2-KCTD14E9PQ53 114 aa9□□□□□ -0.97
SNCAIP-209ENST00000508017 Q5XG85 94 aa9□□□□□ -0.97
SNCAIP-209ENST00000508017 MUC7Q8TAX7 377 aa9□□□□□ -0.97
SNCAIP-209ENST00000508017 LELP1Q5T871 98 aa8.99□□□□□ -0.97
SNCAIP-209ENST00000508017 DIRC1Q969H9 104 aa8.99□□□□□ -0.97
SNCAIP-209ENST00000508017 C9orf66Q5T8R8 295 aa8.99□□□□□ -0.97
SNCAIP-209ENST00000508017 SMR3AQ99954 134 aa8.99□□□□□ -0.97
SNCAIP-209ENST00000508017 PRR34Q9NV39 138 aa8.99□□□□□ -0.97
SNCAIP-209ENST00000508017 FAM236DA0A1B0GTK5 79 aa8.97□□□□□ -0.97
SNCAIP-209ENST00000508017 H7BZZ5 65 aa8.97□□□□□ -0.97
SNCAIP-209ENST00000508017 FAM236CP0DP71 79 aa8.97□□□□□ -0.97
SNCAIP-209ENST00000508017 Q8NAQ8 132 aa8.97□□□□□ -0.97
SNCAIP-209ENST00000508017 SNURFQ9Y675 71 aa8.97□□□□□ -0.97
SNCAIP-209ENST00000508017 ZNF73O43830 326 aaPredicted RBP8.96□□□□□ -0.97
SNCAIP-209ENST00000508017 GVQW2A0A096LPI5 108 aaPredicted RBP8.96□□□□□ -0.98
SNCAIP-209ENST00000508017 COX7BP24311 80 aa8.96□□□□□ -0.98
SNCAIP-209ENST00000508017 HRCT1Q6UXD1 115 aa8.96□□□□□ -0.98
SNCAIP-209ENST00000508017 TRBV7-4A0A0J9YYF1 115 aa8.95□□□□□ -0.98
SNCAIP-209ENST00000508017 HIGD2BQ4VC39 106 aa8.95□□□□□ -0.98
SNCAIP-209ENST00000508017 RMI2Q96E14 147 aa8.95□□□□□ -0.98
SNCAIP-209ENST00000508017 CXCL6P80162 114 aa8.95□□□□□ -0.98
SNCAIP-209ENST00000508017 PDE6GP18545 87 aa8.94□□□□□ -0.98
SNCAIP-209ENST00000508017 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.94□□□□□ -0.98
SNCAIP-209ENST00000508017 TRRAPQ9Y4A5 3859 aa8.94□□□□□ -0.98
SNCAIP-209ENST00000508017 BCE1O60756 84 aa8.94□□□□□ -0.98
SNCAIP-209ENST00000508017 APOC4P55056 127 aa8.94□□□□□ -0.98
SNCAIP-209ENST00000508017 ELOF1P60002 83 aaKnown RBP8.94□□□□□ -0.98
SNCAIP-209ENST00000508017 PKD1L1Q8TDX9 2849 aa8.93□□□□□ -0.98
SNCAIP-209ENST00000508017 UNC79Q9P2D8 2635 aa8.93□□□□□ -0.98
SNCAIP-209ENST00000508017 TM2D3Q9BRN9 247 aa8.93□□□□□ -0.98
SNCAIP-209ENST00000508017 SPART-AS1P0CW21 52 aa8.92□□□□□ -0.98
SNCAIP-209ENST00000508017 VPREB1P12018 145 aa8.92□□□□□ -0.98
SNCAIP-209ENST00000508017 KLKP1Q107X0 134 aa8.92□□□□□ -0.98
SNCAIP-209ENST00000508017 FASNP49327 2511 aaKnown RBP8.92□□□□□ -0.98
SNCAIP-209ENST00000508017 H3BQ85 93 aa8.91□□□□□ -0.98
SNCAIP-209ENST00000508017 MIFP14174 115 aa8.91□□□□□ -0.98
SNCAIP-209ENST00000508017 WFDC10BQ8IUB3 73 aa8.9□□□□□ -0.98
SNCAIP-209ENST00000508017 CAMK2N2Q96S95 79 aa8.9□□□□□ -0.98
SNCAIP-209ENST00000508017 HELZ2Q9BYK8 2649 aaKnown RBP8.9□□□□□ -0.99
SNCAIP-209ENST00000508017 F8WEM9 126 aa8.9□□□□□ -0.99
SNCAIP-209ENST00000508017 NOTCH2Q04721 2471 aa8.89□□□□□ -0.99
SNCAIP-209ENST00000508017 TRBV7-6A0A0J9YX20 115 aa8.89□□□□□ -0.99
SNCAIP-209ENST00000508017 Q6ZRU5 148 aa8.89□□□□□ -0.99
SNCAIP-209ENST00000508017 Q8N9L7 120 aa8.89□□□□□ -0.99
SNCAIP-209ENST00000508017 EPM2AB3EWF7 344 aa8.89□□□□□ -0.99
SNCAIP-209ENST00000508017 SERP1Q9Y6X1 66 aa8.89□□□□□ -0.99
SNCAIP-209ENST00000508017 ATRQ13535 2644 aa8.88□□□□□ -0.99
SNCAIP-209ENST00000508017 LINC00528Q8N1L1 170 aa8.88□□□□□ -0.99
SNCAIP-209ENST00000508017 KRTAP26-1Q6PEX3 210 aa8.87□□□□□ -0.99
SNCAIP-209ENST00000508017 OTOGQ6ZRI0 2925 aa8.86□□□□□ -0.99
SNCAIP-209ENST00000508017 M0R378 163 aa8.86□□□□□ -0.99
SNCAIP-209ENST00000508017 C15orf56Q8N910 161 aa8.86□□□□□ -0.99
SNCAIP-209ENST00000508017 NREPQ16612 68 aa8.85□□□□□ -0.99
SNCAIP-209ENST00000508017 TEP1Q99973 2627 aaKnown RBP8.85□□□□□ -0.99
SNCAIP-209ENST00000508017 EGFEM1PQ0D2K5 195 aa8.85□□□□□ -0.99
SNCAIP-209ENST00000508017 BPY2O14599 106 aa8.84□□□□□ -0.99
SNCAIP-209ENST00000508017 WIPF1O43516 503 aa8.83□□□□□ -1
SNCAIP-209ENST00000508017 Q6ZRP5 223 aa8.83□□□□□ -1
SNCAIP-209ENST00000508017 NSD1Q96L73 2696 aaPredicted RBP8.82□□□□□ -1
SNCAIP-209ENST00000508017 IGKV4-1P06312 121 aa8.82□□□□□ -1
SNCAIP-209ENST00000508017 C3orf84H3BNL1 204 aa8.82□□□□□ -1
SNCAIP-209ENST00000508017 KPRPQ5T749 579 aaPredicted RBP8.82□□□□□ -1
SNCAIP-209ENST00000508017 DEFB105AQ8NG35 78 aa8.81□□□□□ -1
SNCAIP-209ENST00000508017 RETNQ9HD89 108 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms