RNA–Protein interactions for RNA: ENST00000505507.6

PDE4D-213, Transcript of phosphodiesterase 4D, humanhuman

TSL 4

Gene PDE4D, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-213ENST00000505507 CXCL5P42830 114 aa2.37□□□□□ -2.03
PDE4D-213ENST00000505507 HERVK_113P61574 105 aa2.37□□□□□ -2.03
PDE4D-213ENST00000505507 SYCNQ0VAF6 134 aa2.37□□□□□ -2.03
PDE4D-213ENST00000505507 TMEM170BQ5T4T1 132 aa2.37□□□□□ -2.03
PDE4D-213ENST00000505507 ORAOV1Q8WV07 137 aa2.37□□□□□ -2.03
PDE4D-213ENST00000505507 CAMK2N2Q96S95 79 aa2.37□□□□□ -2.03
PDE4D-213ENST00000505507 IGLV4-69A0A075B6H9 119 aa2.36□□□□□ -2.03
PDE4D-213ENST00000505507 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.36□□□□□ -2.03
PDE4D-213ENST00000505507 A0A096LNJ9 63 aa2.36□□□□□ -2.03
PDE4D-213ENST00000505507 LINC00587B1AMM8 73 aa2.36□□□□□ -2.03
PDE4D-213ENST00000505507 SYS1-DBNDD2H3BUS1 97 aa2.36□□□□□ -2.03
PDE4D-213ENST00000505507 NDUFA1O15239 70 aa2.36□□□□□ -2.03
PDE4D-213ENST00000505507 NUPR1O60356 82 aa2.36□□□□□ -2.03
PDE4D-213ENST00000505507 IGLC3P0DOY3 106 aa2.36□□□□□ -2.03
PDE4D-213ENST00000505507 NMUP48645 174 aa2.36□□□□□ -2.03
PDE4D-213ENST00000505507 KRTDAPP60985 99 aa2.36□□□□□ -2.03
PDE4D-213ENST00000505507 CNBPP62633 177 aaKnown RBP2.36□□□□□ -2.03
PDE4D-213ENST00000505507 COX6A2Q02221 97 aa2.36□□□□□ -2.03
PDE4D-213ENST00000505507 SPAG11BQ08648 103 aa2.36□□□□□ -2.03
PDE4D-213ENST00000505507 KRTAP26-1Q6PEX3 210 aa2.36□□□□□ -2.03
PDE4D-213ENST00000505507 Q8IZM0 81 aa2.36□□□□□ -2.03
PDE4D-213ENST00000505507 CARD19Q96LW7 228 aa2.36□□□□□ -2.03
PDE4D-213ENST00000505507 CHAC1Q9BUX1 264 aa2.36□□□□□ -2.03
PDE4D-213ENST00000505507 TOMM7Q9P0U1 55 aa2.36□□□□□ -2.03
PDE4D-213ENST00000505507 LINC00474Q9P2X8 69 aa2.36□□□□□ -2.03
PDE4D-213ENST00000505507 CDKN2A-AS1Q9UH64 79 aa2.36□□□□□ -2.03
PDE4D-213ENST00000505507 CSMD3Q7Z407 3707 aa2.35□□□□□ -2.03
PDE4D-213ENST00000505507 TRBV30A0A0K0K1B3 111 aa2.35□□□□□ -2.03
PDE4D-213ENST00000505507 LOC107984640A0A0U1RRK4 108 aa2.35□□□□□ -2.03
PDE4D-213ENST00000505507 C11orf86A6NJI1 115 aa2.35□□□□□ -2.03
PDE4D-213ENST00000505507 HSBP1L1C9JCN9 74 aa2.35□□□□□ -2.03
PDE4D-213ENST00000505507 ZNF861PO60384 105 aa2.35□□□□□ -2.03
PDE4D-213ENST00000505507 IGKCP01834 107 aa2.35□□□□□ -2.03
PDE4D-213ENST00000505507 SPINK8P0C7L1 97 aa2.35□□□□□ -2.03
PDE4D-213ENST00000505507 C9orf163Q8N9P6 203 aa2.35□□□□□ -2.03
PDE4D-213ENST00000505507 COX7B2Q8TF08 81 aa2.35□□□□□ -2.03
PDE4D-213ENST00000505507 FAM104AQ969W3 186 aa2.35□□□□□ -2.03
PDE4D-213ENST00000505507 PLEKHB2Q96CS7 222 aa2.35□□□□□ -2.03
PDE4D-213ENST00000505507 MRPL35Q9NZE8 188 aaKnown RBP2.35□□□□□ -2.03
PDE4D-213ENST00000505507 MYMXA0A1B0GTQ4 84 aa2.34□□□□□ -2.03
PDE4D-213ENST00000505507 A0A1B0GVY2 172 aa2.34□□□□□ -2.03
PDE4D-213ENST00000505507 A6NDN8 102 aa2.34□□□□□ -2.03
PDE4D-213ENST00000505507 PANO1I0J062 215 aa2.34□□□□□ -2.03
PDE4D-213ENST00000505507 C3orf79P0CE67 100 aa2.34□□□□□ -2.03
PDE4D-213ENST00000505507 ZNF22P17026 224 aaPredicted RBP2.34□□□□□ -2.03
PDE4D-213ENST00000505507 LGALS3P17931 250 aaKnown RBP2.34□□□□□ -2.03
PDE4D-213ENST00000505507 CIRBPQ14011 172 aaKnown RBP2.34□□□□□ -2.03
PDE4D-213ENST00000505507 COX17Q14061 63 aa2.34□□□□□ -2.03
PDE4D-213ENST00000505507 LINC01545Q5VT33 79 aa2.34□□□□□ -2.03
PDE4D-213ENST00000505507 HIST3H2BBQ8N257 126 aa2.34□□□□□ -2.03
PDE4D-213ENST00000505507 C15orf56Q8N910 161 aa2.34□□□□□ -2.03
PDE4D-213ENST00000505507 DYNC2H1Q8NCM8 4307 aaKnown RBP2.33□□□□□ -2.04
PDE4D-213ENST00000505507 TMEM223A0PJW6 202 aa2.33□□□□□ -2.04
PDE4D-213ENST00000505507 LEPROTO15243 131 aa2.33□□□□□ -2.04
PDE4D-213ENST00000505507 RPL18AQ02543 176 aaKnown RBP2.33□□□□□ -2.04
PDE4D-213ENST00000505507 WFDC2Q14508 124 aa2.33□□□□□ -2.04
PDE4D-213ENST00000505507 UNQ6190/PRO20217Q6UXQ8 127 aa2.33□□□□□ -2.04
PDE4D-213ENST00000505507 COPS9Q8WXC6 57 aa2.33□□□□□ -2.04
PDE4D-213ENST00000505507 LINC00526Q96FQ7 95 aa2.33□□□□□ -2.04
PDE4D-213ENST00000505507 HIST1H2BLQ99880 126 aa2.33□□□□□ -2.04
PDE4D-213ENST00000505507 ALMS1Q8TCU4 4167 aa2.33□□□□□ -2.04
PDE4D-213ENST00000505507 OBSCNQ5VST9 7968 aa2.32□□□□□ -2.04
PDE4D-213ENST00000505507 IGKV2-24A0A0C4DH68 120 aa2.32□□□□□ -2.04
PDE4D-213ENST00000505507 NDUFC2-KCTD14E9PQ53 114 aa2.32□□□□□ -2.04
PDE4D-213ENST00000505507 J3QQQ9 107 aa2.32□□□□□ -2.04
PDE4D-213ENST00000505507 TLX1NBP0CAT3 122 aa2.32□□□□□ -2.04
PDE4D-213ENST00000505507 LINC00158P58513 81 aa2.32□□□□□ -2.04
PDE4D-213ENST00000505507 MEIG1Q5JSS6 88 aa2.32□□□□□ -2.04
PDE4D-213ENST00000505507 C2orf82Q6UX34 121 aa2.32□□□□□ -2.04
PDE4D-213ENST00000505507 SDIM1Q6ZPB5 146 aa2.32□□□□□ -2.04
PDE4D-213ENST00000505507 Q6ZRU5 148 aa2.32□□□□□ -2.04
PDE4D-213ENST00000505507 MRPL55Q7Z7F7 128 aaKnown RBP2.32□□□□□ -2.04
PDE4D-213ENST00000505507 PMCHL2Q9BQD1 86 aa2.32□□□□□ -2.04
PDE4D-213ENST00000505507 NDUFA12Q9UI09 145 aa2.32□□□□□ -2.04
PDE4D-213ENST00000505507 A8MU10 97 aa2.31□□□□□ -2.04
PDE4D-213ENST00000505507 OXTP01178 125 aa2.31□□□□□ -2.04
PDE4D-213ENST00000505507 PFN2P35080 140 aa2.31□□□□□ -2.04
PDE4D-213ENST00000505507 KRTAP10-1P60331 282 aa2.31□□□□□ -2.04
PDE4D-213ENST00000505507 PRR3P79522 188 aaKnown RBP2.31□□□□□ -2.04
PDE4D-213ENST00000505507 S100A12P80511 92 aa2.31□□□□□ -2.04
PDE4D-213ENST00000505507 LCE3CQ5T5A8 94 aa2.31□□□□□ -2.04
PDE4D-213ENST00000505507 SCGB1D4Q6XE38 83 aa2.31□□□□□ -2.04
PDE4D-213ENST00000505507 MIEN1Q9BRT3 115 aa2.31□□□□□ -2.04
PDE4D-213ENST00000505507 C6orf48Q9UBA6 75 aa2.31□□□□□ -2.04
PDE4D-213ENST00000505507 ERG28Q9UKR5 140 aa2.31□□□□□ -2.04
PDE4D-213ENST00000505507 LYSTQ99698 3801 aa2.31□□□□□ -2.04
PDE4D-213ENST00000505507 A0A096LNI7 61 aa2.3□□□□□ -2.04
PDE4D-213ENST00000505507 ZNF815PA8K554 130 aa2.3□□□□□ -2.04
PDE4D-213ENST00000505507 H0Y9J4 135 aa2.3□□□□□ -2.04
PDE4D-213ENST00000505507 FUSP35637 526 aaKnown RBP eCLIP2.3□□□□□ -2.04
PDE4D-213ENST00000505507 UBE2AP49459 152 aa2.3□□□□□ -2.04
PDE4D-213ENST00000505507 JOSD1Q15040 202 aaPredicted RBP2.3□□□□□ -2.04
PDE4D-213ENST00000505507 C9orf116Q5BN46 136 aaPredicted RBP2.3□□□□□ -2.04
PDE4D-213ENST00000505507 PCP2Q8IVA1 136 aa2.3□□□□□ -2.04
PDE4D-213ENST00000505507 ATOH7Q8N100 152 aa2.3□□□□□ -2.04
PDE4D-213ENST00000505507 ZNF625Q96I27 306 aaPredicted RBP2.3□□□□□ -2.04
PDE4D-213ENST00000505507 VAMP8Q9BV40 100 aa2.3□□□□□ -2.04
PDE4D-213ENST00000505507 ANAPC11Q9NYG5 84 aa2.3□□□□□ -2.04
PDE4D-213ENST00000505507 CBY1Q9Y3M2 126 aa2.3□□□□□ -2.04
PDE4D-213ENST00000505507 TMEM238C9JI98 176 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms