RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 TRAV10A0A0B4J240 114 aa4.29□□□□□ -1.72
KDM3B-204ENST00000507996 IGHV3-38A0A0C4DH36 116 aa4.29□□□□□ -1.72
KDM3B-204ENST00000507996 LINC01547P58512 204 aaPredicted RBP4.29□□□□□ -1.72
KDM3B-204ENST00000507996 Q6ZQT0 140 aa4.29□□□□□ -1.72
KDM3B-204ENST00000507996 DYNLRB2Q8TF09 96 aa4.29□□□□□ -1.72
KDM3B-204ENST00000507996 X6R8D5 127 aa4.29□□□□□ -1.72
KDM3B-204ENST00000507996 FAM229AH3BQW9 127 aa4.28□□□□□ -1.72
KDM3B-204ENST00000507996 K7EMT4 169 aa4.28□□□□□ -1.72
KDM3B-204ENST00000507996 Q6ZTC4 211 aa4.28□□□□□ -1.72
KDM3B-204ENST00000507996 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.28□□□□□ -1.72
KDM3B-204ENST00000507996 RPL36AP83881 106 aaKnown RBP4.28□□□□□ -1.72
KDM3B-204ENST00000507996 C9orf66Q5T8R8 295 aa4.28□□□□□ -1.72
KDM3B-204ENST00000507996 RPL36ALQ969Q0 106 aaKnown RBP4.28□□□□□ -1.72
KDM3B-204ENST00000507996 Q8N814 137 aa4.27□□□□□ -1.73
KDM3B-204ENST00000507996 PLA2G2DQ9UNK4 145 aa4.27□□□□□ -1.73
KDM3B-204ENST00000507996 TRBV6-4A0A1B0GX49 114 aa4.27□□□□□ -1.73
KDM3B-204ENST00000507996 IGKV3-20P01619 116 aa4.27□□□□□ -1.73
KDM3B-204ENST00000507996 KRTAP24-1Q3LI83 254 aa4.27□□□□□ -1.73
KDM3B-204ENST00000507996 C6orf223Q8N319 242 aa4.27□□□□□ -1.73
KDM3B-204ENST00000507996 TMEM254Q8TBM7 123 aa4.27□□□□□ -1.73
KDM3B-204ENST00000507996 H3BS24 57 aa4.27□□□□□ -1.73
KDM3B-204ENST00000507996 CCL18P55774 89 aa4.27□□□□□ -1.73
KDM3B-204ENST00000507996 NOTCH1P46531 2555 aa4.26□□□□□ -1.73
KDM3B-204ENST00000507996 IGHV3-53P01767 116 aa4.26□□□□□ -1.73
KDM3B-204ENST00000507996 PDE6GP18545 87 aa4.26□□□□□ -1.73
KDM3B-204ENST00000507996 NREPQ16612 68 aa4.26□□□□□ -1.73
KDM3B-204ENST00000507996 Q6ZVQ6 151 aa4.26□□□□□ -1.73
KDM3B-204ENST00000507996 H3BQ85 93 aa4.26□□□□□ -1.73
KDM3B-204ENST00000507996 PRYO14603 147 aa4.26□□□□□ -1.73
KDM3B-204ENST00000507996 PAX4O43316 350 aa4.26□□□□□ -1.73
KDM3B-204ENST00000507996 SLPIP03973 132 aa4.26□□□□□ -1.73
KDM3B-204ENST00000507996 TM2D3Q9BRN9 247 aa4.26□□□□□ -1.73
KDM3B-204ENST00000507996 FBN1P35555 2871 aaKnown RBP4.25□□□□□ -1.73
KDM3B-204ENST00000507996 hDV103S1A0JD37 113 aa4.25□□□□□ -1.73
KDM3B-204ENST00000507996 K7EQD1 137 aa4.25□□□□□ -1.73
KDM3B-204ENST00000507996 LCE2CQ5TA81 110 aa4.25□□□□□ -1.73
KDM3B-204ENST00000507996 TENM1Q9UKZ4 2725 aa4.25□□□□□ -1.73
KDM3B-204ENST00000507996 A8MTW9 85 aa4.25□□□□□ -1.73
KDM3B-204ENST00000507996 K7EQG2 157 aa4.25□□□□□ -1.73
KDM3B-204ENST00000507996 MPLKIPQ8TAP9 179 aa4.25□□□□□ -1.73
KDM3B-204ENST00000507996 COX7B2Q8TF08 81 aa4.25□□□□□ -1.73
KDM3B-204ENST00000507996 FUSP35637 526 aaKnown RBP eCLIP4.24□□□□□ -1.73
KDM3B-204ENST00000507996 DEFB114Q30KQ6 69 aa4.24□□□□□ -1.73
KDM3B-204ENST00000507996 Q8N3U1 123 aa4.24□□□□□ -1.73
KDM3B-204ENST00000507996 SPATA3Q8NHX4 192 aa4.24□□□□□ -1.73
KDM3B-204ENST00000507996 LCE6AA0A183 80 aa4.24□□□□□ -1.73
KDM3B-204ENST00000507996 DEFB131AP59861 70 aa4.24□□□□□ -1.73
KDM3B-204ENST00000507996 NANOS2P60321 138 aaKnown RBP4.24□□□□□ -1.73
KDM3B-204ENST00000507996 Q6ZSN1 163 aa4.24□□□□□ -1.73
KDM3B-204ENST00000507996 STHQ8IWL8 128 aa4.24□□□□□ -1.73
KDM3B-204ENST00000507996 CDC42SE2Q9NRR3 84 aa4.24□□□□□ -1.73
KDM3B-204ENST00000507996 TRRAPQ9Y4A5 3859 aa4.23□□□□□ -1.73
KDM3B-204ENST00000507996 Q6ZTI0 123 aa4.23□□□□□ -1.73
KDM3B-204ENST00000507996 OCR1Q9BZK8 76 aa4.23□□□□□ -1.73
KDM3B-204ENST00000507996 C11orf68Q9H3H3 251 aaKnown RBP4.23□□□□□ -1.73
KDM3B-204ENST00000507996 Q6ZRP5 223 aa4.22□□□□□ -1.73
KDM3B-204ENST00000507996 RETNQ9HD89 108 aa4.22□□□□□ -1.73
KDM3B-204ENST00000507996 LYRM9A8MSI8 78 aa4.22□□□□□ -1.73
KDM3B-204ENST00000507996 Q9UF83 564 aa4.22□□□□□ -1.73
KDM3B-204ENST00000507996 VWFP04275 2813 aa4.22□□□□□ -1.73
KDM3B-204ENST00000507996 BPY2O14599 106 aa4.21□□□□□ -1.73
KDM3B-204ENST00000507996 HTN1P15515 57 aa4.21□□□□□ -1.73
KDM3B-204ENST00000507996 DAD1P61803 113 aa4.21□□□□□ -1.73
KDM3B-204ENST00000507996 NTM-AS1Q6ZSK4 140 aa4.21□□□□□ -1.73
KDM3B-204ENST00000507996 WFDC10AQ9H1F0 79 aa4.21□□□□□ -1.73
KDM3B-204ENST00000507996 TRBV10-1A0A0K0K1A3 114 aa4.21□□□□□ -1.74
KDM3B-204ENST00000507996 SPINK13Q1W4C9 94 aa4.21□□□□□ -1.74
KDM3B-204ENST00000507996 KTN1-AS1Q86SY8 53 aa4.21□□□□□ -1.74
KDM3B-204ENST00000507996 MAP6D1Q9H9H5 199 aa4.21□□□□□ -1.74
KDM3B-204ENST00000507996 LINC00158P58513 81 aa4.21□□□□□ -1.74
KDM3B-204ENST00000507996 NBEAL2Q6ZNJ1 2754 aa4.21□□□□□ -1.74
KDM3B-204ENST00000507996 IGHV3-73A0A0B4J1V6 119 aa4.2□□□□□ -1.74
KDM3B-204ENST00000507996 IGLV1-51P01701 117 aa4.2□□□□□ -1.74
KDM3B-204ENST00000507996 LINC00575Q6W349 94 aa4.2□□□□□ -1.74
KDM3B-204ENST00000507996 MRPL55Q7Z7F7 128 aaKnown RBP4.2□□□□□ -1.74
KDM3B-204ENST00000507996 HAMPP81172 84 aa4.2□□□□□ -1.74
KDM3B-204ENST00000507996 CYP4F30PQ9H0H9 118 aa4.2□□□□□ -1.74
KDM3B-204ENST00000507996 ODF3L2Q3SX64 289 aa4.19□□□□□ -1.74
KDM3B-204ENST00000507996 M0R2N4 97 aa4.19□□□□□ -1.74
KDM3B-204ENST00000507996 LINC00588Q9Y4M8 146 aa4.19□□□□□ -1.74
KDM3B-204ENST00000507996 A0A087WZ39 114 aa4.19□□□□□ -1.74
KDM3B-204ENST00000507996 IGHV3OR16-9A0A0B4J2B5 98 aa4.18□□□□□ -1.74
KDM3B-204ENST00000507996 PRM2P04554 102 aa4.18□□□□□ -1.74
KDM3B-204ENST00000507996 IGKV4-1P06312 121 aa4.18□□□□□ -1.74
KDM3B-204ENST00000507996 UBE2BP63146 152 aa4.18□□□□□ -1.74
KDM3B-204ENST00000507996 MUC7Q8TAX7 377 aa4.18□□□□□ -1.74
KDM3B-204ENST00000507996 LCE2AQ5TA79 106 aaPredicted RBP4.18□□□□□ -1.74
KDM3B-204ENST00000507996 CD164L2Q6UWJ8 174 aa4.18□□□□□ -1.74
KDM3B-204ENST00000507996 ZCCHC13Q8WW36 166 aaKnown RBP4.18□□□□□ -1.74
KDM3B-204ENST00000507996 RBM12B-AS1Q9P1G2 102 aa4.18□□□□□ -1.74
KDM3B-204ENST00000507996 TRAV22A0A0B4J277 110 aa4.17□□□□□ -1.74
KDM3B-204ENST00000507996 NDUFS5O43920 106 aa4.17□□□□□ -1.74
KDM3B-204ENST00000507996 COX17Q14061 63 aa4.17□□□□□ -1.74
KDM3B-204ENST00000507996 PHF5AQ7RTV0 110 aaKnown RBP4.16□□□□□ -1.74
KDM3B-204ENST00000507996 C1orf64Q8NEQ6 169 aa4.16□□□□□ -1.74
KDM3B-204ENST00000507996 SYCNQ0VAF6 134 aa4.16□□□□□ -1.74
KDM3B-204ENST00000507996 Q8IZM0 81 aa4.15□□□□□ -1.74
KDM3B-204ENST00000507996 CMC4P56277 68 aaPredicted RBP4.15□□□□□ -1.75
KDM3B-204ENST00000507996 HIGD2AQ9BW72 106 aa4.15□□□□□ -1.75
KDM3B-204ENST00000507996 C19orf73Q9NVV2 129 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms