RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 OXTP01178 125 aa12.49□□□□□ -0.41
HERC6-205ENST00000504905 HERV-K104P63124 156 aa12.49□□□□□ -0.41
HERC6-205ENST00000504905 FAT3Q8TDW7 4589 aa12.48□□□□□ -0.41
HERC6-205ENST00000504905 MYMXA0A1B0GTQ4 84 aa12.48□□□□□ -0.41
HERC6-205ENST00000504905 LINC00158P58513 81 aa12.48□□□□□ -0.41
HERC6-205ENST00000504905 TSPEAR-AS2P59090 65 aa12.48□□□□□ -0.41
HERC6-205ENST00000504905 SND1-IT1Q9HBX3 110 aa12.48□□□□□ -0.41
HERC6-205ENST00000504905 PLA2G2DQ9UNK4 145 aa12.48□□□□□ -0.41
HERC6-205ENST00000504905 J3QQQ9 107 aa12.47□□□□□ -0.41
HERC6-205ENST00000504905 LBHQ53QV2 105 aaPredicted RBP12.47□□□□□ -0.41
HERC6-205ENST00000504905 MEIG1Q5JSS6 88 aa12.47□□□□□ -0.41
HERC6-205ENST00000504905 C1orf137Q5JT78 98 aa12.47□□□□□ -0.41
HERC6-205ENST00000504905 PKHD1L1Q86WI1 4243 aa12.47□□□□□ -0.41
HERC6-205ENST00000504905 TP73-AS1Q9UF72 201 aa12.46□□□□□ -0.41
HERC6-205ENST00000504905 A0A0U1RRA0 63 aa12.45□□□□□ -0.42
HERC6-205ENST00000504905 LGALS3P17931 250 aaKnown RBP12.45□□□□□ -0.42
HERC6-205ENST00000504905 MRPL55Q7Z7F7 128 aaKnown RBP12.45□□□□□ -0.42
HERC6-205ENST00000504905 KRTAP11-1Q8IUC1 163 aa12.45□□□□□ -0.42
HERC6-205ENST00000504905 LINC00587B1AMM8 73 aa12.44□□□□□ -0.42
HERC6-205ENST00000504905 SMIM13P0DJ93 91 aa12.44□□□□□ -0.42
HERC6-205ENST00000504905 NKAPP1Q8N9T2 125 aa12.44□□□□□ -0.42
HERC6-205ENST00000504905 C20orf202A1L168 122 aa12.43□□□□□ -0.42
HERC6-205ENST00000504905 E9PLD3 99 aa12.43□□□□□ -0.42
HERC6-205ENST00000504905 NMUP48645 174 aa12.43□□□□□ -0.42
HERC6-205ENST00000504905 IGLV5-37A0A075B6J1 123 aa12.42□□□□□ -0.42
HERC6-205ENST00000504905 RPL24P83731 157 aaKnown RBP12.41□□□□□ -0.42
HERC6-205ENST00000504905 SPINK6Q6UWN8 80 aa12.41□□□□□ -0.42
HERC6-205ENST00000504905 LINC00167Q96N53 147 aa12.4□□□□□ -0.42
HERC6-205ENST00000504905 GAGE10A6NGK3 116 aa12.39□□□□□ -0.43
HERC6-205ENST00000504905 AKR1D1P51857 326 aa12.39□□□□□ -0.43
HERC6-205ENST00000504905 SRSF9Q13242 221 aaKnown RBP eCLIP12.39□□□□□ -0.43
HERC6-205ENST00000504905 MIR7-3HGQ8N6C7 128 aa12.39□□□□□ -0.43
HERC6-205ENST00000504905 IGLV7-43P04211 117 aa12.38□□□□□ -0.43
HERC6-205ENST00000504905 VPREB1P12018 145 aa12.38□□□□□ -0.43
HERC6-205ENST00000504905 RPL37AP8A6NKH3 93 aa12.37□□□□□ -0.43
HERC6-205ENST00000504905 Q8NDZ9 215 aa12.34□□□□□ -0.43
HERC6-205ENST00000504905 SCGB1D1O95968 90 aa12.33□□□□□ -0.44
HERC6-205ENST00000504905 REG3GQ6UW15 175 aa12.33□□□□□ -0.44
HERC6-205ENST00000504905 BOD1L2Q8IYS8 172 aa12.33□□□□□ -0.44
HERC6-205ENST00000504905 ATOH7Q8N100 152 aa12.33□□□□□ -0.44
HERC6-205ENST00000504905 DAND5Q8N907 189 aa12.33□□□□□ -0.44
HERC6-205ENST00000504905 A0A0J9YXY3 114 aa12.32□□□□□ -0.44
HERC6-205ENST00000504905 IGKV2-28A0A075B6P5 120 aa12.31□□□□□ -0.44
HERC6-205ENST00000504905 IGKV2D-26A0A0A0MRZ7 120 aa12.31□□□□□ -0.44
HERC6-205ENST00000504905 IGKV2D-28P01615 120 aa12.31□□□□□ -0.44
HERC6-205ENST00000504905 DIRC1Q969H9 104 aa12.31□□□□□ -0.44
HERC6-205ENST00000504905 ZNF815PA8K554 130 aa12.3□□□□□ -0.44
HERC6-205ENST00000504905 IGLV1-50A0A075B6I6 118 aa12.29□□□□□ -0.44
HERC6-205ENST00000504905 BCE1O60756 84 aa12.29□□□□□ -0.44
HERC6-205ENST00000504905 MIEN1Q9BRT3 115 aa12.29□□□□□ -0.44
HERC6-205ENST00000504905 M0R378 163 aa12.28□□□□□ -0.44
HERC6-205ENST00000504905 LOC107984156A0A0G2JMH3 177 aa12.27□□□□□ -0.45
HERC6-205ENST00000504905 JOSD1Q15040 202 aaPredicted RBP12.27□□□□□ -0.45
HERC6-205ENST00000504905 ANKRD39Q53RE8 183 aa12.27□□□□□ -0.45
HERC6-205ENST00000504905 ARL17AQ8IVW1 177 aa12.27□□□□□ -0.45
HERC6-205ENST00000504905 TTTY13Q9BZ97 58 aa12.27□□□□□ -0.45
HERC6-205ENST00000504905 H0Y9J4 135 aa12.26□□□□□ -0.45
HERC6-205ENST00000504905 NCR3O14931 201 aa12.26□□□□□ -0.45
HERC6-205ENST00000504905 ZNF861PO60384 105 aa12.26□□□□□ -0.45
HERC6-205ENST00000504905 ADAMTSL4-AS1Q5T5F5 129 aa12.25□□□□□ -0.45
HERC6-205ENST00000504905 LINC01600Q96MT4 127 aa12.25□□□□□ -0.45
HERC6-205ENST00000504905 HSBP1L1C9JCN9 74 aa12.24□□□□□ -0.45
HERC6-205ENST00000504905 TIMM17BO60830 172 aa12.24□□□□□ -0.45
HERC6-205ENST00000504905 RPL28P46779 137 aaKnown RBP12.24□□□□□ -0.45
HERC6-205ENST00000504905 TMEM238C9JI98 176 aa12.23□□□□□ -0.45
HERC6-205ENST00000504905 NPC2P61916 151 aa12.23□□□□□ -0.45
HERC6-205ENST00000504905 MT1HL1P0DM35 61 aa12.22□□□□□ -0.45
HERC6-205ENST00000504905 UBE2AP49459 152 aa12.22□□□□□ -0.45
HERC6-205ENST00000504905 TMEM126AQ9H061 195 aa12.22□□□□□ -0.45
HERC6-205ENST00000504905 LITAFQ99732 161 aa12.21□□□□□ -0.45
HERC6-205ENST00000504905 RNF213Q63HN8 5207 aa12.21□□□□□ -0.46
HERC6-205ENST00000504905 SOSTDC1Q6X4U4 206 aa12.2□□□□□ -0.46
HERC6-205ENST00000504905 SCGB1D4Q6XE38 83 aa12.2□□□□□ -0.46
HERC6-205ENST00000504905 TRBV10-2A0A0K0K1G8 114 aa12.19□□□□□ -0.46
HERC6-205ENST00000504905 NDUFC2O95298 119 aa12.19□□□□□ -0.46
HERC6-205ENST00000504905 PYY3Q5JQD4 70 aa12.19□□□□□ -0.46
HERC6-205ENST00000504905 FAM19A1Q7Z5A9 133 aa12.19□□□□□ -0.46
HERC6-205ENST00000504905 SPANXB1Q9NS25 103 aaPredicted RBP12.19□□□□□ -0.46
HERC6-205ENST00000504905 PCP2Q8IVA1 136 aa12.18□□□□□ -0.46
HERC6-205ENST00000504905 TRBV10-3A0A0K0K1G6 114 aa12.17□□□□□ -0.46
HERC6-205ENST00000504905 PRYO14603 147 aa12.17□□□□□ -0.46
HERC6-205ENST00000504905 EIF4EBP3O60516 100 aaPredicted RBP12.17□□□□□ -0.46
HERC6-205ENST00000504905 KRTAP13-1Q8IUC0 172 aa12.17□□□□□ -0.46
HERC6-205ENST00000504905 LINC00308Q8TCZ7 52 aa12.17□□□□□ -0.46
HERC6-205ENST00000504905 S100A12P80511 92 aa12.16□□□□□ -0.46
HERC6-205ENST00000504905 DDTP30046 118 aa12.15□□□□□ -0.46
HERC6-205ENST00000504905 PRLHP81277 87 aa12.15□□□□□ -0.46
HERC6-205ENST00000504905 KCNQ1DNQ9H478 68 aa12.15□□□□□ -0.46
HERC6-205ENST00000504905 S100A7L2Q5SY68 101 aa12.14□□□□□ -0.47
HERC6-205ENST00000504905 LRP2P98164 4655 aa12.14□□□□□ -0.47
HERC6-205ENST00000504905 KRTAP1-4P0C5Y4 121 aa12.13□□□□□ -0.47
HERC6-205ENST00000504905 KRTAP10-8P60410 259 aa12.13□□□□□ -0.47
HERC6-205ENST00000504905 VAMP8Q9BV40 100 aa12.13□□□□□ -0.47
HERC6-205ENST00000504905 SPANXDQ9BXN6 97 aa12.13□□□□□ -0.47
HERC6-205ENST00000504905 SPANXCQ9NY87 97 aa12.13□□□□□ -0.47
HERC6-205ENST00000504905 PAM16Q9Y3D7 125 aa12.12□□□□□ -0.47
HERC6-205ENST00000504905 LOC105371267A0A1B0GV96 52 aa12.11□□□□□ -0.47
HERC6-205ENST00000504905 SPATA45Q537H7 98 aa12.11□□□□□ -0.47
HERC6-205ENST00000504905 COPS9Q8WXC6 57 aa12.11□□□□□ -0.47
HERC6-205ENST00000504905 TNXBP22105 4242 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms