RNA–Protein interactions for RNA: ENST00000495988.1

APOBEC3A-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 4

Gene APOBEC3A, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-204ENST00000495988 LINC00310P59036 64 aa9.99□□□□□ -0.81
APOBEC3A-204ENST00000495988 HIST1H2BCP62807 126 aa9.99□□□□□ -0.81
APOBEC3A-204ENST00000495988 HIST2H2BEQ16778 126 aa9.99□□□□□ -0.81
APOBEC3A-204ENST00000495988 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.99□□□□□ -0.81
APOBEC3A-204ENST00000495988 KRTAP13-1Q8IUC0 172 aa9.99□□□□□ -0.81
APOBEC3A-204ENST00000495988 HIST1H2BHQ93079 126 aa9.99□□□□□ -0.81
APOBEC3A-204ENST00000495988 ZNF625Q96I27 306 aaPredicted RBP9.99□□□□□ -0.81
APOBEC3A-204ENST00000495988 HIST1H2BNQ99877 126 aa9.99□□□□□ -0.81
APOBEC3A-204ENST00000495988 HIST1H2BMQ99879 126 aa9.99□□□□□ -0.81
APOBEC3A-204ENST00000495988 SND1-IT1Q9HBX3 110 aa9.99□□□□□ -0.81
APOBEC3A-204ENST00000495988 ANAPC11Q9NYG5 84 aa9.99□□□□□ -0.81
APOBEC3A-204ENST00000495988 C11orf86A6NJI1 115 aa9.98□□□□□ -0.81
APOBEC3A-204ENST00000495988 VPREB1P12018 145 aa9.98□□□□□ -0.81
APOBEC3A-204ENST00000495988 COX17Q14061 63 aa9.98□□□□□ -0.81
APOBEC3A-204ENST00000495988 TMEM170BQ5T4T1 132 aa9.98□□□□□ -0.81
APOBEC3A-204ENST00000495988 IFI27L1Q96BM0 104 aa9.98□□□□□ -0.81
APOBEC3A-204ENST00000495988 RPL24P83731 157 aaKnown RBP9.97□□□□□ -0.81
APOBEC3A-204ENST00000495988 PRLHP81277 87 aa9.96□□□□□ -0.82
APOBEC3A-204ENST00000495988 LEPROTL1O95214 131 aa9.95□□□□□ -0.82
APOBEC3A-204ENST00000495988 SFTA2Q6UW10 78 aa9.95□□□□□ -0.82
APOBEC3A-204ENST00000495988 FAM19A1Q7Z5A9 133 aa9.95□□□□□ -0.82
APOBEC3A-204ENST00000495988 TMEM126AQ9H061 195 aa9.95□□□□□ -0.82
APOBEC3A-204ENST00000495988 CHTOPQ9Y3Y2 248 aaKnown RBP9.95□□□□□ -0.82
APOBEC3A-204ENST00000495988 TMEM238C9JI98 176 aa9.94□□□□□ -0.82
APOBEC3A-204ENST00000495988 KRTAP13-2Q52LG2 175 aa9.94□□□□□ -0.82
APOBEC3A-204ENST00000495988 HSPB8Q9UJY1 196 aa9.94□□□□□ -0.82
APOBEC3A-204ENST00000495988 TRAV12-1A0A0B4J245 112 aa9.93□□□□□ -0.82
APOBEC3A-204ENST00000495988 FAM229BQ4G0N7 80 aa9.93□□□□□ -0.82
APOBEC3A-204ENST00000495988 Q8NDZ9 215 aa9.92□□□□□ -0.82
APOBEC3A-204ENST00000495988 H0Y8G0 127 aa9.91□□□□□ -0.82
APOBEC3A-204ENST00000495988 M0R378 163 aa9.91□□□□□ -0.82
APOBEC3A-204ENST00000495988 FABP4P15090 132 aa9.91□□□□□ -0.82
APOBEC3A-204ENST00000495988 LINC00158P58513 81 aa9.91□□□□□ -0.82
APOBEC3A-204ENST00000495988 IGKV2D-26A0A0A0MRZ7 120 aa9.89□□□□□ -0.83
APOBEC3A-204ENST00000495988 A0A0U1RRA0 63 aa9.89□□□□□ -0.83
APOBEC3A-204ENST00000495988 TMEM223A0PJW6 202 aa9.89□□□□□ -0.83
APOBEC3A-204ENST00000495988 LINC00304Q8N9R0 145 aa9.89□□□□□ -0.83
APOBEC3A-204ENST00000495988 COA6Q5JTJ3 125 aaKnown RBP9.88□□□□□ -0.83
APOBEC3A-204ENST00000495988 PLEKHB2Q96CS7 222 aa9.86□□□□□ -0.83
APOBEC3A-204ENST00000495988 RETNLBQ9BQ08 111 aa9.86□□□□□ -0.83
APOBEC3A-204ENST00000495988 MAP1LC3CQ9BXW4 147 aa9.86□□□□□ -0.83
APOBEC3A-204ENST00000495988 MEIG1Q5JSS6 88 aa9.85□□□□□ -0.83
APOBEC3A-204ENST00000495988 HIGD2AQ9BW72 106 aa9.85□□□□□ -0.83
APOBEC3A-204ENST00000495988 SMIM13P0DJ93 91 aa9.84□□□□□ -0.83
APOBEC3A-204ENST00000495988 PLNP26678 52 aa9.83□□□□□ -0.84
APOBEC3A-204ENST00000495988 DPM2O94777 84 aa9.82□□□□□ -0.84
APOBEC3A-204ENST00000495988 BOD1L2Q8IYS8 172 aa9.82□□□□□ -0.84
APOBEC3A-204ENST00000495988 MUC2Q02817 5179 aa9.81□□□□□ -0.84
APOBEC3A-204ENST00000495988 HERV-K104P63124 156 aa9.81□□□□□ -0.84
APOBEC3A-204ENST00000495988 C3orf22Q8N5N4 141 aa9.81□□□□□ -0.84
APOBEC3A-204ENST00000495988 MIR7-3HGQ8N6C7 128 aa9.81□□□□□ -0.84
APOBEC3A-204ENST00000495988 SYS1-DBNDD2H3BUS1 97 aa9.8□□□□□ -0.84
APOBEC3A-204ENST00000495988 NCR3O14931 201 aa9.8□□□□□ -0.84
APOBEC3A-204ENST00000495988 PMCHL2Q9BQD1 86 aa9.8□□□□□ -0.84
APOBEC3A-204ENST00000495988 PRYO14603 147 aa9.79□□□□□ -0.84
APOBEC3A-204ENST00000495988 IGKCP01834 107 aa9.79□□□□□ -0.84
APOBEC3A-204ENST00000495988 CTAG1AP78358 180 aa9.79□□□□□ -0.84
APOBEC3A-204ENST00000495988 SPRR4Q96PI1 79 aa9.79□□□□□ -0.84
APOBEC3A-204ENST00000495988 NDUFA12Q9UI09 145 aa9.79□□□□□ -0.84
APOBEC3A-204ENST00000495988 LINC00587B1AMM8 73 aa9.78□□□□□ -0.84
APOBEC3A-204ENST00000495988 S100A6P06703 90 aa9.78□□□□□ -0.84
APOBEC3A-204ENST00000495988 HERVK_113P61574 105 aa9.78□□□□□ -0.84
APOBEC3A-204ENST00000495988 A0A0U1RQV1 116 aa9.77□□□□□ -0.85
APOBEC3A-204ENST00000495988 MYMXA0A1B0GTQ4 84 aa9.77□□□□□ -0.85
APOBEC3A-204ENST00000495988 KRTDAPP60985 99 aa9.77□□□□□ -0.85
APOBEC3A-204ENST00000495988 PET117Q6UWS5 81 aa9.77□□□□□ -0.85
APOBEC3A-204ENST00000495988 ZNF706Q9Y5V0 76 aaPredicted RBP9.77□□□□□ -0.85
APOBEC3A-204ENST00000495988 C3orf79P0CE67 100 aa9.76□□□□□ -0.85
APOBEC3A-204ENST00000495988 S100A2P29034 98 aa9.76□□□□□ -0.85
APOBEC3A-204ENST00000495988 IGLV7-46A0A075B6I9 117 aa9.75□□□□□ -0.85
APOBEC3A-204ENST00000495988 SPRR1AP35321 89 aa9.75□□□□□ -0.85
APOBEC3A-204ENST00000495988 LINC01545Q5VT33 79 aa9.75□□□□□ -0.85
APOBEC3A-204ENST00000495988 LINC00337Q8N6G1 96 aa9.75□□□□□ -0.85
APOBEC3A-204ENST00000495988 CDIP1Q9H305 208 aa9.75□□□□□ -0.85
APOBEC3A-204ENST00000495988 KCNQ1DNQ9H478 68 aa9.75□□□□□ -0.85
APOBEC3A-204ENST00000495988 TRBV10-3A0A0K0K1G6 114 aa9.74□□□□□ -0.85
APOBEC3A-204ENST00000495988 ETDCA0A1B0GVM5 59 aa9.74□□□□□ -0.85
APOBEC3A-204ENST00000495988 C20orf202A1L168 122 aa9.74□□□□□ -0.85
APOBEC3A-204ENST00000495988 TPRXLQ17RH7 258 aa9.74□□□□□ -0.85
APOBEC3A-204ENST00000495988 SPAG11AQ6PDA7 123 aa9.74□□□□□ -0.85
APOBEC3A-204ENST00000495988 HIST3H2BBQ8N257 126 aa9.74□□□□□ -0.85
APOBEC3A-204ENST00000495988 LEPROTO15243 131 aa9.73□□□□□ -0.85
APOBEC3A-204ENST00000495988 TSPEAR-AS2P59090 65 aa9.73□□□□□ -0.85
APOBEC3A-204ENST00000495988 SMCR5Q8TEV8 140 aa9.73□□□□□ -0.85
APOBEC3A-204ENST00000495988 KRTAP4-16G5E9R7 235 aaPredicted RBP9.72□□□□□ -0.85
APOBEC3A-204ENST00000495988 S100A12P80511 92 aa9.72□□□□□ -0.85
APOBEC3A-204ENST00000495988 DAND5Q8N907 189 aa9.72□□□□□ -0.85
APOBEC3A-204ENST00000495988 C4orf48Q5BLP8 95 aa9.71□□□□□ -0.86
APOBEC3A-204ENST00000495988 HIST1H2BLQ99880 126 aa9.71□□□□□ -0.86
APOBEC3A-204ENST00000495988 PPDPFQ9H3Y8 114 aa9.71□□□□□ -0.86
APOBEC3A-204ENST00000495988 LOC107984156A0A0G2JMH3 177 aa9.69□□□□□ -0.86
APOBEC3A-204ENST00000495988 J3QQQ9 107 aa9.69□□□□□ -0.86
APOBEC3A-204ENST00000495988 LGALS3P17931 250 aaKnown RBP9.69□□□□□ -0.86
APOBEC3A-204ENST00000495988 ARL17AQ8IVW1 177 aa9.69□□□□□ -0.86
APOBEC3A-204ENST00000495988 Q8NBF4 154 aa9.69□□□□□ -0.86
APOBEC3A-204ENST00000495988 DDTP30046 118 aa9.68□□□□□ -0.86
APOBEC3A-204ENST00000495988 AKR1D1P51857 326 aa9.68□□□□□ -0.86
APOBEC3A-204ENST00000495988 SNRPEP62304 92 aaKnown RBP9.68□□□□□ -0.86
APOBEC3A-204ENST00000495988 TRBV10-2A0A0K0K1G8 114 aa9.67□□□□□ -0.86
APOBEC3A-204ENST00000495988 B5MCH6 92 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms