RNA–Protein interactions for RNA: ENST00000498569.5

NF1-217, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-217ENST00000498569 TMEM126AQ9H061 195 aa2.85□□□□□ -1.95
NF1-217ENST00000498569 VCX2Q9H322 139 aa2.85□□□□□ -1.95
NF1-217ENST00000498569 GEMIN7Q9H840 131 aaKnown RBP2.85□□□□□ -1.95
NF1-217ENST00000498569 OSTCQ9NRP0 149 aa2.85□□□□□ -1.95
NF1-217ENST00000498569 NAT8BQ9UHF3 227 aa2.85□□□□□ -1.95
NF1-217ENST00000498569 ZNF706Q9Y5V0 76 aaPredicted RBP2.85□□□□□ -1.95
NF1-217ENST00000498569 SSPOA2VEC9 5147 aa2.84□□□□□ -1.95
NF1-217ENST00000498569 F8W036 122 aa2.84□□□□□ -1.95
NF1-217ENST00000498569 SCO1O75880 301 aa2.84□□□□□ -1.95
NF1-217ENST00000498569 NPYP01303 97 aa2.84□□□□□ -1.95
NF1-217ENST00000498569 HERVK_113P63121 156 aa2.84□□□□□ -1.95
NF1-217ENST00000498569 SEC11AP67812 179 aa2.84□□□□□ -1.95
NF1-217ENST00000498569 LINC01551Q86U37 167 aa2.84□□□□□ -1.95
NF1-217ENST00000498569 PLEKHB2Q96CS7 222 aa2.84□□□□□ -1.95
NF1-217ENST00000498569 CYSLTR1Q9Y271 337 aa2.84□□□□□ -1.95
NF1-217ENST00000498569 IGLV8-61A0A075B6I0 122 aa2.83□□□□□ -1.96
NF1-217ENST00000498569 A0A1B0GW15 77 aa2.83□□□□□ -1.96
NF1-217ENST00000498569 PPBPP02775 128 aa2.83□□□□□ -1.96
NF1-217ENST00000498569 S100A8P05109 93 aa2.83□□□□□ -1.96
NF1-217ENST00000498569 FAM74A3Q4VXF1 159 aa2.83□□□□□ -1.96
NF1-217ENST00000498569 LCE3CQ5T5A8 94 aa2.83□□□□□ -1.96
NF1-217ENST00000498569 ZC2HC1BQ5TFG8 222 aa2.83□□□□□ -1.96
NF1-217ENST00000498569 COX6B2Q6YFQ2 88 aa2.83□□□□□ -1.96
NF1-217ENST00000498569 COX7B2Q8TF08 81 aa2.83□□□□□ -1.96
NF1-217ENST00000498569 SPRR4Q96PI1 79 aa2.83□□□□□ -1.96
NF1-217ENST00000498569 CDKN2A-AS1Q9UH64 79 aa2.83□□□□□ -1.96
NF1-217ENST00000498569 LOC389332A0A1B0GUA5 103 aa2.82□□□□□ -1.96
NF1-217ENST00000498569 M0R378 163 aa2.82□□□□□ -1.96
NF1-217ENST00000498569 SLC25A20O43772 301 aa2.82□□□□□ -1.96
NF1-217ENST00000498569 RPL24P83731 157 aaKnown RBP2.82□□□□□ -1.96
NF1-217ENST00000498569 KRTAP19-2Q3LHN2 52 aa2.82□□□□□ -1.96
NF1-217ENST00000498569 PCOTHQ58A44 107 aa2.82□□□□□ -1.96
NF1-217ENST00000498569 PAPPA-AS1Q5QFB9 102 aa2.82□□□□□ -1.96
NF1-217ENST00000498569 MRPL54Q6P161 138 aaKnown RBP2.82□□□□□ -1.96
NF1-217ENST00000498569 C2orf66Q6UXQ4 117 aa2.82□□□□□ -1.96
NF1-217ENST00000498569 KRTAP5-2Q701N4 177 aa2.82□□□□□ -1.96
NF1-217ENST00000498569 ORMDL3Q8N138 153 aa2.82□□□□□ -1.96
NF1-217ENST00000498569 PRELID3AQ96N28 172 aa2.82□□□□□ -1.96
NF1-217ENST00000498569 AMELXQ99217 191 aa2.82□□□□□ -1.96
NF1-217ENST00000498569 V9GYV3 84 aa2.82□□□□□ -1.96
NF1-217ENST00000498569 SMIM27A0A1W2PRY6 76 aa2.81□□□□□ -1.96
NF1-217ENST00000498569 ATP5LO75964 103 aa2.81□□□□□ -1.96
NF1-217ENST00000498569 PFN2P35080 140 aa2.81□□□□□ -1.96
NF1-217ENST00000498569 RAB14P61106 215 aa2.81□□□□□ -1.96
NF1-217ENST00000498569 ADIRFQ15847 76 aa2.81□□□□□ -1.96
NF1-217ENST00000498569 RGS21Q2M5E4 152 aa2.81□□□□□ -1.96
NF1-217ENST00000498569 PDZD11Q5EBL8 140 aa2.81□□□□□ -1.96
NF1-217ENST00000498569 FAM19A3Q7Z5A8 133 aa2.81□□□□□ -1.96
NF1-217ENST00000498569 AKAP14Q86UN6 197 aa2.81□□□□□ -1.96
NF1-217ENST00000498569 Q8N377 158 aa2.81□□□□□ -1.96
NF1-217ENST00000498569 MAP1LC3AQ9H492 121 aa2.81□□□□□ -1.96
NF1-217ENST00000498569 USH2AO75445 5202 aa2.81□□□□□ -1.96
NF1-217ENST00000498569 IGLV9-49A0A0B4J1Y8 123 aa2.8□□□□□ -1.96
NF1-217ENST00000498569 SMIM1B2RUZ4 78 aa2.8□□□□□ -1.96
NF1-217ENST00000498569 VPREB1P12018 145 aa2.8□□□□□ -1.96
NF1-217ENST00000498569 RPS29P62273 56 aaKnown RBP2.8□□□□□ -1.96
NF1-217ENST00000498569 MOBPQ13875 183 aa2.8□□□□□ -1.96
NF1-217ENST00000498569 ORMDL2Q53FV1 153 aa2.8□□□□□ -1.96
NF1-217ENST00000498569 TMEM136Q6ZRR5 245 aa2.8□□□□□ -1.96
NF1-217ENST00000498569 SLC51BQ86UW2 128 aa2.8□□□□□ -1.96
NF1-217ENST00000498569 BATF3Q9NR55 127 aa2.8□□□□□ -1.96
NF1-217ENST00000498569 SPINK8P0C7L1 97 aa2.79□□□□□ -1.96
NF1-217ENST00000498569 SMIM29Q86T20 159 aa2.79□□□□□ -1.96
NF1-217ENST00000498569 Q8N8P6 123 aa2.79□□□□□ -1.96
NF1-217ENST00000498569 TIMM17AQ99595 171 aa2.79□□□□□ -1.96
NF1-217ENST00000498569 LAMTOR2Q9Y2Q5 125 aa2.79□□□□□ -1.96
NF1-217ENST00000498569 ETDCA0A1B0GVM5 59 aa2.78□□□□□ -1.96
NF1-217ENST00000498569 TINCRA0A1B0GVN0 87 aa2.78□□□□□ -1.96
NF1-217ENST00000498569 A0A1B0GXF2 115 aa2.78□□□□□ -1.96
NF1-217ENST00000498569 C9orf92A6NGG3 77 aa2.78□□□□□ -1.96
NF1-217ENST00000498569 IGIPA6NJ69 53 aa2.78□□□□□ -1.96
NF1-217ENST00000498569 H3BRM9 83 aa2.78□□□□□ -1.96
NF1-217ENST00000498569 K7EMI3 77 aa2.78□□□□□ -1.96
NF1-217ENST00000498569 G0S2P27469 103 aa2.78□□□□□ -1.96
NF1-217ENST00000498569 RPL23P62829 140 aaKnown RBP2.78□□□□□ -1.96
NF1-217ENST00000498569 GAGE2AQ6NT46 116 aa2.78□□□□□ -1.96
NF1-217ENST00000498569 SND1-IT1Q9HBX3 110 aa2.78□□□□□ -1.96
NF1-217ENST00000498569 ERG28Q9UKR5 140 aa2.78□□□□□ -1.96
NF1-217ENST00000498569 SRP19P09132 144 aaKnown RBP2.77□□□□□ -1.97
NF1-217ENST00000498569 COX17Q14061 63 aa2.77□□□□□ -1.97
NF1-217ENST00000498569 LINC00483Q53H64 154 aa2.77□□□□□ -1.97
NF1-217ENST00000498569 LCE3AQ5TA76 89 aa2.77□□□□□ -1.97
NF1-217ENST00000498569 C9orf153Q5TBE3 101 aa2.77□□□□□ -1.97
NF1-217ENST00000498569 ALKAL2Q6UX46 152 aa2.77□□□□□ -1.97
NF1-217ENST00000498569 ATP5L2Q7Z4Y8 100 aa2.77□□□□□ -1.97
NF1-217ENST00000498569 SMCR5Q8TEV8 140 aa2.77□□□□□ -1.97
NF1-217ENST00000498569 NAT8Q9UHE5 227 aa2.77□□□□□ -1.97
NF1-217ENST00000498569 FCGBPQ9Y6R7 5405 aaPredicted RBP2.77□□□□□ -1.97
NF1-217ENST00000498569 IGLV5-45A0A087WSX0 123 aa2.76□□□□□ -1.97
NF1-217ENST00000498569 S100A12P80511 92 aa2.76□□□□□ -1.97
NF1-217ENST00000498569 SSBP3-AS1Q7Z2R9 100 aa2.76□□□□□ -1.97
NF1-217ENST00000498569 ERASQ7Z444 233 aa2.76□□□□□ -1.97
NF1-217ENST00000498569 ZNF625Q96I27 306 aaPredicted RBP2.76□□□□□ -1.97
NF1-217ENST00000498569 SCGB3A1Q96QR1 104 aa2.76□□□□□ -1.97
NF1-217ENST00000498569 LIMD2Q9BT23 127 aa2.76□□□□□ -1.97
NF1-217ENST00000498569 NXT2Q9NPJ8 142 aaKnown RBP2.76□□□□□ -1.97
NF1-217ENST00000498569 NCR3O14931 201 aa2.75□□□□□ -1.97
NF1-217ENST00000498569 CFC1P0CG37 223 aa2.75□□□□□ -1.97
NF1-217ENST00000498569 Q8NDZ9 215 aa2.75□□□□□ -1.97
NF1-217ENST00000498569 TOMM6Q96B49 74 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms