RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 BIN3Q9NQY0 253 aa4.33□□□□□ -1.72
PFDN1-202ENST00000507185 MED9Q9NWA0 146 aa4.33□□□□□ -1.72
PFDN1-202ENST00000507185 CARHSP1Q9Y2V2 147 aaKnown RBP4.33□□□□□ -1.72
PFDN1-202ENST00000507185 FSIP2Q5CZC0 6907 aa4.32□□□□□ -1.72
PFDN1-202ENST00000507185 ESDP10768 282 aa4.32□□□□□ -1.72
PFDN1-202ENST00000507185 UNQ6190/PRO20217Q6UXQ8 127 aa4.32□□□□□ -1.72
PFDN1-202ENST00000507185 Q6ZUT4 128 aa4.32□□□□□ -1.72
PFDN1-202ENST00000507185 MBD3L1Q8WWY6 194 aa4.32□□□□□ -1.72
PFDN1-202ENST00000507185 BORCS7Q96B45 105 aa4.32□□□□□ -1.72
PFDN1-202ENST00000507185 MANBALQ9NQG1 85 aa4.32□□□□□ -1.72
PFDN1-202ENST00000507185 CYTL1Q9NRR1 136 aa4.32□□□□□ -1.72
PFDN1-202ENST00000507185 CRCT1Q9UGL9 99 aa4.32□□□□□ -1.72
PFDN1-202ENST00000507185 UMAD1C9J7I0 102 aa4.31□□□□□ -1.72
PFDN1-202ENST00000507185 G3V3Q6 166 aa4.31□□□□□ -1.72
PFDN1-202ENST00000507185 CRYGAP11844 174 aa4.31□□□□□ -1.72
PFDN1-202ENST00000507185 CCL20P78556 96 aa4.31□□□□□ -1.72
PFDN1-202ENST00000507185 SMAGPQ0VAQ4 97 aa4.31□□□□□ -1.72
PFDN1-202ENST00000507185 COX19Q49B96 90 aa4.31□□□□□ -1.72
PFDN1-202ENST00000507185 LINC00299Q6ZSB3 139 aa4.31□□□□□ -1.72
PFDN1-202ENST00000507185 OR10D4PQ8NGN7 298 aa4.31□□□□□ -1.72
PFDN1-202ENST00000507185 MRPL35Q9NZE8 188 aaKnown RBP4.31□□□□□ -1.72
PFDN1-202ENST00000507185 C6orf48Q9UBA6 75 aa4.31□□□□□ -1.72
PFDN1-202ENST00000507185 TINCRA0A1B0GVN0 87 aa4.3□□□□□ -1.72
PFDN1-202ENST00000507185 TMEM223A0PJW6 202 aa4.3□□□□□ -1.72
PFDN1-202ENST00000507185 RGS21Q2M5E4 152 aa4.3□□□□□ -1.72
PFDN1-202ENST00000507185 PDZD11Q5EBL8 140 aa4.3□□□□□ -1.72
PFDN1-202ENST00000507185 FAM231DQ6ZW35 169 aa4.3□□□□□ -1.72
PFDN1-202ENST00000507185 SMDT1Q9H4I9 107 aa4.3□□□□□ -1.72
PFDN1-202ENST00000507185 ANAPC11Q9NYG5 84 aa4.3□□□□□ -1.72
PFDN1-202ENST00000507185 TRBV20OR9-2A0A075B6H5 130 aa4.29□□□□□ -1.72
PFDN1-202ENST00000507185 KANTRA0A1W2PQU2 76 aa4.29□□□□□ -1.72
PFDN1-202ENST00000507185 C8orf87E5RJ46 101 aa4.29□□□□□ -1.72
PFDN1-202ENST00000507185 PDE6DO43924 150 aa4.29□□□□□ -1.72
PFDN1-202ENST00000507185 TMEM241Q24JQ0 296 aa4.29□□□□□ -1.72
PFDN1-202ENST00000507185 SMIM12Q96EX1 92 aa4.29□□□□□ -1.72
PFDN1-202ENST00000507185 PACRGQ96M98 296 aaPredicted RBP4.29□□□□□ -1.72
PFDN1-202ENST00000507185 UBE2D4Q9Y2X8 147 aa4.29□□□□□ -1.72
PFDN1-202ENST00000507185 TRBV6-5A0A0K0K1A5 114 aa4.28□□□□□ -1.72
PFDN1-202ENST00000507185 RPL28P46779 137 aaKnown RBP4.28□□□□□ -1.72
PFDN1-202ENST00000507185 CEBPGP53567 150 aa4.28□□□□□ -1.72
PFDN1-202ENST00000507185 DEFB116Q30KQ4 102 aa4.28□□□□□ -1.72
PFDN1-202ENST00000507185 LINC00304Q8N9R0 145 aa4.28□□□□□ -1.72
PFDN1-202ENST00000507185 CNFNQ9BYD5 112 aa4.28□□□□□ -1.72
PFDN1-202ENST00000507185 SND1-IT1Q9HBX3 110 aa4.28□□□□□ -1.72
PFDN1-202ENST00000507185 SPANXB1Q9NS25 103 aaPredicted RBP4.28□□□□□ -1.72
PFDN1-202ENST00000507185 TGIF2-C20orf24A0A0A6YYL0 155 aa4.27□□□□□ -1.73
PFDN1-202ENST00000507185 C2orf82Q6UX34 121 aa4.27□□□□□ -1.73
PFDN1-202ENST00000507185 AMN1Q8IY45 258 aa4.27□□□□□ -1.73
PFDN1-202ENST00000507185 PRO0461Q9UI25 63 aa4.27□□□□□ -1.73
PFDN1-202ENST00000507185 ZNF706Q9Y5V0 76 aaPredicted RBP4.27□□□□□ -1.73
PFDN1-202ENST00000507185 TRBV27A0A0K0K1C4 114 aa4.26□□□□□ -1.73
PFDN1-202ENST00000507185 NUPR1O60356 82 aa4.26□□□□□ -1.73
PFDN1-202ENST00000507185 POLR2KP53803 58 aaKnown RBP4.26□□□□□ -1.73
PFDN1-202ENST00000507185 RPL39P62891 51 aaKnown RBP4.26□□□□□ -1.73
PFDN1-202ENST00000507185 HBBP68871 147 aa4.26□□□□□ -1.73
PFDN1-202ENST00000507185 XAGE1AQ9HD64 81 aa4.26□□□□□ -1.73
PFDN1-202ENST00000507185 TOMM7Q9P0U1 55 aa4.26□□□□□ -1.73
PFDN1-202ENST00000507185 C22orf24Q9Y442 160 aa4.26□□□□□ -1.73
PFDN1-202ENST00000507185 IGKV2D-26A0A0A0MRZ7 120 aa4.25□□□□□ -1.73
PFDN1-202ENST00000507185 A8MWL6 223 aa4.25□□□□□ -1.73
PFDN1-202ENST00000507185 TPRXLQ17RH7 258 aa4.25□□□□□ -1.73
PFDN1-202ENST00000507185 ANAPC13Q9BS18 74 aa4.25□□□□□ -1.73
PFDN1-202ENST00000507185 TRBV30A0A0K0K1B3 111 aa4.24□□□□□ -1.73
PFDN1-202ENST00000507185 A0A1B0GUT8 65 aa4.24□□□□□ -1.73
PFDN1-202ENST00000507185 BCE1O60756 84 aa4.24□□□□□ -1.73
PFDN1-202ENST00000507185 CKS1BP61024 79 aa4.24□□□□□ -1.73
PFDN1-202ENST00000507185 LUZP6Q538Z0 58 aa4.24□□□□□ -1.73
PFDN1-202ENST00000507185 ORMDL3Q8N138 153 aa4.24□□□□□ -1.73
PFDN1-202ENST00000507185 MUC17Q685J3 4493 aa4.24□□□□□ -1.73
PFDN1-202ENST00000507185 ZNF727A8MUV8 499 aa4.23□□□□□ -1.73
PFDN1-202ENST00000507185 HIGD1CA8MV81 97 aa4.23□□□□□ -1.73
PFDN1-202ENST00000507185 PPP1R17O96001 155 aa4.23□□□□□ -1.73
PFDN1-202ENST00000507185 ZNF345Q14585 488 aa4.23□□□□□ -1.73
PFDN1-202ENST00000507185 KRTAP13-2Q52LG2 175 aa4.23□□□□□ -1.73
PFDN1-202ENST00000507185 LINC01551Q86U37 167 aa4.23□□□□□ -1.73
PFDN1-202ENST00000507185 TMEM191AQ9H0A3 160 aa4.23□□□□□ -1.73
PFDN1-202ENST00000507185 SCO1O75880 301 aa4.22□□□□□ -1.73
PFDN1-202ENST00000507185 FA2HQ7L5A8 372 aa4.22□□□□□ -1.73
PFDN1-202ENST00000507185 YPEL4Q96NS1 127 aa4.22□□□□□ -1.73
PFDN1-202ENST00000507185 TIMM21Q9BVV7 248 aa4.22□□□□□ -1.73
PFDN1-202ENST00000507185 SPANXA1Q9NS26 97 aa4.22□□□□□ -1.73
PFDN1-202ENST00000507185 CKS2P33552 79 aa4.21□□□□□ -1.74
PFDN1-202ENST00000507185 FAM19A3Q7Z5A8 133 aa4.21□□□□□ -1.74
PFDN1-202ENST00000507185 SCGB1C2P0DMR2 95 aa4.2□□□□□ -1.74
PFDN1-202ENST00000507185 IFI27P40305 119 aaPredicted RBP4.2□□□□□ -1.74
PFDN1-202ENST00000507185 MRPL51Q4U2R6 128 aaKnown RBP4.2□□□□□ -1.74
PFDN1-202ENST00000507185 Q5W150 140 aa4.2□□□□□ -1.74
PFDN1-202ENST00000507185 MAP1LC3AQ9H492 121 aa4.2□□□□□ -1.74
PFDN1-202ENST00000507185 BATF3Q9NR55 127 aa4.2□□□□□ -1.74
PFDN1-202ENST00000507185 IGKV2-28A0A075B6P5 120 aa4.19□□□□□ -1.74
PFDN1-202ENST00000507185 C9JQL5 133 aa4.19□□□□□ -1.74
PFDN1-202ENST00000507185 IGKV2D-28P01615 120 aa4.19□□□□□ -1.74
PFDN1-202ENST00000507185 PRLHP81277 87 aa4.19□□□□□ -1.74
PFDN1-202ENST00000507185 LINC00167Q96N53 147 aa4.19□□□□□ -1.74
PFDN1-202ENST00000507185 C2orf88Q9BSF0 95 aa4.19□□□□□ -1.74
PFDN1-202ENST00000507185 HMSDA8MTL9 139 aa4.18□□□□□ -1.74
PFDN1-202ENST00000507185 MRPS36P82909 103 aaKnown RBP4.18□□□□□ -1.74
PFDN1-202ENST00000507185 FAM229BQ4G0N7 80 aa4.18□□□□□ -1.74
PFDN1-202ENST00000507185 C3orf22Q8N5N4 141 aa4.18□□□□□ -1.74
PFDN1-202ENST00000507185 SMIM7Q9BQ49 75 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms