RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, human

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-223	ENST00000496024	SND1-IT1	Q9HBX3	110 aa		6.06	□□□□□ -1.44
CALD1-223	ENST00000496024	MYMX	A0A1B0GTQ4	84 aa		6.05	□□□□□ -1.44
CALD1-223	ENST00000496024		J3QQQ9	107 aa		6.05	□□□□□ -1.44
CALD1-223	ENST00000496024	LBH	Q53QV2	105 aa	Predicted RBP	6.05	□□□□□ -1.44
CALD1-223	ENST00000496024	PET117	Q6UWS5	81 aa		6.05	□□□□□ -1.44
CALD1-223	ENST00000496024	MRPL55	Q7Z7F7	128 aa	Known RBP	6.05	□□□□□ -1.44
CALD1-223	ENST00000496024	NKAPP1	Q8N9T2	125 aa		6.05	□□□□□ -1.44
CALD1-223	ENST00000496024	HERC1	Q15751	4861 aa		6.04	□□□□□ -1.44
CALD1-223	ENST00000496024	RPL37AP8	A6NKH3	93 aa		6.04	□□□□□ -1.44
CALD1-223	ENST00000496024	LGALS3	P17931	250 aa	Known RBP	6.04	□□□□□ -1.44
CALD1-223	ENST00000496024	HERV-K104	P63124	156 aa		6.04	□□□□□ -1.44
CALD1-223	ENST00000496024	LINC01545	Q5VT33	79 aa		6.04	□□□□□ -1.44
CALD1-223	ENST00000496024	LINC00167	Q96N53	147 aa		6.04	□□□□□ -1.44
CALD1-223	ENST00000496024	KRTAP29-1	A8MX34	341 aa	Predicted RBP	6.03	□□□□□ -1.44
CALD1-223	ENST00000496024	LCE2B	O14633	110 aa		6.03	□□□□□ -1.44
CALD1-223	ENST00000496024	IGLV7-43	P04211	117 aa		6.03	□□□□□ -1.44
CALD1-223	ENST00000496024	S100A6	P06703	90 aa		6.03	□□□□□ -1.44
CALD1-223	ENST00000496024	MIR7-3HG	Q8N6C7	128 aa		6.03	□□□□□ -1.44
CALD1-223	ENST00000496024	TP73-AS1	Q9UF72	201 aa		6.03	□□□□□ -1.44
CALD1-223	ENST00000496024	PLA2G2D	Q9UNK4	145 aa		6.03	□□□□□ -1.44
CALD1-223	ENST00000496024	OXT	P01178	125 aa		6.02	□□□□□ -1.45
CALD1-223	ENST00000496024	S100A2	P29034	98 aa		6.02	□□□□□ -1.45
CALD1-223	ENST00000496024	RPL24	P83731	157 aa	Known RBP	6.02	□□□□□ -1.45
CALD1-223	ENST00000496024	SRSF9	Q13242	221 aa	Known RBP eCLIP	6.02	□□□□□ -1.45
CALD1-223	ENST00000496024	SPINK6	Q6UWN8	80 aa		6.02	□□□□□ -1.45
CALD1-223	ENST00000496024		Q8NDZ9	215 aa		6.02	□□□□□ -1.45
CALD1-223	ENST00000496024	IGLV5-37	A0A075B6J1	123 aa		6.01	□□□□□ -1.45
CALD1-223	ENST00000496024	IGKV2-28	A0A075B6P5	120 aa		6.01	□□□□□ -1.45
CALD1-223	ENST00000496024	C20orf202	A1L168	122 aa		6.01	□□□□□ -1.45
CALD1-223	ENST00000496024	LINC00587	B1AMM8	73 aa		6.01	□□□□□ -1.45
CALD1-223	ENST00000496024		E9PLD3	99 aa		6.01	□□□□□ -1.45
CALD1-223	ENST00000496024	IGKV2D-28	P01615	120 aa		6.01	□□□□□ -1.45
CALD1-223	ENST00000496024	VPREB1	P12018	145 aa		6.01	□□□□□ -1.45
CALD1-223	ENST00000496024	ATOH7	Q8N100	152 aa		6.01	□□□□□ -1.45
CALD1-223	ENST00000496024	HIST3H2BB	Q8N257	126 aa		6.01	□□□□□ -1.45
CALD1-223	ENST00000496024	DAND5	Q8N907	189 aa		6.01	□□□□□ -1.45
CALD1-223	ENST00000496024	NMU	P48645	174 aa		6	□□□□□ -1.45
CALD1-223	ENST00000496024	BOD1L2	Q8IYS8	172 aa		6	□□□□□ -1.45
CALD1-223	ENST00000496024	HIST1H2BL	Q99880	126 aa		6	□□□□□ -1.45
CALD1-223	ENST00000496024	SNRPE	P62304	92 aa	Known RBP	5.99	□□□□□ -1.45
CALD1-223	ENST00000496024	REG3G	Q6UW15	175 aa		5.99	□□□□□ -1.45
CALD1-223	ENST00000496024	TTTY13	Q9BZ97	58 aa		5.99	□□□□□ -1.45
CALD1-223	ENST00000496024	TNXB	P22105	4242 aa		5.98	□□□□□ -1.45
CALD1-223	ENST00000496024	IGKV2D-26	A0A0A0MRZ7	120 aa		5.98	□□□□□ -1.45
CALD1-223	ENST00000496024	NCR3	O14931	201 aa		5.98	□□□□□ -1.45
CALD1-223	ENST00000496024	NPC2	P61916	151 aa		5.98	□□□□□ -1.45
CALD1-223	ENST00000496024	DIRC1	Q969H9	104 aa		5.98	□□□□□ -1.45
CALD1-223	ENST00000496024		A0A0J9YXY3	114 aa		5.97	□□□□□ -1.45
CALD1-223	ENST00000496024	ZNF815P	A8K554	130 aa		5.97	□□□□□ -1.45
CALD1-223	ENST00000496024	BCE1	O60756	84 aa		5.97	□□□□□ -1.45
CALD1-223	ENST00000496024	ANKRD39	Q53RE8	183 aa		5.97	□□□□□ -1.45
CALD1-223	ENST00000496024	IGLV1-50	A0A075B6I6	118 aa		5.96	□□□□□ -1.46
CALD1-223	ENST00000496024	TMEM238	C9JI98	176 aa		5.96	□□□□□ -1.46
CALD1-223	ENST00000496024		H0Y9J4	135 aa		5.96	□□□□□ -1.46
CALD1-223	ENST00000496024		M0R378	163 aa		5.96	□□□□□ -1.46
CALD1-223	ENST00000496024	ZNF861P	O60384	105 aa		5.96	□□□□□ -1.46
CALD1-223	ENST00000496024	MT1HL1	P0DM35	61 aa		5.96	□□□□□ -1.46
CALD1-223	ENST00000496024	SMCP	P49901	116 aa	Predicted RBP	5.96	□□□□□ -1.46
CALD1-223	ENST00000496024	ADAMTSL4-AS1	Q5T5F5	129 aa		5.96	□□□□□ -1.46
CALD1-223	ENST00000496024	MIEN1	Q9BRT3	115 aa		5.96	□□□□□ -1.46
CALD1-223	ENST00000496024	RPL28	P46779	137 aa	Known RBP	5.95	□□□□□ -1.46
CALD1-223	ENST00000496024	UBE2A	P49459	152 aa		5.95	□□□□□ -1.46
CALD1-223	ENST00000496024	LINC01600	Q96MT4	127 aa		5.95	□□□□□ -1.46
CALD1-223	ENST00000496024	AKR1D1	P51857	326 aa		5.94	□□□□□ -1.46
CALD1-223	ENST00000496024	FAM19A1	Q7Z5A9	133 aa		5.94	□□□□□ -1.46
CALD1-223	ENST00000496024	TMEM126A	Q9H061	195 aa		5.94	□□□□□ -1.46
CALD1-223	ENST00000496024	C5orf52	A6NGY3	159 aa		5.93	□□□□□ -1.46
CALD1-223	ENST00000496024	EIF4EBP3	O60516	100 aa	Predicted RBP	5.93	□□□□□ -1.46
CALD1-223	ENST00000496024	SCGB1D1	O95968	90 aa		5.93	□□□□□ -1.46
CALD1-223	ENST00000496024	PRLH	P81277	87 aa		5.93	□□□□□ -1.46
CALD1-223	ENST00000496024	SOSTDC1	Q6X4U4	206 aa		5.93	□□□□□ -1.46
CALD1-223	ENST00000496024	LOC107984156	A0A0G2JMH3	177 aa		5.92	□□□□□ -1.46
CALD1-223	ENST00000496024	TRBV10-3	A0A0K0K1G6	114 aa		5.92	□□□□□ -1.46
CALD1-223	ENST00000496024	SCGB1D4	Q6XE38	83 aa		5.92	□□□□□ -1.46
CALD1-223	ENST00000496024	PCP2	Q8IVA1	136 aa		5.92	□□□□□ -1.46
CALD1-223	ENST00000496024	ARL17A	Q8IVW1	177 aa		5.92	□□□□□ -1.46
CALD1-223	ENST00000496024	PRR26	Q8N8Z3	221 aa		5.92	□□□□□ -1.46
CALD1-223	ENST00000496024	LITAF	Q99732	161 aa		5.92	□□□□□ -1.46
CALD1-223	ENST00000496024	TMA7	Q9Y2S6	64 aa	Known RBP	5.92	□□□□□ -1.46
CALD1-223	ENST00000496024	HSBP1L1	C9JCN9	74 aa		5.91	□□□□□ -1.46
CALD1-223	ENST00000496024	TIMM17B	O60830	172 aa		5.91	□□□□□ -1.46
CALD1-223	ENST00000496024	LINC00308	Q8TCZ7	52 aa		5.91	□□□□□ -1.46
CALD1-223	ENST00000496024	PRY	O14603	147 aa		5.9	□□□□□ -1.46
CALD1-223	ENST00000496024	KRTAP1-4	P0C5Y4	121 aa		5.9	□□□□□ -1.46
CALD1-223	ENST00000496024	DDT	P30046	118 aa		5.9	□□□□□ -1.46
CALD1-223	ENST00000496024	KRTAP10-8	P60410	259 aa		5.9	□□□□□ -1.46
CALD1-223	ENST00000496024	S100A7L2	Q5SY68	101 aa		5.9	□□□□□ -1.46
CALD1-223	ENST00000496024	KRTAP13-1	Q8IUC0	172 aa		5.9	□□□□□ -1.46
CALD1-223	ENST00000496024	SPANXB1	Q9NS25	103 aa	Predicted RBP	5.9	□□□□□ -1.46
CALD1-223	ENST00000496024	TRBV10-2	A0A0K0K1G8	114 aa		5.89	□□□□□ -1.47
CALD1-223	ENST00000496024	NDUFC2	O95298	119 aa		5.89	□□□□□ -1.47
CALD1-223	ENST00000496024	S100A12	P80511	92 aa		5.89	□□□□□ -1.47
CALD1-223	ENST00000496024	HIGD2A	Q9BW72	106 aa		5.89	□□□□□ -1.47
CALD1-223	ENST00000496024	ETDC	A0A1B0GVM5	59 aa		5.88	□□□□□ -1.47
CALD1-223	ENST00000496024	C4orf48	Q5BLP8	95 aa		5.88	□□□□□ -1.47
CALD1-223	ENST00000496024	OR13C6P	Q8NH95	151 aa		5.88	□□□□□ -1.47
CALD1-223	ENST00000496024	KCNQ1DN	Q9H478	68 aa		5.88	□□□□□ -1.47
CALD1-223	ENST00000496024	ANAPC11	Q9NYG5	84 aa		5.88	□□□□□ -1.47
CALD1-223	ENST00000496024	SPANXD	Q9BXN6	97 aa		5.87	□□□□□ -1.47
CALD1-223	ENST00000496024	SPANXC	Q9NY87	97 aa		5.87	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms