RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 C9orf129Q5T035 196 aaKnown RBP7.49□□□□□ -1.21
PDLIM5-208ENST00000504489 KRTAP4-7Q9BYR0 210 aa7.49□□□□□ -1.21
PDLIM5-208ENST00000504489 LGALS3P17931 250 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-208ENST00000504489 PFN2P35080 140 aa7.48□□□□□ -1.21
PDLIM5-208ENST00000504489 HERC2O95714 4834 aa7.47□□□□□ -1.21
PDLIM5-208ENST00000504489 LINC00587B1AMM8 73 aa7.47□□□□□ -1.21
PDLIM5-208ENST00000504489 Q5VSD8 79 aa7.47□□□□□ -1.21
PDLIM5-208ENST00000504489 XAGE1AQ9HD64 81 aa7.47□□□□□ -1.21
PDLIM5-208ENST00000504489 FAM168BA1KXE4 195 aa7.46□□□□□ -1.22
PDLIM5-208ENST00000504489 LINC00158P58513 81 aa7.45□□□□□ -1.22
PDLIM5-208ENST00000504489 LCE4AQ5TA78 99 aa7.45□□□□□ -1.22
PDLIM5-208ENST00000504489 KRTAP7-1Q8IUC3 87 aa7.45□□□□□ -1.22
PDLIM5-208ENST00000504489 ATOH7Q8N100 152 aa7.45□□□□□ -1.22
PDLIM5-208ENST00000504489 C7orf33Q8WU49 177 aa7.45□□□□□ -1.22
PDLIM5-208ENST00000504489 SND1-IT1Q9HBX3 110 aa7.45□□□□□ -1.22
PDLIM5-208ENST00000504489 PLA2G2DQ9UNK4 145 aa7.45□□□□□ -1.22
PDLIM5-208ENST00000504489 FAT1Q14517 4588 aa7.45□□□□□ -1.22
PDLIM5-208ENST00000504489 IGKV2D-26A0A0A0MRZ7 120 aa7.44□□□□□ -1.22
PDLIM5-208ENST00000504489 PLA2G1BP04054 148 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-208ENST00000504489 SMIM13P0DJ93 91 aa7.44□□□□□ -1.22
PDLIM5-208ENST00000504489 MEIG1Q5JSS6 88 aa7.44□□□□□ -1.22
PDLIM5-208ENST00000504489 FAM19A5Q7Z5A7 132 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-208ENST00000504489 KRTAP4-5Q9BYR2 181 aa7.44□□□□□ -1.22
PDLIM5-208ENST00000504489 ANKRD39Q53RE8 183 aa7.43□□□□□ -1.22
PDLIM5-208ENST00000504489 SERTAD4-AS1Q5TG53 156 aa7.43□□□□□ -1.22
PDLIM5-208ENST00000504489 TMA7Q9Y2S6 64 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-208ENST00000504489 VPS13BQ7Z7G8 4022 aa7.43□□□□□ -1.22
PDLIM5-208ENST00000504489 A0A0J9YXY3 114 aa7.42□□□□□ -1.22
PDLIM5-208ENST00000504489 A0A0U1RRA0 63 aa7.42□□□□□ -1.22
PDLIM5-208ENST00000504489 M0QXV9 152 aa7.42□□□□□ -1.22
PDLIM5-208ENST00000504489 SCGB1D1O95968 90 aa7.42□□□□□ -1.22
PDLIM5-208ENST00000504489 KRTAP10-4P60372 401 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-208ENST00000504489 RPL37AP61513 92 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-208ENST00000504489 PHF5AQ7RTV0 110 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-208ENST00000504489 TP73-AS1Q9UF72 201 aa7.42□□□□□ -1.22
PDLIM5-208ENST00000504489 SRRM2Q9UQ35 2752 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-208ENST00000504489 IGLV5-37A0A075B6J1 123 aa7.41□□□□□ -1.22
PDLIM5-208ENST00000504489 MIR7-3HGQ8N6C7 128 aa7.41□□□□□ -1.22
PDLIM5-208ENST00000504489 C22orf24Q9Y442 160 aa7.41□□□□□ -1.22
PDLIM5-208ENST00000504489 ZNF815PA8K554 130 aa7.4□□□□□ -1.22
PDLIM5-208ENST00000504489 LOC107984156A0A0G2JMH3 177 aa7.39□□□□□ -1.23
PDLIM5-208ENST00000504489 HSBP1L1C9JCN9 74 aa7.39□□□□□ -1.23
PDLIM5-208ENST00000504489 TIMM17BO60830 172 aa7.39□□□□□ -1.23
PDLIM5-208ENST00000504489 VPREB1P12018 145 aa7.39□□□□□ -1.23
PDLIM5-208ENST00000504489 RPL24P83731 157 aaKnown RBP7.39□□□□□ -1.23
PDLIM5-208ENST00000504489 LBHQ53QV2 105 aaPredicted RBP7.39□□□□□ -1.23
PDLIM5-208ENST00000504489 MRPL55Q7Z7F7 128 aaKnown RBP7.39□□□□□ -1.23
PDLIM5-208ENST00000504489 ARL17AQ8IVW1 177 aa7.39□□□□□ -1.23
PDLIM5-208ENST00000504489 TTTY13Q9BZ97 58 aa7.39□□□□□ -1.23
PDLIM5-208ENST00000504489 JOSD1Q15040 202 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-208ENST00000504489 NKAPP1Q8N9T2 125 aa7.38□□□□□ -1.23
PDLIM5-208ENST00000504489 PRR3P79522 188 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-208ENST00000504489 ADAMTSL4-AS1Q5T5F5 129 aa7.37□□□□□ -1.23
PDLIM5-208ENST00000504489 PCP2Q8IVA1 136 aa7.37□□□□□ -1.23
PDLIM5-208ENST00000504489 DAND5Q8N907 189 aa7.37□□□□□ -1.23
PDLIM5-208ENST00000504489 Q8NDZ9 215 aa7.37□□□□□ -1.23
PDLIM5-208ENST00000504489 LITAFQ99732 161 aa7.37□□□□□ -1.23
PDLIM5-208ENST00000504489 PSORS1C2Q9UIG4 136 aa7.37□□□□□ -1.23
PDLIM5-208ENST00000504489 UBE2BP63146 152 aa7.36□□□□□ -1.23
PDLIM5-208ENST00000504489 KRTAP11-1Q8IUC1 163 aa7.36□□□□□ -1.23
PDLIM5-208ENST00000504489 BOD1L2Q8IYS8 172 aa7.36□□□□□ -1.23
PDLIM5-208ENST00000504489 LINC00167Q96N53 147 aa7.36□□□□□ -1.23
PDLIM5-208ENST00000504489 INAFM2P0DMQ5 153 aa7.35□□□□□ -1.23
PDLIM5-208ENST00000504489 SCGB1D4Q6XE38 83 aa7.35□□□□□ -1.23
PDLIM5-208ENST00000504489 KRTAP4-9Q9BYQ8 210 aa7.35□□□□□ -1.23
PDLIM5-208ENST00000504489 FLG2Q5D862 2391 aaPredicted RBP7.35□□□□□ -1.23
PDLIM5-208ENST00000504489 MIEN1Q9BRT3 115 aa7.34□□□□□ -1.23
PDLIM5-208ENST00000504489 PKHD1L1Q86WI1 4243 aa7.33□□□□□ -1.24
PDLIM5-208ENST00000504489 GAGE10A6NGK3 116 aa7.33□□□□□ -1.24
PDLIM5-208ENST00000504489 KRTAP9-7A8MTY7 169 aa7.33□□□□□ -1.24
PDLIM5-208ENST00000504489 M0R378 163 aa7.33□□□□□ -1.24
PDLIM5-208ENST00000504489 SOSTDC1Q6X4U4 206 aa7.33□□□□□ -1.24
PDLIM5-208ENST00000504489 RPL37AP8A6NKH3 93 aa7.32□□□□□ -1.24
PDLIM5-208ENST00000504489 TMEM238C9JI98 176 aa7.32□□□□□ -1.24
PDLIM5-208ENST00000504489 NDUFC2O95298 119 aa7.32□□□□□ -1.24
PDLIM5-208ENST00000504489 HNRNPA3P51991 378 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-208ENST00000504489 PYY3Q5JQD4 70 aa7.32□□□□□ -1.24
PDLIM5-208ENST00000504489 C1orf137Q5JT78 98 aa7.32□□□□□ -1.24
PDLIM5-208ENST00000504489 LINC00308Q8TCZ7 52 aa7.32□□□□□ -1.24
PDLIM5-208ENST00000504489 SPANXDQ9BXN6 97 aa7.32□□□□□ -1.24
PDLIM5-208ENST00000504489 SPANXCQ9NY87 97 aa7.32□□□□□ -1.24
PDLIM5-208ENST00000504489 IGLV1-50A0A075B6I6 118 aa7.31□□□□□ -1.24
PDLIM5-208ENST00000504489 COX8AP10176 69 aa7.31□□□□□ -1.24
PDLIM5-208ENST00000504489 NPC2P61916 151 aa7.31□□□□□ -1.24
PDLIM5-208ENST00000504489 SRSF9Q13242 221 aaKnown RBP eCLIP7.31□□□□□ -1.24
PDLIM5-208ENST00000504489 Q6ZVH6 145 aa7.31□□□□□ -1.24
PDLIM5-208ENST00000504489 VAMP8Q9BV40 100 aa7.31□□□□□ -1.24
PDLIM5-208ENST00000504489 PPDPFQ9H3Y8 114 aa7.31□□□□□ -1.24
PDLIM5-208ENST00000504489 PAM16Q9Y3D7 125 aa7.31□□□□□ -1.24
PDLIM5-208ENST00000504489 TRBV10-2A0A0K0K1G8 114 aa7.3□□□□□ -1.24
PDLIM5-208ENST00000504489 DLEU1O43261 78 aa7.3□□□□□ -1.24
PDLIM5-208ENST00000504489 IGLV7-43P04211 117 aa7.3□□□□□ -1.24
PDLIM5-208ENST00000504489 SPATA45Q537H7 98 aa7.3□□□□□ -1.24
PDLIM5-208ENST00000504489 IGKV2-28A0A075B6P5 120 aa7.29□□□□□ -1.24
PDLIM5-208ENST00000504489 NCR3O14931 201 aa7.29□□□□□ -1.24
PDLIM5-208ENST00000504489 IGKV2D-28P01615 120 aa7.29□□□□□ -1.24
PDLIM5-208ENST00000504489 IFITM1P13164 125 aa7.29□□□□□ -1.24
PDLIM5-208ENST00000504489 SPINK6Q6UWN8 80 aa7.29□□□□□ -1.24
PDLIM5-208ENST00000504489 COPS9Q8WXC6 57 aa7.29□□□□□ -1.24
PDLIM5-208ENST00000504489 SPANXB1Q9NS25 103 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms