RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 KRTAP11-1Q8IUC1 163 aa10.43□□□□□ -0.74
SYNE4-207ENST00000505054 SND1-IT1Q9HBX3 110 aa10.43□□□□□ -0.74
SYNE4-207ENST00000505054 MYMXA0A1B0GTQ4 84 aa10.42□□□□□ -0.74
SYNE4-207ENST00000505054 E9PLD3 99 aa10.42□□□□□ -0.74
SYNE4-207ENST00000505054 S100A2P29034 98 aa10.42□□□□□ -0.74
SYNE4-207ENST00000505054 HERV-K104P63124 156 aa10.42□□□□□ -0.74
SYNE4-207ENST00000505054 A0A0U1RRA0 63 aa10.41□□□□□ -0.74
SYNE4-207ENST00000505054 SNRPEP62304 92 aaKnown RBP10.41□□□□□ -0.74
SYNE4-207ENST00000505054 C22orf24Q9Y442 160 aa10.41□□□□□ -0.74
SYNE4-207ENST00000505054 C20orf202A1L168 122 aa10.4□□□□□ -0.74
SYNE4-207ENST00000505054 SMIM13P0DJ93 91 aa10.4□□□□□ -0.74
SYNE4-207ENST00000505054 LGALS3P17931 250 aaKnown RBP10.4□□□□□ -0.74
SYNE4-207ENST00000505054 LINC00158P58513 81 aa10.4□□□□□ -0.74
SYNE4-207ENST00000505054 PSORS1C2Q9UIG4 136 aa10.4□□□□□ -0.74
SYNE4-207ENST00000505054 C5orf52A6NGY3 159 aa10.39□□□□□ -0.75
SYNE4-207ENST00000505054 NMUP48645 174 aa10.39□□□□□ -0.75
SYNE4-207ENST00000505054 MEIG1Q5JSS6 88 aa10.39□□□□□ -0.75
SYNE4-207ENST00000505054 IGLV5-37A0A075B6J1 123 aa10.38□□□□□ -0.75
SYNE4-207ENST00000505054 Q8NDZ9 215 aa10.38□□□□□ -0.75
SYNE4-207ENST00000505054 TP73-AS1Q9UF72 201 aa10.38□□□□□ -0.75
SYNE4-207ENST00000505054 IGKV2D-26A0A0A0MRZ7 120 aa10.37□□□□□ -0.75
SYNE4-207ENST00000505054 UBE2BP63146 152 aa10.37□□□□□ -0.75
SYNE4-207ENST00000505054 ATOH7Q8N100 152 aa10.37□□□□□ -0.75
SYNE4-207ENST00000505054 VPREB1P12018 145 aa10.36□□□□□ -0.75
SYNE4-207ENST00000505054 MRPL55Q7Z7F7 128 aaKnown RBP10.36□□□□□ -0.75
SYNE4-207ENST00000505054 MIR7-3HGQ8N6C7 128 aa10.36□□□□□ -0.75
SYNE4-207ENST00000505054 LINC00587B1AMM8 73 aa10.35□□□□□ -0.75
SYNE4-207ENST00000505054 LBHQ53QV2 105 aaPredicted RBP10.35□□□□□ -0.75
SYNE4-207ENST00000505054 TNXBP22105 4242 aa10.34□□□□□ -0.75
SYNE4-207ENST00000505054 ANKRD39Q53RE8 183 aa10.34□□□□□ -0.75
SYNE4-207ENST00000505054 C1orf137Q5JT78 98 aa10.34□□□□□ -0.75
SYNE4-207ENST00000505054 NKAPP1Q8N9T2 125 aa10.34□□□□□ -0.75
SYNE4-207ENST00000505054 LINC00167Q96N53 147 aa10.34□□□□□ -0.75
SYNE4-207ENST00000505054 LRP2P98164 4655 aa10.33□□□□□ -0.76
SYNE4-207ENST00000505054 A0A0J9YXY3 114 aa10.33□□□□□ -0.76
SYNE4-207ENST00000505054 DAND5Q8N907 189 aa10.33□□□□□ -0.76
SYNE4-207ENST00000505054 TTTY13Q9BZ97 58 aa10.33□□□□□ -0.76
SYNE4-207ENST00000505054 GAGE10A6NGK3 116 aa10.32□□□□□ -0.76
SYNE4-207ENST00000505054 AKR1D1P51857 326 aa10.32□□□□□ -0.76
SYNE4-207ENST00000505054 RPL24P83731 157 aaKnown RBP10.31□□□□□ -0.76
SYNE4-207ENST00000505054 SRSF9Q13242 221 aaKnown RBP eCLIP10.31□□□□□ -0.76
SYNE4-207ENST00000505054 RPL37AP8A6NKH3 93 aa10.3□□□□□ -0.76
SYNE4-207ENST00000505054 ZNF815PA8K554 130 aa10.3□□□□□ -0.76
SYNE4-207ENST00000505054 BOD1L2Q8IYS8 172 aa10.3□□□□□ -0.76
SYNE4-207ENST00000505054 IGLV7-43P04211 117 aa10.29□□□□□ -0.76
SYNE4-207ENST00000505054 ADAMTSL4-AS1Q5T5F5 129 aa10.29□□□□□ -0.76
SYNE4-207ENST00000505054 SPINK6Q6UWN8 80 aa10.28□□□□□ -0.76
SYNE4-207ENST00000505054 LITAFQ99732 161 aa10.28□□□□□ -0.76
SYNE4-207ENST00000505054 RNF213Q63HN8 5207 aa10.28□□□□□ -0.76
SYNE4-207ENST00000505054 LOC107984156A0A0G2JMH3 177 aa10.27□□□□□ -0.77
SYNE4-207ENST00000505054 ARL17AQ8IVW1 177 aa10.27□□□□□ -0.77
SYNE4-207ENST00000505054 IGKV2-28A0A075B6P5 120 aa10.26□□□□□ -0.77
SYNE4-207ENST00000505054 IGKV2D-28P01615 120 aa10.26□□□□□ -0.77
SYNE4-207ENST00000505054 SOSTDC1Q6X4U4 206 aa10.26□□□□□ -0.77
SYNE4-207ENST00000505054 IGLV1-50A0A075B6I6 118 aa10.25□□□□□ -0.77
SYNE4-207ENST00000505054 EIF4EBP3O60516 100 aaPredicted RBP10.25□□□□□ -0.77
SYNE4-207ENST00000505054 TIMM17BO60830 172 aa10.25□□□□□ -0.77
SYNE4-207ENST00000505054 PCP2Q8IVA1 136 aa10.25□□□□□ -0.77
SYNE4-207ENST00000505054 M0R378 163 aa10.24□□□□□ -0.77
SYNE4-207ENST00000505054 NCR3O14931 201 aa10.24□□□□□ -0.77
SYNE4-207ENST00000505054 SCGB1D1O95968 90 aa10.24□□□□□ -0.77
SYNE4-207ENST00000505054 LINC01600Q96MT4 127 aa10.24□□□□□ -0.77
SYNE4-207ENST00000505054 BCE1O60756 84 aa10.23□□□□□ -0.77
SYNE4-207ENST00000505054 NPC2P61916 151 aa10.23□□□□□ -0.77
SYNE4-207ENST00000505054 TMA7Q9Y2S6 64 aaKnown RBP10.23□□□□□ -0.77
SYNE4-207ENST00000505054 MIEN1Q9BRT3 115 aa10.22□□□□□ -0.77
SYNE4-207ENST00000505054 HSBP1L1C9JCN9 74 aa10.21□□□□□ -0.77
SYNE4-207ENST00000505054 TMEM238C9JI98 176 aa10.21□□□□□ -0.77
SYNE4-207ENST00000505054 SCGB1D4Q6XE38 83 aa10.2□□□□□ -0.78
SYNE4-207ENST00000505054 LINC00308Q8TCZ7 52 aa10.2□□□□□ -0.78
SYNE4-207ENST00000505054 DIRC1Q969H9 104 aa10.2□□□□□ -0.78
SYNE4-207ENST00000505054 TMEM126AQ9H061 195 aa10.2□□□□□ -0.78
SYNE4-207ENST00000505054 H0Y9J4 135 aa10.19□□□□□ -0.78
SYNE4-207ENST00000505054 ZNF861PO60384 105 aa10.19□□□□□ -0.78
SYNE4-207ENST00000505054 NDUFC2O95298 119 aa10.19□□□□□ -0.78
SYNE4-207ENST00000505054 REG3GQ6UW15 175 aa10.19□□□□□ -0.78
SYNE4-207ENST00000505054 TRBV10-3A0A0K0K1G6 114 aa10.18□□□□□ -0.78
SYNE4-207ENST00000505054 TRBV10-2A0A0K0K1G8 114 aa10.18□□□□□ -0.78
SYNE4-207ENST00000505054 KRTAP13-1Q8IUC0 172 aa10.18□□□□□ -0.78
SYNE4-207ENST00000505054 SPANXB1Q9NS25 103 aaPredicted RBP10.18□□□□□ -0.78
SYNE4-207ENST00000505054 SPANXDQ9BXN6 97 aa10.17□□□□□ -0.78
SYNE4-207ENST00000505054 SPANXCQ9NY87 97 aa10.17□□□□□ -0.78
SYNE4-207ENST00000505054 RPL28P46779 137 aaKnown RBP10.16□□□□□ -0.78
SYNE4-207ENST00000505054 PRYO14603 147 aa10.15□□□□□ -0.78
SYNE4-207ENST00000505054 JOSD1Q15040 202 aaPredicted RBP10.15□□□□□ -0.78
SYNE4-207ENST00000505054 KCNQ1DNQ9H478 68 aa10.15□□□□□ -0.78
SYNE4-207ENST00000505054 DDTP30046 118 aa10.14□□□□□ -0.79
SYNE4-207ENST00000505054 UBE2AP49459 152 aa10.14□□□□□ -0.79
SYNE4-207ENST00000505054 PRLHP81277 87 aa10.14□□□□□ -0.79
SYNE4-207ENST00000505054 FAM19A1Q7Z5A9 133 aa10.13□□□□□ -0.79
SYNE4-207ENST00000505054 IGLV6-57P01721 117 aa10.12□□□□□ -0.79
SYNE4-207ENST00000505054 KRTAP1-4P0C5Y4 121 aa10.12□□□□□ -0.79
SYNE4-207ENST00000505054 SPRR1AP35321 89 aa10.12□□□□□ -0.79
SYNE4-207ENST00000505054 KRTAP10-8P60410 259 aa10.12□□□□□ -0.79
SYNE4-207ENST00000505054 KRTAP4-16G5E9R7 235 aaPredicted RBP10.11□□□□□ -0.79
SYNE4-207ENST00000505054 Q6ZVH6 145 aa10.11□□□□□ -0.79
SYNE4-207ENST00000505054 COX8AP10176 69 aa10.1□□□□□ -0.79
SYNE4-207ENST00000505054 IFITM1P13164 125 aa10.1□□□□□ -0.79
SYNE4-207ENST00000505054 PYY3Q5JQD4 70 aa10.1□□□□□ -0.79
SYNE4-207ENST00000505054 S100A7L2Q5SY68 101 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms