RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 C7orf77A4D0Y5 90 aa2.65□□□□□ -1.99
NIPBL-203ENST00000503274 ZNF727A8MUV8 499 aa2.65□□□□□ -1.99
NIPBL-203ENST00000503274 HIGD1CA8MV81 97 aa2.65□□□□□ -1.99
NIPBL-203ENST00000503274 COX7A2LO14548 114 aa2.65□□□□□ -1.99
NIPBL-203ENST00000503274 APOMO95445 188 aa2.65□□□□□ -1.99
NIPBL-203ENST00000503274 P0C880 135 aa2.65□□□□□ -1.99
NIPBL-203ENST00000503274 ALKAL2Q6UX46 152 aa2.65□□□□□ -1.99
NIPBL-203ENST00000503274 MRPL52Q86TS9 123 aaKnown RBP2.65□□□□□ -1.99
NIPBL-203ENST00000503274 ZNF664Q8N3J9 261 aa2.65□□□□□ -1.99
NIPBL-203ENST00000503274 CARD19Q96LW7 228 aa2.65□□□□□ -1.99
NIPBL-203ENST00000503274 OSTCQ9NRP0 149 aa2.65□□□□□ -1.99
NIPBL-203ENST00000503274 CDC42SE2Q9NRR3 84 aa2.65□□□□□ -1.99
NIPBL-203ENST00000503274 TNXBP22105 4242 aa2.64□□□□□ -1.99
NIPBL-203ENST00000503274 LOC107984640A0A0U1RRK4 108 aa2.64□□□□□ -1.99
NIPBL-203ENST00000503274 S100A8P05109 93 aa2.64□□□□□ -1.99
NIPBL-203ENST00000503274 ESDP10768 282 aa2.64□□□□□ -1.99
NIPBL-203ENST00000503274 POLR2KP53803 58 aaKnown RBP2.64□□□□□ -1.99
NIPBL-203ENST00000503274 TMEM241Q24JQ0 296 aa2.64□□□□□ -1.99
NIPBL-203ENST00000503274 SPINK6Q6UWN8 80 aa2.64□□□□□ -1.99
NIPBL-203ENST00000503274 TMEM136Q6ZRR5 245 aa2.64□□□□□ -1.99
NIPBL-203ENST00000503274 TMEM242Q9NWH2 141 aa2.64□□□□□ -1.99
NIPBL-203ENST00000503274 CARHSP1Q9Y2V2 147 aaKnown RBP2.64□□□□□ -1.99
NIPBL-203ENST00000503274 A0A096LNI7 61 aa2.63□□□□□ -1.99
NIPBL-203ENST00000503274 TRAV13-1A0A0B4J241 112 aa2.63□□□□□ -1.99
NIPBL-203ENST00000503274 LINC00862A6NCI5 91 aa2.63□□□□□ -1.99
NIPBL-203ENST00000503274 F8W036 122 aa2.63□□□□□ -1.99
NIPBL-203ENST00000503274 CKS2P33552 79 aa2.63□□□□□ -1.99
NIPBL-203ENST00000503274 AMN1Q8IY45 258 aa2.63□□□□□ -1.99
NIPBL-203ENST00000503274 LINC01600Q96MT4 127 aa2.63□□□□□ -1.99
NIPBL-203ENST00000503274 IMMP2LQ96T52 175 aa2.63□□□□□ -1.99
NIPBL-203ENST00000503274 C20orf78Q9BR46 151 aa2.63□□□□□ -1.99
NIPBL-203ENST00000503274 TIMM21Q9BVV7 248 aa2.63□□□□□ -1.99
NIPBL-203ENST00000503274 NAT8BQ9UHF3 227 aa2.63□□□□□ -1.99
NIPBL-203ENST00000503274 LRP2P98164 4655 aa2.63□□□□□ -1.99
NIPBL-203ENST00000503274 PPBPP02775 128 aa2.62□□□□□ -1.99
NIPBL-203ENST00000503274 MT-ND6P03923 174 aa2.62□□□□□ -1.99
NIPBL-203ENST00000503274 MT1HL1P0DM35 61 aa2.62□□□□□ -1.99
NIPBL-203ENST00000503274 RAB5AP20339 215 aa2.62□□□□□ -1.99
NIPBL-203ENST00000503274 PEA15Q15121 130 aa2.62□□□□□ -1.99
NIPBL-203ENST00000503274 ADIRFQ15847 76 aa2.62□□□□□ -1.99
NIPBL-203ENST00000503274 FAM104BQ5XKR9 115 aa2.62□□□□□ -1.99
NIPBL-203ENST00000503274 NUP35Q8NFH5 326 aa2.62□□□□□ -1.99
NIPBL-203ENST00000503274 OR10D4PQ8NGN7 298 aa2.62□□□□□ -1.99
NIPBL-203ENST00000503274 SMDT1Q9H4I9 107 aa2.62□□□□□ -1.99
NIPBL-203ENST00000503274 GEMIN7Q9H840 131 aaKnown RBP2.62□□□□□ -1.99
NIPBL-203ENST00000503274 NAT8Q9UHE5 227 aa2.62□□□□□ -1.99
NIPBL-203ENST00000503274 TRBV24-1A0A075B6N3 115 aa2.61□□□□□ -1.99
NIPBL-203ENST00000503274 TGIF2-C20orf24A0A0A6YYL0 155 aa2.61□□□□□ -1.99
NIPBL-203ENST00000503274 SRP19P09132 144 aaKnown RBP2.61□□□□□ -1.99
NIPBL-203ENST00000503274 RPL18AQ02543 176 aaKnown RBP2.61□□□□□ -1.99
NIPBL-203ENST00000503274 SPAG11BQ08648 103 aa2.61□□□□□ -1.99
NIPBL-203ENST00000503274 C5orf38Q86SI9 138 aa2.61□□□□□ -1.99
NIPBL-203ENST00000503274 LINC00526Q96FQ7 95 aa2.61□□□□□ -1.99
NIPBL-203ENST00000503274 SPANXA1Q9NS26 97 aa2.61□□□□□ -1.99
NIPBL-203ENST00000503274 UBE2D4Q9Y2X8 147 aa2.61□□□□□ -1.99
NIPBL-203ENST00000503274 V9GYV3 84 aa2.61□□□□□ -1.99
NIPBL-203ENST00000503274 A0A1W2PNN7 141 aa2.6□□□□□ -1.99
NIPBL-203ENST00000503274 SMIM27A0A1W2PRY6 76 aa2.6□□□□□ -1.99
NIPBL-203ENST00000503274 NDUFA1O15239 70 aa2.6□□□□□ -1.99
NIPBL-203ENST00000503274 G0S2P27469 103 aa2.6□□□□□ -1.99
NIPBL-203ENST00000503274 IFI27P40305 119 aaPredicted RBP2.6□□□□□ -1.99
NIPBL-203ENST00000503274 HBBP68871 147 aa2.6□□□□□ -1.99
NIPBL-203ENST00000503274 MRPS36P82909 103 aaKnown RBP2.6□□□□□ -1.99
NIPBL-203ENST00000503274 MRPL51Q4U2R6 128 aaKnown RBP2.6□□□□□ -1.99
NIPBL-203ENST00000503274 LUZP6Q538Z0 58 aa2.6□□□□□ -1.99
NIPBL-203ENST00000503274 C9orf116Q5BN46 136 aaPredicted RBP2.6□□□□□ -1.99
NIPBL-203ENST00000503274 ATP5L2Q7Z4Y8 100 aa2.6□□□□□ -1.99
NIPBL-203ENST00000503274 ORMDL3Q8N138 153 aa2.6□□□□□ -1.99
NIPBL-203ENST00000503274 ORAOV1Q8WV07 137 aa2.6□□□□□ -1.99
NIPBL-203ENST00000503274 DIRC1Q969H9 104 aa2.6□□□□□ -1.99
NIPBL-203ENST00000503274 SMIM2Q9BVW6 85 aa2.6□□□□□ -1.99
NIPBL-203ENST00000503274 MRPL35Q9NZE8 188 aaKnown RBP2.6□□□□□ -1.99
NIPBL-203ENST00000503274 D6R8Y8 96 aa2.59□□□□□ -1.99
NIPBL-203ENST00000503274 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.59□□□□□ -1.99
NIPBL-203ENST00000503274 SCO1O75880 301 aa2.59□□□□□ -1.99
NIPBL-203ENST00000503274 RPL39P62891 51 aaKnown RBP2.59□□□□□ -1.99
NIPBL-203ENST00000503274 C1orf137Q5JT78 98 aa2.59□□□□□ -1.99
NIPBL-203ENST00000503274 MRPL54Q6P161 138 aaKnown RBP2.59□□□□□ -1.99
NIPBL-203ENST00000503274 Q6ZUT4 128 aa2.59□□□□□ -1.99
NIPBL-203ENST00000503274 PACRGQ96M98 296 aaPredicted RBP2.59□□□□□ -1.99
NIPBL-203ENST00000503274 C2orf88Q9BSF0 95 aa2.59□□□□□ -1.99
NIPBL-203ENST00000503274 PSORS1C2Q9UIG4 136 aa2.59□□□□□ -1.99
NIPBL-203ENST00000503274 LAMTOR2Q9Y2Q5 125 aa2.59□□□□□ -1.99
NIPBL-203ENST00000503274 RNF213Q63HN8 5207 aa2.59□□□□□ -1.99
NIPBL-203ENST00000503274 TRBV30A0A0K0K1B3 111 aa2.58□□□□□ -2
NIPBL-203ENST00000503274 K7EMI3 77 aa2.58□□□□□ -2
NIPBL-203ENST00000503274 MT-ND4LP03901 98 aa2.58□□□□□ -2
NIPBL-203ENST00000503274 IGLV7-43P04211 117 aa2.58□□□□□ -2
NIPBL-203ENST00000503274 CKS1BP61024 79 aa2.58□□□□□ -2
NIPBL-203ENST00000503274 RAB14P61106 215 aa2.58□□□□□ -2
NIPBL-203ENST00000503274 UBE2BP63146 152 aa2.58□□□□□ -2
NIPBL-203ENST00000503274 SEC11AP67812 179 aa2.58□□□□□ -2
NIPBL-203ENST00000503274 TMEM141Q96I45 108 aa2.58□□□□□ -2
NIPBL-203ENST00000503274 PRELID3AQ96N28 172 aa2.58□□□□□ -2
NIPBL-203ENST00000503274 MAP1LC3AQ9H492 121 aa2.58□□□□□ -2
NIPBL-203ENST00000503274 LOC389332A0A1B0GUA5 103 aa2.57□□□□□ -2
NIPBL-203ENST00000503274 A0A1B0GXF2 115 aa2.57□□□□□ -2
NIPBL-203ENST00000503274 NPYP01303 97 aa2.57□□□□□ -2
NIPBL-203ENST00000503274 IGLV6-57P01721 117 aa2.57□□□□□ -2
NIPBL-203ENST00000503274 UBE2D1P51668 147 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms