RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 LINC00310P59036 64 aa9.84□□□□□ -0.83
TRAPPC3-207ENST00000497251 LINC00304Q8N9R0 145 aa9.84□□□□□ -0.83
TRAPPC3-207ENST00000497251 IGKV2D-26A0A0A0MRZ7 120 aa9.83□□□□□ -0.84
TRAPPC3-207ENST00000497251 TMEM223A0PJW6 202 aa9.83□□□□□ -0.84
TRAPPC3-207ENST00000497251 LEPROTL1O95214 131 aa9.83□□□□□ -0.84
TRAPPC3-207ENST00000497251 ERG28Q9UKR5 140 aa9.83□□□□□ -0.84
TRAPPC3-207ENST00000497251 GAGE10A6NGK3 116 aa9.82□□□□□ -0.84
TRAPPC3-207ENST00000497251 PFN2P35080 140 aa9.82□□□□□ -0.84
TRAPPC3-207ENST00000497251 TPRXLQ17RH7 258 aa9.82□□□□□ -0.84
TRAPPC3-207ENST00000497251 ZNF625Q96I27 306 aaPredicted RBP9.82□□□□□ -0.84
TRAPPC3-207ENST00000497251 RPL24P83731 157 aaKnown RBP9.81□□□□□ -0.84
TRAPPC3-207ENST00000497251 KRTAP13-2Q52LG2 175 aa9.81□□□□□ -0.84
TRAPPC3-207ENST00000497251 HSPB8Q9UJY1 196 aa9.81□□□□□ -0.84
TRAPPC3-207ENST00000497251 SND1-IT1Q9HBX3 110 aa9.79□□□□□ -0.84
TRAPPC3-207ENST00000497251 LCE2AQ5TA79 106 aaPredicted RBP9.78□□□□□ -0.84
TRAPPC3-207ENST00000497251 KRTAP9-2Q9BYQ4 174 aa9.78□□□□□ -0.84
TRAPPC3-207ENST00000497251 CDIP1Q9H305 208 aa9.78□□□□□ -0.84
TRAPPC3-207ENST00000497251 ANAPC11Q9NYG5 84 aa9.78□□□□□ -0.84
TRAPPC3-207ENST00000497251 H0Y8G0 127 aa9.77□□□□□ -0.85
TRAPPC3-207ENST00000497251 PLNP26678 52 aa9.77□□□□□ -0.85
TRAPPC3-207ENST00000497251 SPAG11AQ6PDA7 123 aa9.77□□□□□ -0.85
TRAPPC3-207ENST00000497251 IGLV7-46A0A075B6I9 117 aa9.76□□□□□ -0.85
TRAPPC3-207ENST00000497251 IGKV2-28A0A075B6P5 120 aa9.76□□□□□ -0.85
TRAPPC3-207ENST00000497251 IGKV2D-28P01615 120 aa9.76□□□□□ -0.85
TRAPPC3-207ENST00000497251 TMEM126AQ9H061 195 aa9.76□□□□□ -0.85
TRAPPC3-207ENST00000497251 SCO1O75880 301 aa9.75□□□□□ -0.85
TRAPPC3-207ENST00000497251 VPREB1P12018 145 aa9.75□□□□□ -0.85
TRAPPC3-207ENST00000497251 HERV-K104P63124 156 aa9.75□□□□□ -0.85
TRAPPC3-207ENST00000497251 HIST1H2BKO60814 126 aa9.74□□□□□ -0.85
TRAPPC3-207ENST00000497251 HIST1H2BJP06899 126 aa9.74□□□□□ -0.85
TRAPPC3-207ENST00000497251 FABP4P15090 132 aa9.74□□□□□ -0.85
TRAPPC3-207ENST00000497251 HIST1H2BOP23527 126 aa9.74□□□□□ -0.85
TRAPPC3-207ENST00000497251 HIST1H2BBP33778 126 aa9.74□□□□□ -0.85
TRAPPC3-207ENST00000497251 HIST1H2BDP58876 126 aa9.74□□□□□ -0.85
TRAPPC3-207ENST00000497251 HIST1H2BCP62807 126 aa9.74□□□□□ -0.85
TRAPPC3-207ENST00000497251 HIST2H2BEQ16778 126 aa9.74□□□□□ -0.85
TRAPPC3-207ENST00000497251 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC3-207ENST00000497251 FAM19A1Q7Z5A9 133 aa9.74□□□□□ -0.85
TRAPPC3-207ENST00000497251 HIST1H2BHQ93079 126 aa9.74□□□□□ -0.85
TRAPPC3-207ENST00000497251 HIST1H2BNQ99877 126 aa9.74□□□□□ -0.85
TRAPPC3-207ENST00000497251 HIST1H2BMQ99879 126 aa9.74□□□□□ -0.85
TRAPPC3-207ENST00000497251 FAT4Q6V0I7 4981 aa9.73□□□□□ -0.85
TRAPPC3-207ENST00000497251 LINC00587B1AMM8 73 aa9.73□□□□□ -0.85
TRAPPC3-207ENST00000497251 DPM2O94777 84 aa9.73□□□□□ -0.85
TRAPPC3-207ENST00000497251 LINC00158P58513 81 aa9.73□□□□□ -0.85
TRAPPC3-207ENST00000497251 PLEKHB2Q96CS7 222 aa9.73□□□□□ -0.85
TRAPPC3-207ENST00000497251 PRLHP81277 87 aa9.72□□□□□ -0.85
TRAPPC3-207ENST00000497251 RETNLBQ9BQ08 111 aa9.72□□□□□ -0.85
TRAPPC3-207ENST00000497251 MAP1LC3CQ9BXW4 147 aa9.72□□□□□ -0.85
TRAPPC3-207ENST00000497251 NDUFA12Q9UI09 145 aa9.72□□□□□ -0.85
TRAPPC3-207ENST00000497251 MYMXA0A1B0GTQ4 84 aa9.71□□□□□ -0.86
TRAPPC3-207ENST00000497251 M0R378 163 aa9.71□□□□□ -0.86
TRAPPC3-207ENST00000497251 HERVK_113P61574 105 aa9.71□□□□□ -0.86
TRAPPC3-207ENST00000497251 FP248Q71RG6 208 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC3-207ENST00000497251 LEPROTO15243 131 aa9.7□□□□□ -0.86
TRAPPC3-207ENST00000497251 IGKCP01834 107 aa9.7□□□□□ -0.86
TRAPPC3-207ENST00000497251 MEIG1Q5JSS6 88 aa9.7□□□□□ -0.86
TRAPPC3-207ENST00000497251 ATP6V1G1O75348 118 aa9.69□□□□□ -0.86
TRAPPC3-207ENST00000497251 SMIM13P0DJ93 91 aa9.69□□□□□ -0.86
TRAPPC3-207ENST00000497251 ZNF706Q9Y5V0 76 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC3-207ENST00000497251 A0A0U1RRA0 63 aa9.68□□□□□ -0.86
TRAPPC3-207ENST00000497251 TMEM238C9JI98 176 aa9.68□□□□□ -0.86
TRAPPC3-207ENST00000497251 Q8NDZ9 215 aa9.68□□□□□ -0.86
TRAPPC3-207ENST00000497251 PPDPFQ9H3Y8 114 aa9.68□□□□□ -0.86
TRAPPC3-207ENST00000497251 NMUP48645 174 aa9.67□□□□□ -0.86
TRAPPC3-207ENST00000497251 TSPEAR-AS2P59090 65 aa9.67□□□□□ -0.86
TRAPPC3-207ENST00000497251 C4orf48Q5BLP8 95 aa9.67□□□□□ -0.86
TRAPPC3-207ENST00000497251 PMCHL2Q9BQD1 86 aa9.67□□□□□ -0.86
TRAPPC3-207ENST00000497251 J3QQQ9 107 aa9.66□□□□□ -0.86
TRAPPC3-207ENST00000497251 MIR7-3HGQ8N6C7 128 aa9.66□□□□□ -0.86
TRAPPC3-207ENST00000497251 SYS1-DBNDD2H3BUS1 97 aa9.65□□□□□ -0.86
TRAPPC3-207ENST00000497251 LGALS3P17931 250 aaKnown RBP9.64□□□□□ -0.87
TRAPPC3-207ENST00000497251 COA6Q5JTJ3 125 aaKnown RBP9.64□□□□□ -0.87
TRAPPC3-207ENST00000497251 BOD1L2Q8IYS8 172 aa9.64□□□□□ -0.87
TRAPPC3-207ENST00000497251 SPRR4Q96PI1 79 aa9.64□□□□□ -0.87
TRAPPC3-207ENST00000497251 HIGD2AQ9BW72 106 aa9.64□□□□□ -0.87
TRAPPC3-207ENST00000497251 C3orf22Q8N5N4 141 aa9.63□□□□□ -0.87
TRAPPC3-207ENST00000497251 LOC107984156A0A0G2JMH3 177 aa9.62□□□□□ -0.87
TRAPPC3-207ENST00000497251 E9PLD3 99 aa9.62□□□□□ -0.87
TRAPPC3-207ENST00000497251 LINC01545Q5VT33 79 aa9.62□□□□□ -0.87
TRAPPC3-207ENST00000497251 PET117Q6UWS5 81 aa9.62□□□□□ -0.87
TRAPPC3-207ENST00000497251 ARL17AQ8IVW1 177 aa9.62□□□□□ -0.87
TRAPPC3-207ENST00000497251 LINC00337Q8N6G1 96 aa9.62□□□□□ -0.87
TRAPPC3-207ENST00000497251 MUC17Q685J3 4493 aa9.62□□□□□ -0.87
TRAPPC3-207ENST00000497251 SPINK1P00995 79 aa9.61□□□□□ -0.87
TRAPPC3-207ENST00000497251 PRYO14603 147 aa9.6□□□□□ -0.87
TRAPPC3-207ENST00000497251 S100A12P80511 92 aa9.58□□□□□ -0.88
TRAPPC3-207ENST00000497251 KCNQ1DNQ9H478 68 aa9.58□□□□□ -0.88
TRAPPC3-207ENST00000497251 NCR3O14931 201 aa9.57□□□□□ -0.88
TRAPPC3-207ENST00000497251 SPRR1AP35321 89 aa9.57□□□□□ -0.88
TRAPPC3-207ENST00000497251 ASB16-AS1Q495Z4 193 aa9.57□□□□□ -0.88
TRAPPC3-207ENST00000497251 DAND5Q8N907 189 aa9.57□□□□□ -0.88
TRAPPC3-207ENST00000497251 MIEN1Q9BRT3 115 aa9.57□□□□□ -0.88
TRAPPC3-207ENST00000497251 TRBV10-2A0A0K0K1G8 114 aa9.56□□□□□ -0.88
TRAPPC3-207ENST00000497251 KRTAP9-6A0A140TA67 174 aa9.56□□□□□ -0.88
TRAPPC3-207ENST00000497251 C3orf79P0CE67 100 aa9.56□□□□□ -0.88
TRAPPC3-207ENST00000497251 RPS29P62273 56 aaKnown RBP9.56□□□□□ -0.88
TRAPPC3-207ENST00000497251 KRTAP13-3Q3SY46 172 aa9.56□□□□□ -0.88
TRAPPC3-207ENST00000497251 A0A0J9YXY3 114 aa9.55□□□□□ -0.88
TRAPPC3-207ENST00000497251 S100A1P23297 94 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms