RNA–Protein interactions for RNA: ENST00000502066.6

CRNDE-202, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-202ENST00000502066 CST9LQ9H4G1 147 aa2.64□□□□□ -1.99
CRNDE-202ENST00000502066 MRPL35Q9NZE8 188 aaKnown RBP2.64□□□□□ -1.99
CRNDE-202ENST00000502066 IL36BQ9NZH7 164 aa2.64□□□□□ -1.99
CRNDE-202ENST00000502066 RBM12B-AS1Q9P1G2 102 aa2.64□□□□□ -1.99
CRNDE-202ENST00000502066 MTFP1Q9UDX5 166 aa2.64□□□□□ -1.99
CRNDE-202ENST00000502066 C14orf166Q9Y224 244 aaKnown RBP2.64□□□□□ -1.99
CRNDE-202ENST00000502066 V9GY05 133 aa2.64□□□□□ -1.99
CRNDE-202ENST00000502066 SYNE1Q8NF91 8797 aaKnown RBP2.64□□□□□ -1.99
CRNDE-202ENST00000502066 A0A1B0GW15 77 aa2.63□□□□□ -1.99
CRNDE-202ENST00000502066 IFITM5A6NNB3 132 aa2.63□□□□□ -1.99
CRNDE-202ENST00000502066 ZNF727A8MUV8 499 aa2.63□□□□□ -1.99
CRNDE-202ENST00000502066 C9JQL5 133 aa2.63□□□□□ -1.99
CRNDE-202ENST00000502066 UBE2L6O14933 153 aa2.63□□□□□ -1.99
CRNDE-202ENST00000502066 OR7C2O60412 319 aa2.63□□□□□ -1.99
CRNDE-202ENST00000502066 AKR1C4P17516 323 aa2.63□□□□□ -1.99
CRNDE-202ENST00000502066 RPL7L1Q6DKI1 246 aaKnown RBP2.63□□□□□ -1.99
CRNDE-202ENST00000502066 Q6ZN92 141 aa2.63□□□□□ -1.99
CRNDE-202ENST00000502066 FAM231DQ6ZW35 169 aa2.63□□□□□ -1.99
CRNDE-202ENST00000502066 MRPL55Q7Z7F7 128 aaKnown RBP2.63□□□□□ -1.99
CRNDE-202ENST00000502066 OR1L4Q8NGR5 311 aa2.63□□□□□ -1.99
CRNDE-202ENST00000502066 YPEL4Q96NS1 127 aa2.63□□□□□ -1.99
CRNDE-202ENST00000502066 SCGB3A2Q96PL1 93 aa2.63□□□□□ -1.99
CRNDE-202ENST00000502066 RBKSQ9H477 322 aa2.63□□□□□ -1.99
CRNDE-202ENST00000502066 CYTL1Q9NRR1 136 aa2.63□□□□□ -1.99
CRNDE-202ENST00000502066 UQCR10Q9UDW1 63 aa2.63□□□□□ -1.99
CRNDE-202ENST00000502066 TRBV19A0A075B6N1 114 aa2.62□□□□□ -1.99
CRNDE-202ENST00000502066 TRBV24-1A0A075B6N3 115 aa2.62□□□□□ -1.99
CRNDE-202ENST00000502066 MAP1LC3B2A6NCE7 125 aa2.62□□□□□ -1.99
CRNDE-202ENST00000502066 COX7A2P2O60397 106 aa2.62□□□□□ -1.99
CRNDE-202ENST00000502066 IFNA1P01562 189 aa2.62□□□□□ -1.99
CRNDE-202ENST00000502066 CD3DP04234 171 aa2.62□□□□□ -1.99
CRNDE-202ENST00000502066 RPL12P30050 165 aaKnown RBP2.62□□□□□ -1.99
CRNDE-202ENST00000502066 ZNF80P51504 273 aaPredicted RBP2.62□□□□□ -1.99
CRNDE-202ENST00000502066 COA6Q5JTJ3 125 aaKnown RBP2.62□□□□□ -1.99
CRNDE-202ENST00000502066 AMMECR1LQ6DCA0 310 aa2.62□□□□□ -1.99
CRNDE-202ENST00000502066 TEX43Q6ZNM6 134 aa2.62□□□□□ -1.99
CRNDE-202ENST00000502066 CMTM2Q8TAZ6 248 aa2.62□□□□□ -1.99
CRNDE-202ENST00000502066 FAM213BQ8TBF2 198 aa2.62□□□□□ -1.99
CRNDE-202ENST00000502066 OBSCN-AS1Q96MR7 158 aa2.62□□□□□ -1.99
CRNDE-202ENST00000502066 AP1S3Q96PC3 154 aa2.62□□□□□ -1.99
CRNDE-202ENST00000502066 MAP1LC3BQ9GZQ8 125 aa2.62□□□□□ -1.99
CRNDE-202ENST00000502066 TMEM242Q9NWH2 141 aa2.62□□□□□ -1.99
CRNDE-202ENST00000502066 LAMTOR2Q9Y2Q5 125 aa2.62□□□□□ -1.99
CRNDE-202ENST00000502066 CSDC2Q9Y534 153 aaKnown RBP2.62□□□□□ -1.99
CRNDE-202ENST00000502066 A0A1B0GV50 99 aa2.61□□□□□ -1.99
CRNDE-202ENST00000502066 HINT1P49773 126 aaPredicted RBP2.61□□□□□ -1.99
CRNDE-202ENST00000502066 CKS1BP61024 79 aa2.61□□□□□ -1.99
CRNDE-202ENST00000502066 BAXQ07812 192 aa2.61□□□□□ -1.99
CRNDE-202ENST00000502066 PPP1R1AQ13522 171 aa2.61□□□□□ -1.99
CRNDE-202ENST00000502066 SPATA45Q537H7 98 aa2.61□□□□□ -1.99
CRNDE-202ENST00000502066 C6orf226Q5I0X4 101 aa2.61□□□□□ -1.99
CRNDE-202ENST00000502066 GTF2H5Q6ZYL4 71 aa2.61□□□□□ -1.99
CRNDE-202ENST00000502066 SMIM3Q9BZL3 60 aa2.61□□□□□ -1.99
CRNDE-202ENST00000502066 TIMM9Q9Y5J7 89 aa2.61□□□□□ -1.99
CRNDE-202ENST00000502066 J3QR89 54 aa2.6□□□□□ -1.99
CRNDE-202ENST00000502066 SRP19P09132 144 aaKnown RBP2.6□□□□□ -1.99
CRNDE-202ENST00000502066 SPAG11BQ08648 103 aa2.6□□□□□ -1.99
CRNDE-202ENST00000502066 ADIRFQ15847 76 aa2.6□□□□□ -1.99
CRNDE-202ENST00000502066 FAM19A1Q7Z5A9 133 aa2.6□□□□□ -1.99
CRNDE-202ENST00000502066 SFRP2Q96HF1 295 aa2.6□□□□□ -1.99
CRNDE-202ENST00000502066 SIGMAR1Q99720 223 aa2.6□□□□□ -1.99
CRNDE-202ENST00000502066 C6orf48Q9UBA6 75 aa2.6□□□□□ -1.99
CRNDE-202ENST00000502066 NAT8Q9UHE5 227 aa2.6□□□□□ -1.99
CRNDE-202ENST00000502066 LSM5Q9Y4Y9 91 aaKnown RBP2.6□□□□□ -1.99
CRNDE-202ENST00000502066 LINC00959A0A1B0GUT2 108 aa2.59□□□□□ -1.99
CRNDE-202ENST00000502066 SNAI2O43623 268 aa2.59□□□□□ -1.99
CRNDE-202ENST00000502066 SFT2D2O95562 160 aa2.59□□□□□ -1.99
CRNDE-202ENST00000502066 KRTDAPP60985 99 aa2.59□□□□□ -1.99
CRNDE-202ENST00000502066 RND3P61587 244 aa2.59□□□□□ -1.99
CRNDE-202ENST00000502066 IAH1Q2TAA2 248 aaPredicted RBP2.59□□□□□ -1.99
CRNDE-202ENST00000502066 C5orf47Q569G3 176 aa2.59□□□□□ -1.99
CRNDE-202ENST00000502066 TMEM128Q5BJH2 165 aa2.59□□□□□ -1.99
CRNDE-202ENST00000502066 UNQ6190/PRO20217Q6UXQ8 127 aa2.59□□□□□ -1.99
CRNDE-202ENST00000502066 SSBP3-AS1Q7Z2R9 100 aa2.59□□□□□ -1.99
CRNDE-202ENST00000502066 BAGE3Q86Y29 109 aa2.59□□□□□ -1.99
CRNDE-202ENST00000502066 BAGE2Q86Y30 109 aa2.59□□□□□ -1.99
CRNDE-202ENST00000502066 BOD1L2Q8IYS8 172 aa2.59□□□□□ -1.99
CRNDE-202ENST00000502066 MRAP2Q96G30 205 aa2.59□□□□□ -1.99
CRNDE-202ENST00000502066 HIGD2AQ9BW72 106 aa2.59□□□□□ -1.99
CRNDE-202ENST00000502066 TRAPPC1Q9Y5R8 145 aa2.59□□□□□ -1.99
CRNDE-202ENST00000502066 A6NDN8 102 aa2.58□□□□□ -2
CRNDE-202ENST00000502066 SMIM17P0DL12 118 aa2.58□□□□□ -2
CRNDE-202ENST00000502066 IGLC3P0DOY3 106 aa2.58□□□□□ -2
CRNDE-202ENST00000502066 S100A4P26447 101 aaKnown RBP2.58□□□□□ -2
CRNDE-202ENST00000502066 SMAGPQ0VAQ4 97 aa2.58□□□□□ -2
CRNDE-202ENST00000502066 PMCHL1Q16048 86 aa2.58□□□□□ -2
CRNDE-202ENST00000502066 Q86TA4 180 aa2.58□□□□□ -2
CRNDE-202ENST00000502066 BORCS7Q96B45 105 aa2.58□□□□□ -2
CRNDE-202ENST00000502066 SMIM7Q9BQ49 75 aa2.58□□□□□ -2
CRNDE-202ENST00000502066 PSMG3Q9BT73 122 aaPredicted RBP2.58□□□□□ -2
CRNDE-202ENST00000502066 MANBALQ9NQG1 85 aa2.58□□□□□ -2
CRNDE-202ENST00000502066 GNG13Q9P2W3 67 aa2.58□□□□□ -2
CRNDE-202ENST00000502066 LENEPQ9Y5L5 61 aa2.58□□□□□ -2
CRNDE-202ENST00000502066 LOC107984156A0A0G2JMH3 177 aa2.57□□□□□ -2
CRNDE-202ENST00000502066 NDUFA1O15239 70 aa2.57□□□□□ -2
CRNDE-202ENST00000502066 PDE6DO43924 150 aa2.57□□□□□ -2
CRNDE-202ENST00000502066 PMCHP20382 165 aa2.57□□□□□ -2
CRNDE-202ENST00000502066 ZNF56Q15929 161 aa2.57□□□□□ -2
CRNDE-202ENST00000502066 FA2HQ7L5A8 372 aa2.57□□□□□ -2
CRNDE-202ENST00000502066 ARL17AQ8IVW1 177 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 346 ms