RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 UBE2AP49459 152 aa10.11□□□□□ -0.79
SMC4-226ENST00000497311 LINC00310P59036 64 aa10.11□□□□□ -0.79
SMC4-226ENST00000497311 PFN2P35080 140 aa10.1□□□□□ -0.79
SMC4-226ENST00000497311 TMEM170BQ5T4T1 132 aa10.1□□□□□ -0.79
SMC4-226ENST00000497311 ANAPC11Q9NYG5 84 aa10.09□□□□□ -0.79
SMC4-226ENST00000497311 MUC2Q02817 5179 aa10.08□□□□□ -0.8
SMC4-226ENST00000497311 IGKV2-28A0A075B6P5 120 aa10.08□□□□□ -0.8
SMC4-226ENST00000497311 IGKV2D-28P01615 120 aa10.08□□□□□ -0.8
SMC4-226ENST00000497311 KRTAP13-1Q8IUC0 172 aa10.08□□□□□ -0.8
SMC4-226ENST00000497311 LEPROTL1O95214 131 aa10.07□□□□□ -0.8
SMC4-226ENST00000497311 C4orf48Q5BLP8 95 aa10.07□□□□□ -0.8
SMC4-226ENST00000497311 ERG28Q9UKR5 140 aa10.06□□□□□ -0.8
SMC4-226ENST00000497311 COX17Q14061 63 aa10.05□□□□□ -0.8
SMC4-226ENST00000497311 SND1-IT1Q9HBX3 110 aa10.05□□□□□ -0.8
SMC4-226ENST00000497311 TMEM223A0PJW6 202 aa10.04□□□□□ -0.8
SMC4-226ENST00000497311 VPREB1P12018 145 aa10.04□□□□□ -0.8
SMC4-226ENST00000497311 RPL24P83731 157 aaKnown RBP10.04□□□□□ -0.8
SMC4-226ENST00000497311 FAM229BQ4G0N7 80 aa10.04□□□□□ -0.8
SMC4-226ENST00000497311 KRTAP13-2Q52LG2 175 aa10.04□□□□□ -0.8
SMC4-226ENST00000497311 LCE2CQ5TA81 110 aa10.04□□□□□ -0.8
SMC4-226ENST00000497311 SFTA2Q6UW10 78 aa10.04□□□□□ -0.8
SMC4-226ENST00000497311 HSPB8Q9UJY1 196 aa10.04□□□□□ -0.8
SMC4-226ENST00000497311 H0Y8G0 127 aa10.02□□□□□ -0.81
SMC4-226ENST00000497311 HIST1H2BKO60814 126 aa10.02□□□□□ -0.81
SMC4-226ENST00000497311 HIST1H2BJP06899 126 aa10.02□□□□□ -0.81
SMC4-226ENST00000497311 FABP4P15090 132 aa10.02□□□□□ -0.81
SMC4-226ENST00000497311 HIST1H2BOP23527 126 aa10.02□□□□□ -0.81
SMC4-226ENST00000497311 HIST1H2BBP33778 126 aa10.02□□□□□ -0.81
SMC4-226ENST00000497311 HIST1H2BDP58876 126 aa10.02□□□□□ -0.81
SMC4-226ENST00000497311 HIST1H2BCP62807 126 aa10.02□□□□□ -0.81
SMC4-226ENST00000497311 PRLHP81277 87 aa10.02□□□□□ -0.81
SMC4-226ENST00000497311 HIST2H2BEQ16778 126 aa10.02□□□□□ -0.81
SMC4-226ENST00000497311 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.02□□□□□ -0.81
SMC4-226ENST00000497311 FAM19A1Q7Z5A9 133 aa10.02□□□□□ -0.81
SMC4-226ENST00000497311 HIST1H2BHQ93079 126 aa10.02□□□□□ -0.81
SMC4-226ENST00000497311 ZNF625Q96I27 306 aaPredicted RBP10.02□□□□□ -0.81
SMC4-226ENST00000497311 HIST1H2BNQ99877 126 aa10.02□□□□□ -0.81
SMC4-226ENST00000497311 HIST1H2BMQ99879 126 aa10.02□□□□□ -0.81
SMC4-226ENST00000497311 TMEM126AQ9H061 195 aa10.02□□□□□ -0.81
SMC4-226ENST00000497311 IGKV2D-26A0A0A0MRZ7 120 aa10□□□□□ -0.81
SMC4-226ENST00000497311 TMEM238C9JI98 176 aa10□□□□□ -0.81
SMC4-226ENST00000497311 LINC00304Q8N9R0 145 aa10□□□□□ -0.81
SMC4-226ENST00000497311 M0R378 163 aa9.98□□□□□ -0.81
SMC4-226ENST00000497311 PLNP26678 52 aa9.98□□□□□ -0.81
SMC4-226ENST00000497311 A0A0U1RQV1 116 aa9.97□□□□□ -0.81
SMC4-226ENST00000497311 Q8NDZ9 215 aa9.97□□□□□ -0.81
SMC4-226ENST00000497311 MAP1LC3CQ9BXW4 147 aa9.97□□□□□ -0.81
SMC4-226ENST00000497311 DPM2O94777 84 aa9.96□□□□□ -0.82
SMC4-226ENST00000497311 LINC00158P58513 81 aa9.96□□□□□ -0.82
SMC4-226ENST00000497311 PLEKHB2Q96CS7 222 aa9.96□□□□□ -0.82
SMC4-226ENST00000497311 RETNLBQ9BQ08 111 aa9.96□□□□□ -0.82
SMC4-226ENST00000497311 PMCHL2Q9BQD1 86 aa9.94□□□□□ -0.82
SMC4-226ENST00000497311 IGKCP01834 107 aa9.93□□□□□ -0.82
SMC4-226ENST00000497311 HERV-K104P63124 156 aa9.93□□□□□ -0.82
SMC4-226ENST00000497311 CTAG1AP78358 180 aa9.93□□□□□ -0.82
SMC4-226ENST00000497311 A0A0U1RRA0 63 aa9.92□□□□□ -0.82
SMC4-226ENST00000497311 COA6Q5JTJ3 125 aaKnown RBP9.92□□□□□ -0.82
SMC4-226ENST00000497311 HIGD2AQ9BW72 106 aa9.92□□□□□ -0.82
SMC4-226ENST00000497311 NDUFA12Q9UI09 145 aa9.92□□□□□ -0.82
SMC4-226ENST00000497311 SYS1-DBNDD2H3BUS1 97 aa9.91□□□□□ -0.82
SMC4-226ENST00000497311 LEPROTO15243 131 aa9.91□□□□□ -0.82
SMC4-226ENST00000497311 HERVK_113P61574 105 aa9.91□□□□□ -0.82
SMC4-226ENST00000497311 C3orf22Q8N5N4 141 aa9.91□□□□□ -0.82
SMC4-226ENST00000497311 MYMXA0A1B0GTQ4 84 aa9.9□□□□□ -0.82
SMC4-226ENST00000497311 TSPEAR-AS2P59090 65 aa9.9□□□□□ -0.82
SMC4-226ENST00000497311 LINC00587B1AMM8 73 aa9.89□□□□□ -0.83
SMC4-226ENST00000497311 SMIM13P0DJ93 91 aa9.89□□□□□ -0.83
SMC4-226ENST00000497311 MEIG1Q5JSS6 88 aa9.89□□□□□ -0.83
SMC4-226ENST00000497311 CDIP1Q9H305 208 aa9.89□□□□□ -0.83
SMC4-226ENST00000497311 IGLV7-46A0A075B6I9 117 aa9.88□□□□□ -0.83
SMC4-226ENST00000497311 J3QQQ9 107 aa9.88□□□□□ -0.83
SMC4-226ENST00000497311 TPRXLQ17RH7 258 aa9.88□□□□□ -0.83
SMC4-226ENST00000497311 MUC17Q685J3 4493 aa9.88□□□□□ -0.83
SMC4-226ENST00000497311 SPRR4Q96PI1 79 aa9.87□□□□□ -0.83
SMC4-226ENST00000497311 NMUP48645 174 aa9.86□□□□□ -0.83
SMC4-226ENST00000497311 LINC01545Q5VT33 79 aa9.86□□□□□ -0.83
SMC4-226ENST00000497311 SPAG11AQ6PDA7 123 aa9.86□□□□□ -0.83
SMC4-226ENST00000497311 PET117Q6UWS5 81 aa9.86□□□□□ -0.83
SMC4-226ENST00000497311 BOD1L2Q8IYS8 172 aa9.86□□□□□ -0.83
SMC4-226ENST00000497311 MIR7-3HGQ8N6C7 128 aa9.86□□□□□ -0.83
SMC4-226ENST00000497311 ZNF706Q9Y5V0 76 aaPredicted RBP9.86□□□□□ -0.83
SMC4-226ENST00000497311 PRYO14603 147 aa9.85□□□□□ -0.83
SMC4-226ENST00000497311 LGALS3P17931 250 aaKnown RBP9.85□□□□□ -0.83
SMC4-226ENST00000497311 E9PLD3 99 aa9.84□□□□□ -0.83
SMC4-226ENST00000497311 C3orf79P0CE67 100 aa9.84□□□□□ -0.83
SMC4-226ENST00000497311 NCR3O14931 201 aa9.83□□□□□ -0.84
SMC4-226ENST00000497311 SPRR1AP35321 89 aa9.82□□□□□ -0.84
SMC4-226ENST00000497311 LINC00337Q8N6G1 96 aa9.82□□□□□ -0.84
SMC4-226ENST00000497311 PPDPFQ9H3Y8 114 aa9.82□□□□□ -0.84
SMC4-226ENST00000497311 KCNQ1DNQ9H478 68 aa9.82□□□□□ -0.84
SMC4-226ENST00000497311 FAT4Q6V0I7 4981 aa9.82□□□□□ -0.84
SMC4-226ENST00000497311 ETDCA0A1B0GVM5 59 aa9.81□□□□□ -0.84
SMC4-226ENST00000497311 LORP23490 312 aaPredicted RBP9.8□□□□□ -0.84
SMC4-226ENST00000497311 KRTDAPP60985 99 aa9.8□□□□□ -0.84
SMC4-226ENST00000497311 SMCR5Q8TEV8 140 aa9.8□□□□□ -0.84
SMC4-226ENST00000497311 TMA7Q9Y2S6 64 aaKnown RBP9.8□□□□□ -0.84
SMC4-226ENST00000497311 LOC107984156A0A0G2JMH3 177 aa9.79□□□□□ -0.84
SMC4-226ENST00000497311 TRBV10-3A0A0K0K1G6 114 aa9.79□□□□□ -0.84
SMC4-226ENST00000497311 S100A12P80511 92 aa9.79□□□□□ -0.84
SMC4-226ENST00000497311 ARL17AQ8IVW1 177 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms