RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 FAM168BA1KXE4 195 aa9.58□□□□□ -0.88
DDR1-250ENST00000503628 LEPROTO15243 131 aa9.58□□□□□ -0.88
DDR1-250ENST00000503628 ERG28Q9UKR5 140 aa9.58□□□□□ -0.88
DDR1-250ENST00000503628 S100A2P29034 98 aa9.57□□□□□ -0.88
DDR1-250ENST00000503628 PFN2P35080 140 aa9.57□□□□□ -0.88
DDR1-250ENST00000503628 COX17Q14061 63 aa9.57□□□□□ -0.88
DDR1-250ENST00000503628 FAM19A5Q7Z5A7 132 aaPredicted RBP9.57□□□□□ -0.88
DDR1-250ENST00000503628 PLEKHB2Q96CS7 222 aa9.57□□□□□ -0.88
DDR1-250ENST00000503628 XAGE1AQ9HD64 81 aa9.57□□□□□ -0.88
DDR1-250ENST00000503628 TSPEAR-AS2P59090 65 aa9.56□□□□□ -0.88
DDR1-250ENST00000503628 PRR4Q16378 134 aa9.56□□□□□ -0.88
DDR1-250ENST00000503628 LCE2AQ5TA79 106 aaPredicted RBP9.56□□□□□ -0.88
DDR1-250ENST00000503628 NDUFA12Q9UI09 145 aa9.56□□□□□ -0.88
DDR1-250ENST00000503628 FAT4Q6V0I7 4981 aa9.55□□□□□ -0.88
DDR1-250ENST00000503628 C20orf202A1L168 122 aa9.55□□□□□ -0.88
DDR1-250ENST00000503628 C1orf137Q5JT78 98 aa9.55□□□□□ -0.88
DDR1-250ENST00000503628 KRTAP7-1Q8IUC3 87 aa9.55□□□□□ -0.88
DDR1-250ENST00000503628 HIST1H2BLQ99880 126 aa9.55□□□□□ -0.88
DDR1-250ENST00000503628 MYMXA0A1B0GTQ4 84 aa9.54□□□□□ -0.88
DDR1-250ENST00000503628 J3QQQ9 107 aa9.54□□□□□ -0.88
DDR1-250ENST00000503628 HERV-K104P63124 156 aa9.54□□□□□ -0.88
DDR1-250ENST00000503628 PHF5AQ7RTV0 110 aaKnown RBP9.54□□□□□ -0.88
DDR1-250ENST00000503628 E9PLD3 99 aa9.53□□□□□ -0.88
DDR1-250ENST00000503628 SNRPEP62304 92 aaKnown RBP9.53□□□□□ -0.88
DDR1-250ENST00000503628 M0QXV9 152 aa9.52□□□□□ -0.89
DDR1-250ENST00000503628 LGALS3P17931 250 aaKnown RBP9.52□□□□□ -0.89
DDR1-250ENST00000503628 NMUP48645 174 aa9.52□□□□□ -0.89
DDR1-250ENST00000503628 DIRC1Q969H9 104 aa9.52□□□□□ -0.89
DDR1-250ENST00000503628 C5orf52A6NGY3 159 aa9.51□□□□□ -0.89
DDR1-250ENST00000503628 LINC00158P58513 81 aa9.51□□□□□ -0.89
DDR1-250ENST00000503628 MEIG1Q5JSS6 88 aa9.51□□□□□ -0.89
DDR1-250ENST00000503628 SND1-IT1Q9HBX3 110 aa9.51□□□□□ -0.89
DDR1-250ENST00000503628 LINC00587B1AMM8 73 aa9.5□□□□□ -0.89
DDR1-250ENST00000503628 IGLV7-43P04211 117 aa9.5□□□□□ -0.89
DDR1-250ENST00000503628 AKR1D1P51857 326 aa9.5□□□□□ -0.89
DDR1-250ENST00000503628 A0A0U1RRA0 63 aa9.49□□□□□ -0.89
DDR1-250ENST00000503628 SMIM13P0DJ93 91 aa9.49□□□□□ -0.89
DDR1-250ENST00000503628 C22orf24Q9Y442 160 aa9.49□□□□□ -0.89
DDR1-250ENST00000503628 IGLV1-50A0A075B6I6 118 aa9.48□□□□□ -0.89
DDR1-250ENST00000503628 H0Y9J4 135 aa9.48□□□□□ -0.89
DDR1-250ENST00000503628 TP73-AS1Q9UF72 201 aa9.48□□□□□ -0.89
DDR1-250ENST00000503628 IGLV5-37A0A075B6J1 123 aa9.47□□□□□ -0.89
DDR1-250ENST00000503628 ATOH7Q8N100 152 aa9.47□□□□□ -0.89
DDR1-250ENST00000503628 UBE2BP63146 152 aa9.46□□□□□ -0.9
DDR1-250ENST00000503628 LBHQ53QV2 105 aaPredicted RBP9.46□□□□□ -0.9
DDR1-250ENST00000503628 MIR7-3HGQ8N6C7 128 aa9.46□□□□□ -0.9
DDR1-250ENST00000503628 IGKV2D-26A0A0A0MRZ7 120 aa9.45□□□□□ -0.9
DDR1-250ENST00000503628 KRTAP1-4P0C5Y4 121 aa9.45□□□□□ -0.9
DDR1-250ENST00000503628 MRPL55Q7Z7F7 128 aaKnown RBP9.45□□□□□ -0.9
DDR1-250ENST00000503628 KRTAP11-1Q8IUC1 163 aa9.45□□□□□ -0.9
DDR1-250ENST00000503628 NKAPP1Q8N9T2 125 aa9.45□□□□□ -0.9
DDR1-250ENST00000503628 VPREB1P12018 145 aa9.44□□□□□ -0.9
DDR1-250ENST00000503628 RPL24P83731 157 aaKnown RBP9.44□□□□□ -0.9
DDR1-250ENST00000503628 A0A0J9YXY3 114 aa9.43□□□□□ -0.9
DDR1-250ENST00000503628 ANKRD39Q53RE8 183 aa9.43□□□□□ -0.9
DDR1-250ENST00000503628 ZNF815PA8K554 130 aa9.42□□□□□ -0.9
DDR1-250ENST00000503628 Q8NDZ9 215 aa9.42□□□□□ -0.9
DDR1-250ENST00000503628 LINC00167Q96N53 147 aa9.42□□□□□ -0.9
DDR1-250ENST00000503628 DAND5Q8N907 189 aa9.41□□□□□ -0.9
DDR1-250ENST00000503628 TTTY13Q9BZ97 58 aa9.41□□□□□ -0.9
DDR1-250ENST00000503628 GAGE10A6NGK3 116 aa9.4□□□□□ -0.9
DDR1-250ENST00000503628 BOD1L2Q8IYS8 172 aa9.4□□□□□ -0.9
DDR1-250ENST00000503628 LOC107984156A0A0G2JMH3 177 aa9.39□□□□□ -0.91
DDR1-250ENST00000503628 RPL37AP8A6NKH3 93 aa9.39□□□□□ -0.91
DDR1-250ENST00000503628 SCGB1D1O95968 90 aa9.39□□□□□ -0.91
DDR1-250ENST00000503628 RPL13AP40429 203 aaKnown RBP9.39□□□□□ -0.91
DDR1-250ENST00000503628 ARL17AQ8IVW1 177 aa9.39□□□□□ -0.91
DDR1-250ENST00000503628 TIMM17BO60830 172 aa9.38□□□□□ -0.91
DDR1-250ENST00000503628 TSPAN13O95857 204 aa9.38□□□□□ -0.91
DDR1-250ENST00000503628 ADAMTSL4-AS1Q5T5F5 129 aa9.38□□□□□ -0.91
DDR1-250ENST00000503628 TMA7Q9Y2S6 64 aaKnown RBP9.38□□□□□ -0.91
DDR1-250ENST00000503628 HSBP1L1C9JCN9 74 aa9.37□□□□□ -0.91
DDR1-250ENST00000503628 LITAFQ99732 161 aa9.37□□□□□ -0.91
DDR1-250ENST00000503628 M0R378 163 aa9.36□□□□□ -0.91
DDR1-250ENST00000503628 MIEN1Q9BRT3 115 aa9.36□□□□□ -0.91
DDR1-250ENST00000503628 IGKV2-28A0A075B6P5 120 aa9.35□□□□□ -0.91
DDR1-250ENST00000503628 IGKV2D-28P01615 120 aa9.35□□□□□ -0.91
DDR1-250ENST00000503628 PCP2Q8IVA1 136 aa9.35□□□□□ -0.91
DDR1-250ENST00000503628 NCR3O14931 201 aa9.34□□□□□ -0.91
DDR1-250ENST00000503628 NPC2P61916 151 aa9.34□□□□□ -0.91
DDR1-250ENST00000503628 SOSTDC1Q6X4U4 206 aa9.34□□□□□ -0.91
DDR1-250ENST00000503628 SCGB1D4Q6XE38 83 aa9.34□□□□□ -0.91
DDR1-250ENST00000503628 BCE1O60756 84 aa9.33□□□□□ -0.92
DDR1-250ENST00000503628 EIF4EBP3O60516 100 aaPredicted RBP9.32□□□□□ -0.92
DDR1-250ENST00000503628 NDUFC2O95298 119 aa9.32□□□□□ -0.92
DDR1-250ENST00000503628 TMEM238C9JI98 176 aa9.31□□□□□ -0.92
DDR1-250ENST00000503628 LINC00308Q8TCZ7 52 aa9.31□□□□□ -0.92
DDR1-250ENST00000503628 SPANXDQ9BXN6 97 aa9.31□□□□□ -0.92
DDR1-250ENST00000503628 SPANXB1Q9NS25 103 aaPredicted RBP9.31□□□□□ -0.92
DDR1-250ENST00000503628 SPANXCQ9NY87 97 aa9.31□□□□□ -0.92
DDR1-250ENST00000503628 TRBV10-2A0A0K0K1G8 114 aa9.3□□□□□ -0.92
DDR1-250ENST00000503628 JOSD1Q15040 202 aaPredicted RBP9.3□□□□□ -0.92
DDR1-250ENST00000503628 ZNF861PO60384 105 aa9.29□□□□□ -0.92
DDR1-250ENST00000503628 TMEM126AQ9H061 195 aa9.29□□□□□ -0.92
DDR1-250ENST00000503628 RPL28P46779 137 aaKnown RBP9.28□□□□□ -0.92
DDR1-250ENST00000503628 TRBV10-3A0A0K0K1G6 114 aa9.27□□□□□ -0.93
DDR1-250ENST00000503628 PRYO14603 147 aa9.27□□□□□ -0.93
DDR1-250ENST00000503628 Q6ZVH6 145 aa9.27□□□□□ -0.93
DDR1-250ENST00000503628 IFITM1P13164 125 aa9.26□□□□□ -0.93
DDR1-250ENST00000503628 DDTP30046 118 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms