RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 C10orf25Q5T742 122 aa4.76□□□□□ -1.65
CDHR3-214ENST00000496633 ZC2HC1BQ5TFG8 222 aa4.76□□□□□ -1.65
CDHR3-214ENST00000496633 URB1-AS1Q96HZ7 61 aa4.76□□□□□ -1.65
CDHR3-214ENST00000496633 GAGE2DQ9UEU5 116 aa4.76□□□□□ -1.65
CDHR3-214ENST00000496633 IGLV5-39A0A0G2JS06 123 aa4.75□□□□□ -1.65
CDHR3-214ENST00000496633 DLEU1O43261 78 aa4.75□□□□□ -1.65
CDHR3-214ENST00000496633 NUPR1O60356 82 aa4.75□□□□□ -1.65
CDHR3-214ENST00000496633 PLNP26678 52 aa4.75□□□□□ -1.65
CDHR3-214ENST00000496633 TMEM170BQ5T4T1 132 aa4.75□□□□□ -1.65
CDHR3-214ENST00000496633 C2orf82Q6UX34 121 aa4.75□□□□□ -1.65
CDHR3-214ENST00000496633 PRO1933Q9H354 126 aa4.75□□□□□ -1.65
CDHR3-214ENST00000496633 TP73-AS1Q9UF72 201 aa4.75□□□□□ -1.65
CDHR3-214ENST00000496633 MYCBP2O75592 4640 aa4.75□□□□□ -1.65
CDHR3-214ENST00000496633 FLG2Q5D862 2391 aaPredicted RBP4.75□□□□□ -1.65
CDHR3-214ENST00000496633 A0A1W2PNN7 141 aa4.74□□□□□ -1.65
CDHR3-214ENST00000496633 H0Y8G0 127 aa4.74□□□□□ -1.65
CDHR3-214ENST00000496633 M0QXV9 152 aa4.74□□□□□ -1.65
CDHR3-214ENST00000496633 SPINK8P0C7L1 97 aa4.74□□□□□ -1.65
CDHR3-214ENST00000496633 ZNF22P17026 224 aaPredicted RBP4.74□□□□□ -1.65
CDHR3-214ENST00000496633 UBE2BP63146 152 aa4.74□□□□□ -1.65
CDHR3-214ENST00000496633 PMCHL1Q16048 86 aa4.74□□□□□ -1.65
CDHR3-214ENST00000496633 C11orf86A6NJI1 115 aa4.73□□□□□ -1.65
CDHR3-214ENST00000496633 SERF1AO75920 110 aa4.73□□□□□ -1.65
CDHR3-214ENST00000496633 HERVK_113P61574 105 aa4.73□□□□□ -1.65
CDHR3-214ENST00000496633 HERV-K104P63124 156 aa4.73□□□□□ -1.65
CDHR3-214ENST00000496633 RPL24P83731 157 aaKnown RBP4.73□□□□□ -1.65
CDHR3-214ENST00000496633 DIRC1Q969H9 104 aa4.73□□□□□ -1.65
CDHR3-214ENST00000496633 COL5A1-AS1Q5SY13 56 aa4.72□□□□□ -1.65
CDHR3-214ENST00000496633 FAM19A5Q7Z5A7 132 aaPredicted RBP4.72□□□□□ -1.65
CDHR3-214ENST00000496633 MAP1LC3CQ9BXW4 147 aa4.72□□□□□ -1.65
CDHR3-214ENST00000496633 UQCR10Q9UDW1 63 aa4.72□□□□□ -1.65
CDHR3-214ENST00000496633 PSORS1C2Q9UIG4 136 aa4.72□□□□□ -1.65
CDHR3-214ENST00000496633 TMEM223A0PJW6 202 aa4.71□□□□□ -1.66
CDHR3-214ENST00000496633 C1orf137Q5JT78 98 aa4.71□□□□□ -1.66
CDHR3-214ENST00000496633 C9orf129Q5T035 196 aaKnown RBP4.71□□□□□ -1.66
CDHR3-214ENST00000496633 GAGE2AQ6NT46 116 aa4.71□□□□□ -1.66
CDHR3-214ENST00000496633 PHF5AQ7RTV0 110 aaKnown RBP4.71□□□□□ -1.66
CDHR3-214ENST00000496633 MRPL55Q7Z7F7 128 aaKnown RBP4.71□□□□□ -1.66
CDHR3-214ENST00000496633 NKAPP1Q8N9T2 125 aa4.71□□□□□ -1.66
CDHR3-214ENST00000496633 VAMP8Q9BV40 100 aa4.71□□□□□ -1.66
CDHR3-214ENST00000496633 ERG28Q9UKR5 140 aa4.71□□□□□ -1.66
CDHR3-214ENST00000496633 IGLV5-37A0A075B6J1 123 aa4.7□□□□□ -1.66
CDHR3-214ENST00000496633 A0A0A0MQY5 61 aa4.7□□□□□ -1.66
CDHR3-214ENST00000496633 MYMXA0A1B0GTQ4 84 aa4.7□□□□□ -1.66
CDHR3-214ENST00000496633 DPM2O94777 84 aa4.7□□□□□ -1.66
CDHR3-214ENST00000496633 IGLV7-43P04211 117 aa4.7□□□□□ -1.66
CDHR3-214ENST00000496633 SRSF9Q13242 221 aaKnown RBP eCLIP4.7□□□□□ -1.66
CDHR3-214ENST00000496633 FAM19A2Q8N3H0 131 aa4.7□□□□□ -1.66
CDHR3-214ENST00000496633 PLEKHB2Q96CS7 222 aa4.7□□□□□ -1.66
CDHR3-214ENST00000496633 LINC01600Q96MT4 127 aa4.7□□□□□ -1.66
CDHR3-214ENST00000496633 XAGE1AQ9HD64 81 aa4.7□□□□□ -1.66
CDHR3-214ENST00000496633 C22orf24Q9Y442 160 aa4.7□□□□□ -1.66
CDHR3-214ENST00000496633 LORP23490 312 aaPredicted RBP4.69□□□□□ -1.66
CDHR3-214ENST00000496633 RPL28P46779 137 aaKnown RBP4.69□□□□□ -1.66
CDHR3-214ENST00000496633 NMUP48645 174 aa4.69□□□□□ -1.66
CDHR3-214ENST00000496633 ZNF625Q96I27 306 aaPredicted RBP4.69□□□□□ -1.66
CDHR3-214ENST00000496633 FAM168BA1KXE4 195 aa4.68□□□□□ -1.66
CDHR3-214ENST00000496633 IGKCP01834 107 aa4.68□□□□□ -1.66
CDHR3-214ENST00000496633 C3orf79P0CE67 100 aa4.68□□□□□ -1.66
CDHR3-214ENST00000496633 PFN2P35080 140 aa4.68□□□□□ -1.66
CDHR3-214ENST00000496633 HNRNPA3P51991 378 aaKnown RBP4.68□□□□□ -1.66
CDHR3-214ENST00000496633 CBY1Q9Y3M2 126 aa4.68□□□□□ -1.66
CDHR3-214ENST00000496633 H0Y9J4 135 aa4.67□□□□□ -1.66
CDHR3-214ENST00000496633 LEPROTO15243 131 aa4.67□□□□□ -1.66
CDHR3-214ENST00000496633 ZNF861PO60384 105 aa4.67□□□□□ -1.66
CDHR3-214ENST00000496633 LINC00158P58513 81 aa4.67□□□□□ -1.66
CDHR3-214ENST00000496633 MEIG1Q5JSS6 88 aa4.67□□□□□ -1.66
CDHR3-214ENST00000496633 SND1-IT1Q9HBX3 110 aa4.67□□□□□ -1.66
CDHR3-214ENST00000496633 NDUFA12Q9UI09 145 aa4.67□□□□□ -1.66
CDHR3-214ENST00000496633 IGKV2D-26A0A0A0MRZ7 120 aa4.66□□□□□ -1.66
CDHR3-214ENST00000496633 BCE1O60756 84 aa4.66□□□□□ -1.66
CDHR3-214ENST00000496633 LGALS3P17931 250 aaKnown RBP4.66□□□□□ -1.66
CDHR3-214ENST00000496633 RPL13AP40429 203 aaKnown RBP4.66□□□□□ -1.66
CDHR3-214ENST00000496633 UBE2V1Q13404 147 aa4.66□□□□□ -1.66
CDHR3-214ENST00000496633 SPATA45Q537H7 98 aa4.66□□□□□ -1.66
CDHR3-214ENST00000496633 HERC1Q15751 4861 aa4.66□□□□□ -1.66
CDHR3-214ENST00000496633 IGLV1-50A0A075B6I6 118 aa4.65□□□□□ -1.67
CDHR3-214ENST00000496633 SYS1-DBNDD2H3BUS1 97 aa4.65□□□□□ -1.67
CDHR3-214ENST00000496633 J3QQQ9 107 aa4.65□□□□□ -1.67
CDHR3-214ENST00000496633 LINC00167Q96N53 147 aa4.65□□□□□ -1.67
CDHR3-214ENST00000496633 PMCHL2Q9BQD1 86 aa4.65□□□□□ -1.67
CDHR3-214ENST00000496633 PAM16Q9Y3D7 125 aa4.65□□□□□ -1.67
CDHR3-214ENST00000496633 LINC01545Q5VT33 79 aa4.64□□□□□ -1.67
CDHR3-214ENST00000496633 KRTAP7-1Q8IUC3 87 aa4.64□□□□□ -1.67
CDHR3-214ENST00000496633 COPS9Q8WXC6 57 aa4.64□□□□□ -1.67
CDHR3-214ENST00000496633 LRP1Q07954 4544 aaKnown RBP4.63□□□□□ -1.67
CDHR3-214ENST00000496633 E9PLD3 99 aa4.63□□□□□ -1.67
CDHR3-214ENST00000496633 M0R378 163 aa4.63□□□□□ -1.67
CDHR3-214ENST00000496633 UBE2AP49459 152 aa4.63□□□□□ -1.67
CDHR3-214ENST00000496633 KRTDAPP60985 99 aa4.63□□□□□ -1.67
CDHR3-214ENST00000496633 LOC107984156A0A0G2JMH3 177 aa4.62□□□□□ -1.67
CDHR3-214ENST00000496633 SMIM13P0DJ93 91 aa4.62□□□□□ -1.67
CDHR3-214ENST00000496633 ARL17AQ8IVW1 177 aa4.62□□□□□ -1.67
CDHR3-214ENST00000496633 BOD1L2Q8IYS8 172 aa4.62□□□□□ -1.67
CDHR3-214ENST00000496633 MIR7-3HGQ8N6C7 128 aa4.62□□□□□ -1.67
CDHR3-214ENST00000496633 FAT3Q8TDW7 4589 aa4.62□□□□□ -1.67
CDHR3-214ENST00000496633 PKHD1L1Q86WI1 4243 aa4.61□□□□□ -1.67
CDHR3-214ENST00000496633 TRBV10-2A0A0K0K1G8 114 aa4.61□□□□□ -1.67
CDHR3-214ENST00000496633 KRTAP23-1A1A580 65 aa4.61□□□□□ -1.67
CDHR3-214ENST00000496633 RPL37AP8A6NKH3 93 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms