RNA–Protein interactions for RNA: ENST00000498519.5

SHANK2-217, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-217ENST00000498519 LINC01549A6NIU2 74 aa7.95□□□□□ -1.14
SHANK2-217ENST00000498519 COX7B2Q8TF08 81 aa7.95□□□□□ -1.14
SHANK2-217ENST00000498519 ANAPC11Q9NYG5 84 aa7.95□□□□□ -1.14
SHANK2-217ENST00000498519 KRTAP13-2Q52LG2 175 aa7.94□□□□□ -1.14
SHANK2-217ENST00000498519 KRTAP13-1Q8IUC0 172 aa7.94□□□□□ -1.14
SHANK2-217ENST00000498519 HIST1H2BLQ99880 126 aa7.94□□□□□ -1.14
SHANK2-217ENST00000498519 RETNLBQ9BQ08 111 aa7.94□□□□□ -1.14
SHANK2-217ENST00000498519 TINCRA0A1B0GVN0 87 aa7.93□□□□□ -1.14
SHANK2-217ENST00000498519 SMIM1B2RUZ4 78 aa7.93□□□□□ -1.14
SHANK2-217ENST00000498519 ERASQ7Z444 233 aa7.93□□□□□ -1.14
SHANK2-217ENST00000498519 TOMM6Q96B49 74 aa7.93□□□□□ -1.14
SHANK2-217ENST00000498519 HSBP1O75506 76 aa7.92□□□□□ -1.14
SHANK2-217ENST00000498519 ATP5LO75964 103 aa7.92□□□□□ -1.14
SHANK2-217ENST00000498519 SPAG11AQ6PDA7 123 aa7.91□□□□□ -1.14
SHANK2-217ENST00000498519 CHCHD1Q96BP2 118 aaKnown RBP7.91□□□□□ -1.14
SHANK2-217ENST00000498519 SCGB3A1Q96QR1 104 aa7.91□□□□□ -1.14
SHANK2-217ENST00000498519 MUC17Q685J3 4493 aa7.91□□□□□ -1.14
SHANK2-217ENST00000498519 IGKV2-28A0A075B6P5 120 aa7.9□□□□□ -1.14
SHANK2-217ENST00000498519 IGLV5-45A0A087WSX0 123 aa7.9□□□□□ -1.14
SHANK2-217ENST00000498519 TSTD3H0UI37 97 aa7.9□□□□□ -1.14
SHANK2-217ENST00000498519 H3BRM9 83 aa7.9□□□□□ -1.14
SHANK2-217ENST00000498519 SERF1AO75920 110 aa7.9□□□□□ -1.14
SHANK2-217ENST00000498519 IGKV2D-28P01615 120 aa7.9□□□□□ -1.14
SHANK2-217ENST00000498519 JOSD1Q15040 202 aaPredicted RBP7.9□□□□□ -1.14
SHANK2-217ENST00000498519 RPL24P83731 157 aaKnown RBP7.89□□□□□ -1.15
SHANK2-217ENST00000498519 FAM19A1Q7Z5A9 133 aa7.89□□□□□ -1.15
SHANK2-217ENST00000498519 C18orf32Q8TCD1 76 aa7.89□□□□□ -1.15
SHANK2-217ENST00000498519 PPDPFQ9H3Y8 114 aa7.89□□□□□ -1.15
SHANK2-217ENST00000498519 C20orf202A1L168 122 aa7.88□□□□□ -1.15
SHANK2-217ENST00000498519 KIAA1644Q3SXP7 199 aa7.88□□□□□ -1.15
SHANK2-217ENST00000498519 FP248Q71RG6 208 aaPredicted RBP7.88□□□□□ -1.15
SHANK2-217ENST00000498519 SCGB1D1O95968 90 aa7.87□□□□□ -1.15
SHANK2-217ENST00000498519 C4orf48Q5BLP8 95 aa7.87□□□□□ -1.15
SHANK2-217ENST00000498519 FA2HQ7L5A8 372 aa7.87□□□□□ -1.15
SHANK2-217ENST00000498519 LINC00337Q8N6G1 96 aa7.87□□□□□ -1.15
SHANK2-217ENST00000498519 TMEM126AQ9H061 195 aa7.87□□□□□ -1.15
SHANK2-217ENST00000498519 PRLHP81277 87 aa7.86□□□□□ -1.15
SHANK2-217ENST00000498519 PYY3Q5JQD4 70 aa7.86□□□□□ -1.15
SHANK2-217ENST00000498519 CST9LQ9H4G1 147 aa7.86□□□□□ -1.15
SHANK2-217ENST00000498519 HSPB8Q9UJY1 196 aa7.86□□□□□ -1.15
SHANK2-217ENST00000498519 SPINK8P0C7L1 97 aa7.85□□□□□ -1.15
SHANK2-217ENST00000498519 COX17Q14061 63 aa7.85□□□□□ -1.15
SHANK2-217ENST00000498519 PLEKHB2Q96CS7 222 aa7.85□□□□□ -1.15
SHANK2-217ENST00000498519 PCP4L1A6NKN8 68 aa7.84□□□□□ -1.15
SHANK2-217ENST00000498519 LINC00614P0C842 121 aa7.84□□□□□ -1.15
SHANK2-217ENST00000498519 PFN2P35080 140 aa7.84□□□□□ -1.15
SHANK2-217ENST00000498519 PMVKQ15126 192 aa7.84□□□□□ -1.15
SHANK2-217ENST00000498519 PMCHL1Q16048 86 aa7.84□□□□□ -1.15
SHANK2-217ENST00000498519 SFTA2Q6UW10 78 aa7.84□□□□□ -1.15
SHANK2-217ENST00000498519 ZNF706Q9Y5V0 76 aaPredicted RBP7.84□□□□□ -1.15
SHANK2-217ENST00000498519 LINC01547P58512 204 aaPredicted RBP7.83□□□□□ -1.16
SHANK2-217ENST00000498519 TMEM238C9JI98 176 aa7.82□□□□□ -1.16
SHANK2-217ENST00000498519 VPREB1P12018 145 aa7.82□□□□□ -1.16
SHANK2-217ENST00000498519 SND1-IT1Q9HBX3 110 aa7.82□□□□□ -1.16
SHANK2-217ENST00000498519 ERG28Q9UKR5 140 aa7.82□□□□□ -1.16
SHANK2-217ENST00000498519 M0R378 163 aa7.81□□□□□ -1.16
SHANK2-217ENST00000498519 LEPROTL1O95214 131 aa7.81□□□□□ -1.16
SHANK2-217ENST00000498519 KRTDAPP60985 99 aa7.81□□□□□ -1.16
SHANK2-217ENST00000498519 VAMP8Q9BV40 100 aa7.81□□□□□ -1.16
SHANK2-217ENST00000498519 HIGD2AQ9BW72 106 aa7.81□□□□□ -1.16
SHANK2-217ENST00000498519 MAP1LC3CQ9BXW4 147 aa7.81□□□□□ -1.16
SHANK2-217ENST00000498519 LINC01546A6NGU7 62 aa7.8□□□□□ -1.16
SHANK2-217ENST00000498519 IGLV5-39A0A0G2JS06 123 aa7.79□□□□□ -1.16
SHANK2-217ENST00000498519 HSBP1L1C9JCN9 74 aa7.79□□□□□ -1.16
SHANK2-217ENST00000498519 LINC00310P59036 64 aa7.79□□□□□ -1.16
SHANK2-217ENST00000498519 SEC61BP60468 96 aaKnown RBP7.79□□□□□ -1.16
SHANK2-217ENST00000498519 ASB16-AS1Q495Z4 193 aa7.79□□□□□ -1.16
SHANK2-217ENST00000498519 C3orf22Q8N5N4 141 aa7.79□□□□□ -1.16
SHANK2-217ENST00000498519 NDUFA12Q9UI09 145 aa7.79□□□□□ -1.16
SHANK2-217ENST00000498519 SPINK1P00995 79 aa7.78□□□□□ -1.16
SHANK2-217ENST00000498519 HBDP02042 147 aa7.78□□□□□ -1.16
SHANK2-217ENST00000498519 IGLC3P0DOY3 106 aa7.78□□□□□ -1.16
SHANK2-217ENST00000498519 PET117Q6UWS5 81 aa7.78□□□□□ -1.16
SHANK2-217ENST00000498519 SPRR4Q96PI1 79 aa7.78□□□□□ -1.16
SHANK2-217ENST00000498519 FSIP2Q5CZC0 6907 aa7.78□□□□□ -1.16
SHANK2-217ENST00000498519 C3orf79P0CE67 100 aa7.76□□□□□ -1.17
SHANK2-217ENST00000498519 KRTAP13-3Q3SY46 172 aa7.76□□□□□ -1.17
SHANK2-217ENST00000498519 FAM19A2Q8N3H0 131 aa7.76□□□□□ -1.17
SHANK2-217ENST00000498519 DDTP30046 118 aa7.75□□□□□ -1.17
SHANK2-217ENST00000498519 LCE2DQ5TA82 110 aaPredicted RBP7.74□□□□□ -1.17
SHANK2-217ENST00000498519 Q8NBF4 154 aa7.74□□□□□ -1.17
SHANK2-217ENST00000498519 SYS1-DBNDD2H3BUS1 97 aa7.73□□□□□ -1.17
SHANK2-217ENST00000498519 ZNF22P17026 224 aaPredicted RBP7.73□□□□□ -1.17
SHANK2-217ENST00000498519 DAND5Q8N907 189 aa7.73□□□□□ -1.17
SHANK2-217ENST00000498519 ZNF625Q96I27 306 aaPredicted RBP7.73□□□□□ -1.17
SHANK2-217ENST00000498519 PRYO14603 147 aa7.72□□□□□ -1.17
SHANK2-217ENST00000498519 LINC00158P58513 81 aa7.72□□□□□ -1.17
SHANK2-217ENST00000498519 RPS29P62273 56 aaKnown RBP7.71□□□□□ -1.18
SHANK2-217ENST00000498519 SPATA45Q537H7 98 aa7.71□□□□□ -1.18
SHANK2-217ENST00000498519 UQCR10Q9UDW1 63 aa7.71□□□□□ -1.18
SHANK2-217ENST00000498519 TMEM170BQ5T4T1 132 aa7.7□□□□□ -1.18
SHANK2-217ENST00000498519 IFI27L1Q96BM0 104 aa7.7□□□□□ -1.18
SHANK2-217ENST00000498519 URB1-AS1Q96HZ7 61 aa7.7□□□□□ -1.18
SHANK2-217ENST00000498519 MIEN1Q9BRT3 115 aa7.7□□□□□ -1.18
SHANK2-217ENST00000498519 PRO1933Q9H354 126 aa7.7□□□□□ -1.18
SHANK2-217ENST00000498519 PAM16Q9Y3D7 125 aa7.7□□□□□ -1.18
SHANK2-217ENST00000498519 ETDCA0A1B0GVM5 59 aa7.69□□□□□ -1.18
SHANK2-217ENST00000498519 Q8NDZ9 215 aa7.69□□□□□ -1.18
SHANK2-217ENST00000498519 PMCHL2Q9BQD1 86 aa7.69□□□□□ -1.18
SHANK2-217ENST00000498519 LINC00587B1AMM8 73 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms