RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 HYDINQ4G0P3 5121 aa5.63□□□□□ -1.51
U2AF1-212ENST00000496462 IGKV2D-26A0A0A0MRZ7 120 aa5.63□□□□□ -1.51
U2AF1-212ENST00000496462 DLEU1O43261 78 aa5.63□□□□□ -1.51
U2AF1-212ENST00000496462 GAGE10A6NGK3 116 aa5.62□□□□□ -1.51
U2AF1-212ENST00000496462 RPL28P46779 137 aaKnown RBP5.62□□□□□ -1.51
U2AF1-212ENST00000496462 SPANXDQ9BXN6 97 aa5.62□□□□□ -1.51
U2AF1-212ENST00000496462 Q6ZRP5 223 aa5.61□□□□□ -1.51
U2AF1-212ENST00000496462 KIAA0087Q14695 138 aa5.61□□□□□ -1.51
U2AF1-212ENST00000496462 BATFQ16520 125 aa5.61□□□□□ -1.51
U2AF1-212ENST00000496462 KRTAP26-1Q6PEX3 210 aa5.61□□□□□ -1.51
U2AF1-212ENST00000496462 LYSTQ99698 3801 aa5.61□□□□□ -1.51
U2AF1-212ENST00000496462 TRBV10-2A0A0K0K1G8 114 aa5.6□□□□□ -1.51
U2AF1-212ENST00000496462 MRPL55Q7Z7F7 128 aaKnown RBP5.6□□□□□ -1.51
U2AF1-212ENST00000496462 MAPKAPK5-AS1Q8N8E1 139 aa5.6□□□□□ -1.51
U2AF1-212ENST00000496462 HIGD1BQ9P298 99 aa5.6□□□□□ -1.51
U2AF1-212ENST00000496462 TP73-AS1Q9UF72 201 aa5.6□□□□□ -1.51
U2AF1-212ENST00000496462 ZNF706Q9Y5V0 76 aaPredicted RBP5.6□□□□□ -1.51
U2AF1-212ENST00000496462 EPPK1P58107 5090 aaKnown RBP5.6□□□□□ -1.51
U2AF1-212ENST00000496462 A0A087WYN8 130 aa5.6□□□□□ -1.51
U2AF1-212ENST00000496462 ALMS1Q8TCU4 4167 aa5.6□□□□□ -1.51
U2AF1-212ENST00000496462 A0A096LNI7 61 aa5.6□□□□□ -1.51
U2AF1-212ENST00000496462 NCR3O14931 201 aa5.6□□□□□ -1.51
U2AF1-212ENST00000496462 NDUFC2O95298 119 aa5.6□□□□□ -1.51
U2AF1-212ENST00000496462 RPL37AP61513 92 aaKnown RBP5.6□□□□□ -1.51
U2AF1-212ENST00000496462 WFDC2Q14508 124 aa5.6□□□□□ -1.51
U2AF1-212ENST00000496462 H7C2G1 150 aa5.59□□□□□ -1.51
U2AF1-212ENST00000496462 DNAL4O96015 105 aa5.59□□□□□ -1.51
U2AF1-212ENST00000496462 C10orf25Q5T742 122 aa5.59□□□□□ -1.51
U2AF1-212ENST00000496462 PCP2Q8IVA1 136 aa5.59□□□□□ -1.51
U2AF1-212ENST00000496462 DIRC1Q969H9 104 aa5.59□□□□□ -1.51
U2AF1-212ENST00000496462 KMT2AQ03164 3969 aa5.59□□□□□ -1.51
U2AF1-212ENST00000496462 LINC00308Q8TCZ7 52 aa5.59□□□□□ -1.51
U2AF1-212ENST00000496462 FAM19A1Q7Z5A9 133 aa5.59□□□□□ -1.51
U2AF1-212ENST00000496462 SDIM1Q6ZPB5 146 aa5.58□□□□□ -1.52
U2AF1-212ENST00000496462 EPM2AB3EWF7 344 aa5.58□□□□□ -1.52
U2AF1-212ENST00000496462 LINC01620Q4KN68 170 aa5.58□□□□□ -1.52
U2AF1-212ENST00000496462 C22orf24Q9Y442 160 aa5.58□□□□□ -1.52
U2AF1-212ENST00000496462 C1orf137Q5JT78 98 aa5.58□□□□□ -1.52
U2AF1-212ENST00000496462 MUSTN1Q8IVN3 82 aa5.58□□□□□ -1.52
U2AF1-212ENST00000496462 DAND5Q8N907 189 aa5.58□□□□□ -1.52
U2AF1-212ENST00000496462 F8WEM9 126 aa5.57□□□□□ -1.52
U2AF1-212ENST00000496462 BVES-AS1Q5T3Y7 98 aa5.57□□□□□ -1.52
U2AF1-212ENST00000496462 REG3GQ6UW15 175 aa5.57□□□□□ -1.52
U2AF1-212ENST00000496462 PRYO14603 147 aa5.57□□□□□ -1.52
U2AF1-212ENST00000496462 PLA2G2DQ9UNK4 145 aa5.57□□□□□ -1.52
U2AF1-212ENST00000496462 CHTF8P0CG12 524 aa5.57□□□□□ -1.52
U2AF1-212ENST00000496462 KRTAP10-2P60368 255 aa5.57□□□□□ -1.52
U2AF1-212ENST00000496462 DNAH1Q9P2D7 4330 aa5.56□□□□□ -1.52
U2AF1-212ENST00000496462 CDK2AP2O75956 126 aa5.56□□□□□ -1.52
U2AF1-212ENST00000496462 FAM104AQ969W3 186 aa5.56□□□□□ -1.52
U2AF1-212ENST00000496462 LINC00528Q8N1L1 170 aa5.55□□□□□ -1.52
U2AF1-212ENST00000496462 COX7BP24311 80 aa5.55□□□□□ -1.52
U2AF1-212ENST00000496462 TRAV23DV6A0A075B6W5 121 aa5.55□□□□□ -1.52
U2AF1-212ENST00000496462 H0YGX0 51 aa5.55□□□□□ -1.52
U2AF1-212ENST00000496462 RPL13AP40429 203 aaKnown RBP5.55□□□□□ -1.52
U2AF1-212ENST00000496462 BIRC6Q9NR09 4857 aa5.54□□□□□ -1.52
U2AF1-212ENST00000496462 IGKV2-28A0A075B6P5 120 aa5.54□□□□□ -1.52
U2AF1-212ENST00000496462 IGKV2D-28P01615 120 aa5.54□□□□□ -1.52
U2AF1-212ENST00000496462 TSPEAR-AS2P59090 65 aa5.54□□□□□ -1.52
U2AF1-212ENST00000496462 SCXQ7RTU7 201 aa5.54□□□□□ -1.52
U2AF1-212ENST00000496462 SPACA4Q8TDM5 124 aa5.54□□□□□ -1.52
U2AF1-212ENST00000496462 HIGD2AQ9BW72 106 aa5.54□□□□□ -1.52
U2AF1-212ENST00000496462 TTTY13Q9BZ97 58 aa5.54□□□□□ -1.52
U2AF1-212ENST00000496462 PLAC8Q9NZF1 115 aa5.54□□□□□ -1.52
U2AF1-212ENST00000496462 H3BQ85 93 aa5.54□□□□□ -1.52
U2AF1-212ENST00000496462 C4orf48Q5BLP8 95 aa5.54□□□□□ -1.52
U2AF1-212ENST00000496462 CEND1Q8N111 149 aa5.54□□□□□ -1.52
U2AF1-212ENST00000496462 DHRS4-AS1Q9P1J3 65 aa5.54□□□□□ -1.52
U2AF1-212ENST00000496462 KRTAP10-1P60331 282 aa5.54□□□□□ -1.52
U2AF1-212ENST00000496462 PRO1854Q9UHT4 67 aa5.54□□□□□ -1.52
U2AF1-212ENST00000496462 LOC107984156A0A0G2JMH3 177 aa5.53□□□□□ -1.52
U2AF1-212ENST00000496462 RPL37AP8A6NKH3 93 aa5.53□□□□□ -1.52
U2AF1-212ENST00000496462 FUSP35637 526 aaKnown RBP eCLIP5.53□□□□□ -1.52
U2AF1-212ENST00000496462 ARL17AQ8IVW1 177 aa5.53□□□□□ -1.52
U2AF1-212ENST00000496462 LINC00167Q96N53 147 aa5.53□□□□□ -1.52
U2AF1-212ENST00000496462 A0A1B0GWB2 263 aa5.53□□□□□ -1.52
U2AF1-212ENST00000496462 PHF5AQ7RTV0 110 aaKnown RBP5.52□□□□□ -1.53
U2AF1-212ENST00000496462 PPDPFQ9H3Y8 114 aa5.52□□□□□ -1.53
U2AF1-212ENST00000496462 CIRBP-AS1Q8TBR5 109 aa5.52□□□□□ -1.53
U2AF1-212ENST00000496462 VPS13DQ5THJ4 4388 aa5.51□□□□□ -1.53
U2AF1-212ENST00000496462 ZNF73O43830 326 aaPredicted RBP5.51□□□□□ -1.53
U2AF1-212ENST00000496462 SMR3BP02814 79 aaPredicted RBP5.51□□□□□ -1.53
U2AF1-212ENST00000496462 IGLV5-37A0A075B6J1 123 aa5.51□□□□□ -1.53
U2AF1-212ENST00000496462 BCE1O60756 84 aa5.5□□□□□ -1.53
U2AF1-212ENST00000496462 SLPIP03973 132 aa5.5□□□□□ -1.53
U2AF1-212ENST00000496462 INAFM2P0DMQ5 153 aa5.5□□□□□ -1.53
U2AF1-212ENST00000496462 A0A0B4J2C4 111 aa5.5□□□□□ -1.53
U2AF1-212ENST00000496462 TRBV10-3A0A0K0K1G6 114 aa5.5□□□□□ -1.53
U2AF1-212ENST00000496462 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.5□□□□□ -1.53
U2AF1-212ENST00000496462 FRAS1Q86XX4 4008 aa5.5□□□□□ -1.53
U2AF1-212ENST00000496462 VPREB1P12018 145 aa5.49□□□□□ -1.53
U2AF1-212ENST00000496462 LAMTOR3Q9UHA4 124 aa5.49□□□□□ -1.53
U2AF1-212ENST00000496462 CFC1BP0CG36 223 aa5.49□□□□□ -1.53
U2AF1-212ENST00000496462 CFC1P0CG37 223 aa5.49□□□□□ -1.53
U2AF1-212ENST00000496462 C9orf129Q5T035 196 aaKnown RBP5.49□□□□□ -1.53
U2AF1-212ENST00000496462 A0A1B0GVY2 172 aa5.48□□□□□ -1.53
U2AF1-212ENST00000496462 TSPAN13O95857 204 aa5.48□□□□□ -1.53
U2AF1-212ENST00000496462 OCIAD2Q56VL3 154 aa5.48□□□□□ -1.53
U2AF1-212ENST00000496462 FABP2P12104 132 aa5.48□□□□□ -1.53
U2AF1-212ENST00000496462 COL5A1-AS1Q5SY13 56 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms